Pxyl013755.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- nfxl1
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000356.1:8402022-8404490[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 21 0.81 2.4e+04 -3.8 1.1 9 12 161 164 160 164 0.70 3 21 0.063 1.8e+03 -0.3 0.4 4 10 169 175 168 175 0.95 4 21 1.5e-07 0.0045 17.7 15.9 3 19 186 202 185 202 0.95 5 21 1 2.9e+04 -5.1 1.1 15 18 227 231 227 232 0.45 6 21 3.3e-08 0.00095 19.8 13.9 3 19 239 255 237 255 0.91 7 21 5.9e-08 0.0017 19.0 10.2 1 19 290 308 290 308 0.98 8 21 1 2.9e+04 -4.2 1.4 5 10 332 337 332 337 0.91 9 21 5.6e-08 0.0016 19.1 16.9 1 18 344 360 344 361 0.97 10 21 0.66 1.9e+04 -3.5 2.8 7 13 365 371 365 373 0.70 11 21 3.4e-07 0.0098 16.6 16.7 1 18 395 412 395 413 0.97 12 21 3e-10 8.8e-06 26.3 14.2 1 19 422 440 422 440 0.99 13 21 0.0011 32 5.3 10.2 1 19 479 498 479 498 0.73 14 21 0.011 3.1e+02 2.2 7.3 3 12 508 517 507 517 0.92 15 21 0.15 4.5e+03 -1.5 3.5 14 18 546 550 546 551 0.87 16 21 0.66 1.9e+04 -3.5 0.3 8 11 567 570 567 571 0.77 17 21 0.027 7.8e+02 0.9 5.2 3 11 589 597 580 598 0.81 18 21 0.52 1.5e+04 -3.2 1.3 15 18 612 615 611 616 0.83 19 21 6e-05 1.8 9.4 14.2 4 18 629 644 627 645 0.86 20 21 1 2.9e+04 -6.5 3.4 9 13 651 655 651 655 0.71 21 21 8.5e-06 0.25 12.1 13.6 1 18 686 704 686 705 0.91
Sequence Information
- Coding Sequence
- ATGTCGCGTAAATACCGGGACGCGGCTGCGAAGCTGCAGCAGAACGTTCAGAAACATCTTCAGGGAATGAAAGAGGTTTCTTCCTCCGACGATGAAGACCCATACGAGTCGAGCGTGCTGGAGGGAGTGCTGCAGAGCTACCAGAGCCGCGGCGGGGACGCGCACATGCTGCAGCGCACCAAGAATCTTCTGGAAGAGTCTCTGAGCGGCCGCGCCGTCACCTGTCTCATCTGCATAGGTTCCATCAAGCGCCTCGATGCCATATGGACCTGCGGACACTGCTACTCCTATTTCCACCTCTCCTGCATTCAAAAGTGGTCCAATGACAGCATCAGCCTCCGCAGTGAAGAAAACCACGGCCCTATTGCTGTGGTCAAGCCCAAGAAGATAGAATGGTGCTGCCCCAAGTGCCGGAACTCATACTCCAAAGACGAGATACCGCGCAATTACTACTGCTTCTGTGGGAAGGCGAGGGACCCTCCGTGCCACCCGTGGCTGATACCGCACTCTTGTGGGGAGATCTGTCAGAAGCGGCTGTCTGATGGCGACAATTGCAAACATAAATGTCTCCTCCTCTGCCATCCCGGTCCATGCCCCCCGTGCCCACAAATGGTAAATGGAGTCTGCTATTGTGAGAAGGAACACAAGAAGGTGCGTTGCAGCTCCTCCAAATGGTCATGCGGGAGCCCCTGCAAGAGGCTCCTGTCCTGCAAGTCACACAAGTGTGAGAACACATGTCACGTGGGTAACTGTCCACCGTGTACCTACACAAGTGTACAATCTTGCCAGTGTGGGGCAGAAAAGGTGAAACGCCCCTGCAATGATCCAAAATGGAGGTGCCTTAAGCCTTGCAACAAACCTTTCTCATGCGGCTACCACAAGTGTGAAGAAATATGCCACTCATCAGACTGTGGCCTCTGTCCAAACTCTGGAATGAGATCCTGCCCCTGTGGTGCAAACCAACGCTATGTAGAGTGTCCTGATGTGATGGAAACCTGTCTAGAAACATGTGGAAAGATACATGAAGATTGTGGCCATAGTTGTCCTGAAAAATGCCACAAGGGCTCATGTCCACCATGTCTTGTGCTAGTGGAGAAGAAATGCCACTGTGGCACCCACGTGAAGTCACTGCCCTGTAGCAAAGATTTCCGATGTGACACAAAATGCAGAGGAAGCAGAGACTGTGGCAAACATGCTTGTGCTAAGAAATGCTGCAATGGCAACTGTCCACCATGTGAGAAAGTGTGTGACAAGCCGCTTCAGTGTGGACGGCACAAGTGCTCCACGGTCTGCCACCGCGGACCCTGTTACCCTTGCCCAAGAGAATCCAAAGTGACCTGCCGCTGTAAGGAGACATCCATCACTGTCCCGTGCGGCAGAGAGAGACACACCAAACCCCCAAGATGTAGCCTCCCTTGCAAGATCAAGTACAAGTGTGGCCACACCACAGAAAATGTTCACCAATGCCACTTTGGAGACTGCCCACCCTGTAAGGCCATTTGTGACAAGTTGTATGACTGCAACCACAAGTGTGTAGCCACATGTCATGAATATGTTGCAGTCACATTCAAGCAGATTGAGAAACCAGCAACACCCTGGGAAGTTCAGCAGCCTAAAACGAAAATAATGACATTAGACTGCCCTCCATGTGAGACAAATGTTCCCATGTCTTGCTTTGGTGGACATGAAACAGTATTCCAAAAATGCCATGTAGCCGCTCGCTACCCTTGCGGCAGGGAATGTGGCAGAGAACTGCCATGTAAAAAACACATGTGTTCATTACCATGTCACCTCTTTGTGCATGAAAAATCGTATCCAAATGTGCCTTTTACCTGTGAGCCATGCGACCGAGAGTGTTTGGTTCCCCGTCCAGAGAAATGTGTTCACAAATGCCCCAGGTCCTCGTGTCACCCCGGAGATTGCCCCCCATGTGTTGTAGCAAAGAGGTTGCCCTGTCACTGTGGGCTTAATGAACTATACATGAAGTGCAATGAGTTTATTGTGGCTAGTGAAGAGCAGTTGTCGTGCAAGCAGCAGTGCCCGCGCAACATGGCGTGCGGCCATCGCTGCAGGAACTCCTGCCACCCCGGCGCGTGTCAGGGCCAAGTCTGTACCAAGAAGACGAAGGCTTACTGCTCATGCGGGAACTTGAGGAAGGAACTCCCGTGCAATGTGGCTCGGGACGGGAAGAAAGTAGACTGCGACGAATCCTGCAAAGCTAAGCAGTTAGCTGCGATGTTGGAGAAAGAGAACGAGGAAAAGAGGAGAAAGGAACAGGAAGAAGAGAAGAATAGGAGGGAGTTGGCGGAGTACGAGTGGAAGCTGAGCGGGAAGAAACGGAAGCACAAGGAGAGGAGGGTTGTTGAGAATGCGGACGATCGCAGTCTGCTGCAGAAGTTCTGGATCCCAGTGACAGCTGTTACGGTACTGGTGTCGGCGGCTCTTTACTACGTCATATTAGTAGAATAG
- Protein Sequence
- MSRKYRDAAAKLQQNVQKHLQGMKEVSSSDDEDPYESSVLEGVLQSYQSRGGDAHMLQRTKNLLEESLSGRAVTCLICIGSIKRLDAIWTCGHCYSYFHLSCIQKWSNDSISLRSEENHGPIAVVKPKKIEWCCPKCRNSYSKDEIPRNYYCFCGKARDPPCHPWLIPHSCGEICQKRLSDGDNCKHKCLLLCHPGPCPPCPQMVNGVCYCEKEHKKVRCSSSKWSCGSPCKRLLSCKSHKCENTCHVGNCPPCTYTSVQSCQCGAEKVKRPCNDPKWRCLKPCNKPFSCGYHKCEEICHSSDCGLCPNSGMRSCPCGANQRYVECPDVMETCLETCGKIHEDCGHSCPEKCHKGSCPPCLVLVEKKCHCGTHVKSLPCSKDFRCDTKCRGSRDCGKHACAKKCCNGNCPPCEKVCDKPLQCGRHKCSTVCHRGPCYPCPRESKVTCRCKETSITVPCGRERHTKPPRCSLPCKIKYKCGHTTENVHQCHFGDCPPCKAICDKLYDCNHKCVATCHEYVAVTFKQIEKPATPWEVQQPKTKIMTLDCPPCETNVPMSCFGGHETVFQKCHVAARYPCGRECGRELPCKKHMCSLPCHLFVHEKSYPNVPFTCEPCDRECLVPRPEKCVHKCPRSSCHPGDCPPCVVAKRLPCHCGLNELYMKCNEFIVASEEQLSCKQQCPRNMACGHRCRNSCHPGACQGQVCTKKTKAYCSCGNLRKELPCNVARDGKKVDCDESCKAKQLAAMLEKENEEKRRKEQEEEKNRRELAEYEWKLSGKKRKHKERRVVENADDRSLLQKFWIPVTAVTVLVSAALYYVILVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -