Pxyl025396.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- ZFX
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000522.1:3714817-3726574[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.85 65 5.0 1.4 1 23 261 284 261 284 0.97 2 13 0.00015 0.011 16.8 2.5 1 23 291 313 291 313 0.95 3 13 0.64 48 5.4 1.8 1 23 317 340 317 340 0.96 4 13 0.00084 0.064 14.4 1.6 1 23 346 369 346 369 0.96 5 13 0.46 35 5.8 4.6 2 23 374 395 374 395 0.97 6 13 0.00021 0.016 16.3 0.5 2 23 402 423 401 423 0.97 7 13 0.17 13 7.1 2.5 3 23 435 455 434 455 0.96 8 13 0.0002 0.015 16.4 3.7 1 23 466 489 466 489 0.97 9 13 6.6 5e+02 2.1 0.3 1 9 532 540 532 546 0.83 10 13 6.6 5e+02 2.1 0.3 1 9 601 609 601 615 0.83 11 13 0.0011 0.08 14.1 6.7 1 23 676 699 676 699 0.93 12 13 3.9e-06 0.0003 21.7 0.3 3 23 710 730 709 730 0.99 13 13 0.00025 0.019 16.1 0.2 1 23 736 759 736 759 0.96
Sequence Information
- Coding Sequence
- ATGGAACTGCCGATAATGAGCGAGGCTTTCAACATTTGCTGTACGTGTCTTAGCAGGGATCGTCTTCTTACTCCTGTGGACGGTTTAATGCTGTATGCCCAGTTGCTTAACATACAGTTGCAGACAAGCGGAGGTGTCTGCTGGGAGTGCCGTGCGCTGCTGCTGCGTCTCAATGCATTCACGGAGCAAGCTAGACGTGCACAGGACCTGCTGCGGGTGTACGCTGTGTACACTGACCATCAGAAGAGTCTAGACCTAGACAGCCTGTCACGACTGAGCTGTTCAAGCAAAAACGAGTATGATTGCGTCATCTACACCGATGGAGTCATCAAAGGCGAAGACTCAGTGAAGATCGAAGAGCTAAAGTCAGACATCACTTTGTTAGAACTAAATCCAGTCCCTTTCTTTGATTCCCGATCTCAATCACCTCTTAGTCAATGTGACGTCACACCGGCAAACCCAGACGCATCACAAGAACCAGAAACCATAAAGTACGAAACAGAAGACGATATCTCCTTATCAATGTTAAAAAAGAAGAAATCAAAACAGCCAGTAAAGACGAAAAAGGTTGCAGCGAAAAAAAGTAAAAAGGTCACAAGGAAAAAAACAAAAGCCAAACCAGACACAGATGATGATGAGCAATCTAATGATGGTCAGGAACAGAAAAGTGAACAGAATGCTAGCAGTAGTTTCAAGTATATAGTAAGGCAAATGTCTGAGGAAGAGTTCCAGGCCGCCAGGACCGCTAAAGCGAATACGAGCCATTTTAAGAAGGCTGAGTTTAAGTGTGAGTCTTGTATAACCGCCTTCTTTGATAAGAAGAGGTTTGACGCGCACATGGAGACAAAACATGCCAAGTCGCTCGGCCCACACGAGTGCAACATCTGCGGCACTAGGTTCAAGAAGGCGTTCTCCCTCTCCCGCCACACGAGTGAGCACTACCGCGGCTACCGCTGCCGGCTGTGCGACTACGCGCACTACAACCAGAGCTCCGTGGAGTCGCACTACCTGAAGGCACACGACACTGATACGACGTTCGATTGTAACACGTGCGGAGCTAAATTTGAAACAAAGCGCATGCTGCGCTACCACCGCGACACGACGCACAAGGAGGCGCCGCGCTGCGAGCTGTGTCGCCGCCAGTTCAAGACCACCACCATCCTCAAGCACCACTACCTAACGCACGCGCCGCAGCCCGAGCTGGAGTGCGAGGTGTGCCACAAGCGATATAAGGGTGCCCGCAACCTGGCCGTCCACGCACGCTCGCACCGCGCCCCGCGCGCGCCGCCCGAGCTCGCCTTCTGCGCCGAGTGCGACCGCCAGTTCAAGTCCGCGCTCTGCTACCGCTACCACGTCAAGTACCATCCGAGACATCGGAGTGATGACGTGCTGAAGTTCAAGTGCGAGCACTGCGACAAGCGCTTCATCAGCCGCACGTTCCTCAACTACCACGTGACCACCATCCACCTGCGCACCTACCCGCACCAGTGCCACCTGTGCAGCAAGTGCCACCTGTGCAGCAAGGTACGTGGACATCTCACACACGGGGGACATCTCACACACGTGACCACCATCCACCTGCGCACCTACCCGCACCAGTGCCACCTGTGCAGCAAGGTACGTGGACATCTCACACACGGGGGACATCTCACACACGTGACCACCATCCACCTGCGCACCTACCCGCACCAGTGCCACCTGTGCAGCAAGCAAGGTACGTGGACATCTCACACACGGGGACATCTCACACACGGGGGACATCTCACACACGTGACCACCATCCACCTGCGCACCTACCCGCACCAGTGCCACCTGTGCAGCAAGGTACGTGGACACCTCACACACGGGGACATCTCACACACGAGGGAACATCTCACACACGTGACCACCATCCACCTGCGCATCTACCCGCACCAGTGCCACCTGTGCAGCAAGCAAGGTACGTGGATATCTCACACACGGGGACATCTCACACACAGGGGACATCTCACACACGTGACCACCATCCACCTGCGCACCTACCCGCACCAGTGCCACCTGTGCAGCAAGAGTTTCTCGCGCTCGTTCAAGCTGAAGGAGCACGTGCAGTTCACGCACGAGGGCAAGGTCAAGGTCAAGGACAAGCTGTGCCCCTACTGCGGGAAGGCCTTCAACAACAAGAAGGTGTTGAACAACCACGTGCGCGTGCACACCGGCGAGAAGCCGTTCCAGTGCGGCCTGTGCGCCGCGAGCTTCGCGCAGCAGAGCACGCTCACCACGCACGTGCGCGGGTTCCACATGAAGCTCAAGAAGAGATAG
- Protein Sequence
- MELPIMSEAFNICCTCLSRDRLLTPVDGLMLYAQLLNIQLQTSGGVCWECRALLLRLNAFTEQARRAQDLLRVYAVYTDHQKSLDLDSLSRLSCSSKNEYDCVIYTDGVIKGEDSVKIEELKSDITLLELNPVPFFDSRSQSPLSQCDVTPANPDASQEPETIKYETEDDISLSMLKKKKSKQPVKTKKVAAKKSKKVTRKKTKAKPDTDDDEQSNDGQEQKSEQNASSSFKYIVRQMSEEEFQAARTAKANTSHFKKAEFKCESCITAFFDKKRFDAHMETKHAKSLGPHECNICGTRFKKAFSLSRHTSEHYRGYRCRLCDYAHYNQSSVESHYLKAHDTDTTFDCNTCGAKFETKRMLRYHRDTTHKEAPRCELCRRQFKTTTILKHHYLTHAPQPELECEVCHKRYKGARNLAVHARSHRAPRAPPELAFCAECDRQFKSALCYRYHVKYHPRHRSDDVLKFKCEHCDKRFISRTFLNYHVTTIHLRTYPHQCHLCSKCHLCSKVRGHLTHGGHLTHVTTIHLRTYPHQCHLCSKVRGHLTHGGHLTHVTTIHLRTYPHQCHLCSKQGTWTSHTRGHLTHGGHLTHVTTIHLRTYPHQCHLCSKVRGHLTHGDISHTREHLTHVTTIHLRIYPHQCHLCSKQGTWISHTRGHLTHRGHLTHVTTIHLRTYPHQCHLCSKSFSRSFKLKEHVQFTHEGKVKVKDKLCPYCGKAFNNKKVLNNHVRVHTGEKPFQCGLCAASFAQQSTLTTHVRGFHMKLKKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -