Pper003209.1
Basic Information
- Insect
- Pocota personata
- Gene Symbol
- SNAPC4
- Assembly
- GCA_963082735.1
- Location
- OY720429.1:42843580-42848772[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.14 5.4e+02 2.5 0.1 11 46 220 261 218 261 0.78 2 5 8e-11 3e-07 32.1 0.1 1 44 267 311 267 313 0.94 3 5 2.7e-14 1e-10 43.2 0.2 2 43 323 368 322 369 0.95 4 5 3.9e-11 1.5e-07 33.1 0.0 2 44 378 421 377 423 0.89 5 5 1.4e-13 5.4e-10 40.9 0.2 3 43 431 472 430 474 0.96
Sequence Information
- Coding Sequence
- ATGGATAGTATAGAAAAAGATTCTGAATTTTCAGCACACGAAGATGACAGTGAATGCGAGTCATCTGGTACTGATGAGAGCTACATTAATGAAGATACCGATGAAGGCGATAGTGAACATGACGATGGAAACTATACCGACCATACAGACTTCTTGGAAGGTGTAGACTTTGATTACATGGCGGAAGCGGTGAAACTCCTGGAAAATCATGCCGAAGTCAGCACAGATAATGCTCTTGCCCTTAATCGCAGCTTACAGGATATGCTGGAAACACTTCGCCGTATAATCGTTTCGATGCTCAATAAATGTCGCGAGAAATACATAGAGAATCAGGCGAAGCTGTCCAATCCCGCACCTGTATCGTCACTGCTGAAAGGTATCGGTAGTTGTGGGACACCATTCTTTAAGGACGCTCACGGTAGACCTTGTCCACAGAATGAGGACTACATACATCGCAGTGAATTTGAAAAGGAACTGTTTCCGAGTGACTTGGAATTGTATCCACACTTTGTTTGGACGGCAAAAGATAAACTAGGAATCTTACAGGGCATCAAAGAGCAGGCCATCGAGCATGTGGAACGTAAGGAATCCTACCCATCGACCAGTTCGGGTAAGAAATCATCTACACTGAGCAAAAATGTGAAGCTCCACTCGCTGAAGCTAACCGATTTACTGAATAAAGTCGACAATGATTTctccatcgattggaaccaaaTATCCATTTACAATCTAAAGTCTCGACATACCGCGAATAGTTGCTATGCAATTTGGAATGTATACCTCAAGCCGGAGATAAATCGTGACGAATGGACGGAGGAAGAAAACGTTAAATTGAACAATCTCGCGAAGAAGTATAAATTTCAAGATTGGATAGCCATAGCTGCTGAAATGAAGGGAAGATCAGACTATCAGTGCTTTGTTCAATACCAGACAGTAGTGGCGTTGAAAATGCGAGAAGATAAAGGCGAACGGTGGACGAGGGAGGAGGATGAACTACTGCTGACTTTGGTTGAAAAACACCGAATGGGAAATGTGATACGCTGGAATCCGATCTGTTCACAGCTACCCAATCGCACGAAGAAACAGTGCTTCGCACGATATAAATACAGTATCAACCCAAATATACTGAgagCACCATTTACGCCCGAGGAAGACTGCATCATTCTAGCCGCCGTTGAGGAGTACGGtgaaaattttaattgcttCCCCAAAGCGCTCTTCCCCAATCGAACAGTAGTCCAAATACGCAATAGATACTACAACTCCATAAAAGTCCGTGATACTATCCGCAACTGGACACCGGGAGACGATAAAATCCTTCTCAATCTCGTAGCCAAGCATGGCAATCATGATTGGAAGAAAATCTCCGGTGAAATTAAAAGACACTCTCGAACCAGTTGTCGCACACGTTTCTATGTGATATCAAAATTTCTGAAAGAAAATCCCAATGCCACCGTTAACGATTTGCCAAGGAAAAATCGTGGTCCGCTATCGACTGTAACGAAACGTAACTGGatgaaaaaaattgcagaaataaaaaaaaatccaagtgaAAATGTAGGCGAGAAGGGAGTCTGCAAAAAAGAATGCTACCGAGTGCGATTACGAAAAAACGAACTGGATTGGTACAATTATTTGAAGTTTTCCTACGACTTTACATTCGGCAAATGTTTCAGCAGAGTTCCAGAATCTATAAAGGGCCTTGAGTTTGTGAGATCTGTCTTTGATATGCAGCTGCAATTGCCCATCACATTAGATAAGCCTTATACCAATGGGGTAGTGCGAGTAAGTTTTGAGAAACTCATACGGACGCTTGCACAGAATAACAATTTTATGGTTAATGATACGCCCCATGTTTGGTATAGACTTCCACCGAATTATTGCACACTGCTCGCCTTTCGTGGACTTTGCATACAGACTTCATTCAATCAAGACAAATCTGCTGCAATTGTTGTAAAAGAGCAGGATGTTGTGGTTGAGGCTAAGAAAAAGTTTCGCCAACGACTTGTGAGTCTCCTTTATAAAACCACTCTACTGAGCCGTTTGGAACCCCGGAGTGTTGTGGAAAGAAATCATTTTCAAGTACTCTTCGATCCAAACACGCGATTAGGTCAAATCGCCAGTAAAAGTTTGGCAGAGCTTAAGACTgctcaaatgaataaaatcgcagaaaatctcaaaatcgcCACACAAAAAGCTAAGAGAAAACTGAAAACGCAGTCAAACAATTCATCAACGCCACCACCAGCGTGCAAAAAACTAAAAtccgaattaaaataa
- Protein Sequence
- MDSIEKDSEFSAHEDDSECESSGTDESYINEDTDEGDSEHDDGNYTDHTDFLEGVDFDYMAEAVKLLENHAEVSTDNALALNRSLQDMLETLRRIIVSMLNKCREKYIENQAKLSNPAPVSSLLKGIGSCGTPFFKDAHGRPCPQNEDYIHRSEFEKELFPSDLELYPHFVWTAKDKLGILQGIKEQAIEHVERKESYPSTSSGKKSSTLSKNVKLHSLKLTDLLNKVDNDFSIDWNQISIYNLKSRHTANSCYAIWNVYLKPEINRDEWTEEENVKLNNLAKKYKFQDWIAIAAEMKGRSDYQCFVQYQTVVALKMREDKGERWTREEDELLLTLVEKHRMGNVIRWNPICSQLPNRTKKQCFARYKYSINPNILRAPFTPEEDCIILAAVEEYGENFNCFPKALFPNRTVVQIRNRYYNSIKVRDTIRNWTPGDDKILLNLVAKHGNHDWKKISGEIKRHSRTSCRTRFYVISKFLKENPNATVNDLPRKNRGPLSTVTKRNWMKKIAEIKKNPSENVGEKGVCKKECYRVRLRKNELDWYNYLKFSYDFTFGKCFSRVPESIKGLEFVRSVFDMQLQLPITLDKPYTNGVVRVSFEKLIRTLAQNNNFMVNDTPHVWYRLPPNYCTLLAFRGLCIQTSFNQDKSAAIVVKEQDVVVEAKKKFRQRLVSLLYKTTLLSRLEPRSVVERNHFQVLFDPNTRLGQIASKSLAELKTAQMNKIAENLKIATQKAKRKLKTQSNNSSTPPPACKKLKSELK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -