Pxyl023182.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- Zfx
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000565.1:2579355-2593895[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.35 26 6.2 0.1 1 23 349 372 349 372 0.92 2 20 0.0031 0.24 12.6 1.4 1 23 379 401 379 401 0.96 3 20 3.7 2.8e+02 2.9 0.6 1 23 405 428 405 428 0.88 4 20 2.3 1.7e+02 3.6 0.0 2 21 638 657 638 660 0.87 5 20 0.0017 0.13 13.5 1.5 1 23 667 689 667 689 0.97 6 20 3.7 2.8e+02 2.9 0.6 1 23 693 716 693 716 0.88 7 20 2.2 1.7e+02 3.7 0.0 1 21 925 945 925 948 0.89 8 20 0.0017 0.13 13.5 1.5 1 23 955 977 955 977 0.97 9 20 3.7 2.8e+02 2.9 0.6 1 23 981 1004 981 1004 0.88 10 20 2.2 1.6e+02 3.7 0.2 2 20 1008 1026 1007 1028 0.92 11 20 0.025 1.9 9.8 3.1 1 23 1032 1054 1032 1054 0.98 12 20 0.59 45 5.4 1.0 2 22 1062 1081 1061 1085 0.88 13 20 0.024 1.8 9.8 1.1 1 23 1093 1116 1093 1116 0.91 14 20 0.031 2.4 9.5 4.8 1 23 1122 1145 1122 1145 0.96 15 20 0.0013 0.098 13.8 0.4 2 23 1160 1181 1159 1181 0.96 16 20 0.35 27 6.2 0.0 2 20 1188 1206 1187 1210 0.77 17 20 0.025 1.9 9.8 5.2 1 19 1226 1244 1226 1249 0.90 18 20 1.2e-05 0.00091 20.2 3.8 1 23 1256 1278 1256 1278 0.98 19 20 0.026 2 9.7 0.0 3 23 1283 1303 1281 1303 0.93 20 20 0.49 37 5.7 1.9 1 23 1312 1335 1312 1335 0.96
Sequence Information
- Coding Sequence
- ATGATACAAGCTTGTGTTTTTTGCCTGTCACAAGACAGGGATCTGTTGAAGATTGATGAATCGCTGTATTTCTCTGTTTATCCAAGTTTTAAAGAAAAAAACTACGAATACATAAATTACTTAAAGGCAGAAAATTTACTAAAACTATGCTGGGAATGTCAAGGCAGGGTTACCAATTTCAAAAAGTTCTTGGATACAGCAGAAAGAAGTCTAAATACTTTGAAAATGGTCATGGTTCTTCCTTCAGGGGATCTTCCAAAGTCAGAGTCAAGGCTGCACATAACTACCGCATATTGCATAAACATAGAAGGTGCTGTAACTCTGCTGTTGCCCCCTAAAGTAGAAAAGATCATTGATGATGCAGACCACTCCGCTGTTGAACCAGTACAACAAGAGCAAAAAGACAATGATGTAAGTGTGACAGCTGTCAAACTGGAATTGAACCTAGATGAATTGGATGATAATGACATTGGCAATGATGATGGTGACGGCAGAGACAGTGATACCCAAGCTTCTGTTCCAGGAGGTTCGTTTAGCATCAATAATCTAAGCAAGGATGATAATATCAATAAGGACAATGACACTACATCCAACAAGCATATTGAAGATGATCACAGTCTGCCGGCTGTGTGGGTCGCACCGCTGCCCCTTATTATACCAGGCATAGAATGTAATATTAAAATAACTACAAGCAGCTTACTAGGCCTAGAAGGCATTAAAAAAATTAAGCCAAGCAACAATGATGTAAGCTTGAGTGCAGCCAAACCGGAGGATAGTGACATCAACAATGATACAACATCCAACAATCATACTGAAGATGACCCTAGACCTCCGGCTGCATCGACGTCATCACTGCCCCCTGATGCAACAAAGACTCCTAGTATAAAAATAGTGGAAACAGGCAAGAGTGCAAAAACAAAAAAGCCGCGGCCGAAGCCGCTCAAGTCGCTCAAGTTCAATGTGGTGTGGGCGTCCAGCGAGCAGGCTATGCGCTGGCACCGCGAGGAGCTGCGGCGCGCGCGAGAGGCGAGCCTCAGCTTCGTGCACGAGTGCGACGCGTGCGAGAGACTGTTCGCCGAGGAGGAGGAGCTGAATAGACATGTGGGGAAGGCACATTCTGAGGAGGCAGGAAAGTATACATGTGATGTTTGTCTTTATCGATTTCCGGATCACACCAAGTTGAAACAGCACATGGTGGCTCACTACATCAACTACAAGTGTAAAACCTGCAGCTTTGAAAGCAGAATACTGGCGGAAATGCAAAAGCATGTCAGTGATACTCACCCGAATACTAAGTGCCTTAAGTGTAGGAATGAATTTGCATCGAAAGCAGAAGAAGAGTTTAGCATCAATAATCTAAGCAAGGATGATAATATCAATAAGGATAATGACACTACATCCAACAAGCATATTGAAGATGATCACAGTCTGCCGGCTGTGTGGGTCGCACCGCTGCCCCTTATTATACCAATATCACAGTGTAAAAAAGTATCAAACCAGACCAGCTTACCAGGCAAAGAAAGTAATAAAAAAATAATATCGAACCAGAGCAGCTTAACGTGCAAAGACAGCATTAAAAAAATTAAGCTAAGCGACAATGATAATGATGTAAGCGTGAGTGCAGCCAAACTTGAGGATAGTGACATCAACAATGACACCACATCCAACAATCATACTGAAGATGACCCTAGACCTCCGGCTACGTCGACGTCATCACTGCCCCCTGATTCAACAAAGACACCTTGTATAAAAATAGTGAACTCAGGCAAGAGTGCAAAAACAAAAAAGCCGCGGCCGAAGCCGCTCAAGTCGCTCAAGTTCAATGTGGTGTGGGCGTCCAGCGAGCAGGCTATGCGCTGGCACCGCGAGGAGCTGCGGCGCGCGCGAGAGGCGAGCCTCAGCTTCGTGCGCGAGTGCGACGCGTGCGAGAGACTGTTCGCCGAGGAGGAGGAGCTTAATAGACATGTGGGGGAGGCACATTCTGAGGAGGCAGGAAAGTATACATGTGATGTTTGTCTTTATCGATTTCCGGATCACACCAAGTTGAAACAGCACATGGAGGCTCACTACATCAACTACAAGTGTAAAACCTGCAGCTTTGAAAGCAGAATACTGGCGGAAATGCAAAAGCATGTCAGTGATACTCACCCGAATACTAAGTGCCTTAAGTGTAGGAATGAATTTGCATCGAAGGCAGAAGAAGAGTTTAGCATCAATAATCTAAGCAAGGATGATAATATCAATAAGGATAATGACACTACATCCAACAAGCATATTGAAGATGATCACAGTCTGCCGGCTGTGTGGGTCGCACCGCTGCCCCTTATTATACCAATATCACAGTGTAAAAAAGTATCAAACCAGACCAGCTTACCAGGCAAAGAAAGTAATAAAAAAATAATATCAAACCAGAGCAGCTTAACGTGCAAAGACAGCATTAAAAAAATTAAGCTAAGCGACAATGATAATGATGTAAGCGTGAGTGCAGCCAAACTTGAGGATAGTGACATAAACAATGAAACCACATCCAACAATCATACTGAAGATGACCCTAGACCTCCGGCTGCGTCGACGTCATCACTGCCCCCTGATTCAACAAAGACTCCTTGTATAAAAATAGAGGACTCAGGCAAGAGTGCAAAAAAAATAATACCGCGGCCGAAGCCGCTCAAGTCGCTCAAGTTCGATGTGGTGTGGGTGACCACGGAGCAGGCTATGCGCTGGCACCGCGAGGAGCTGCGGCGCGCGCGAGAGGCGAGCCTCAGCTTCGTGCACGAGTGCGACGCGTGCGAGAGACTGTTCGCCGAGGAGGAAGAGCTGAATACACATGTGGGGGAGGCGCATTCTGAGGTGGCAGGAAAGTATACATGTGATGTTTGTCTTTATCGATTTCCGGATCACACCAAGTTGAAACAGCACATGGAGGCTCACTACATCAACTACAAGTGTAAAACCTGCAGCTTCGAAAGCAGAATACTGGCGGAAATGCAAAAGCATGTCAGTGATACTCACCCGAATACTAAGTGCCTGAAGTGTAGGAATGAATTTGCATCGAAGGCAGAACTAGACCTCCATTATAGCTTATGCGAAACATACAAATGCTCGTATTGTAAAGCAAAGTTCTCATTCCGGGATGTTTACATGGAACACACACAGAAGCACTTGGCAGACCCTGACGGCATCTACTGTGAGGTGTGCGATGTGTTCTGCTCTCCCTCGTGGTACAGGCAGCATCTGCGAACCACCTTGAAACACGTGTCCAGGGATTCTTTCAAACACGAGTGTGAAATTTGCCACAATAAATATCCGACCGCGCGTAAACTGGCGCAGCACATGGTCGGCACTCACAAGCGCCCGGGCCCCCATCCTTGCGATCTGTGCCAGAAGTCTTTTTTCAAGAAATGTTATTTGTTAAGCCACCGCGCGACGGTCCACAAGACAGGGCCTGGCAAAGTAAGGAAATATGTGAAGGATAAGATGTGTGAAACATGCGGTAAAGGATTTCAGACGGAGGCGGCGCTAAGTAGCCACCGTAACAGTCACACGGGCGAGCGGCCGTGGCGCTGCCCCGACTGCCCCGCCGCCTTCACGTCGTCAGCGATACTGGGGCTGCACCGCGTGAAGATCCACGACAAGGCCGTCAACAGAGTCGGCCAGGAGGAGAGGCCTAACAAGTTCTGTTGCGACGTGTGCGGGAAACAGTTCCACTTTCCGTCGGAGCTCAAGAACCACAACGACTTCTTCCATCTGAAGAAGGCAACCAAATATCATTGCACAATTTGTGATAAGTACTTCCGGCGGGCGAGCACGCTGCGCGTCCACAATCGCACTCACATGCGCCTCCCCTGCGAGCCTTGCGGGAAGTGGTTCAAGGACCCAGAGGCGCTCGACAAACACTTGAAGAAGCACTCCCTGCTCTCGTGGAAAGGGCCGTATAAATGTCGCTCTTGTGACGTCACGTACAGCGCTCGCAACAACATGTACGAACACTACAAGCTCAAGCATCTCCATCTGAAAAAAGACGACCGCGTCACGATCAAGAATCTCTACAAACTAGACAAGGAAGTTGAAGTTATATGGATGGATAAAAAGTAA
- Protein Sequence
- MIQACVFCLSQDRDLLKIDESLYFSVYPSFKEKNYEYINYLKAENLLKLCWECQGRVTNFKKFLDTAERSLNTLKMVMVLPSGDLPKSESRLHITTAYCINIEGAVTLLLPPKVEKIIDDADHSAVEPVQQEQKDNDVSVTAVKLELNLDELDDNDIGNDDGDGRDSDTQASVPGGSFSINNLSKDDNINKDNDTTSNKHIEDDHSLPAVWVAPLPLIIPGIECNIKITTSSLLGLEGIKKIKPSNNDVSLSAAKPEDSDINNDTTSNNHTEDDPRPPAASTSSLPPDATKTPSIKIVETGKSAKTKKPRPKPLKSLKFNVVWASSEQAMRWHREELRRAREASLSFVHECDACERLFAEEEELNRHVGKAHSEEAGKYTCDVCLYRFPDHTKLKQHMVAHYINYKCKTCSFESRILAEMQKHVSDTHPNTKCLKCRNEFASKAEEEFSINNLSKDDNINKDNDTTSNKHIEDDHSLPAVWVAPLPLIIPISQCKKVSNQTSLPGKESNKKIISNQSSLTCKDSIKKIKLSDNDNDVSVSAAKLEDSDINNDTTSNNHTEDDPRPPATSTSSLPPDSTKTPCIKIVNSGKSAKTKKPRPKPLKSLKFNVVWASSEQAMRWHREELRRAREASLSFVRECDACERLFAEEEELNRHVGEAHSEEAGKYTCDVCLYRFPDHTKLKQHMEAHYINYKCKTCSFESRILAEMQKHVSDTHPNTKCLKCRNEFASKAEEEFSINNLSKDDNINKDNDTTSNKHIEDDHSLPAVWVAPLPLIIPISQCKKVSNQTSLPGKESNKKIISNQSSLTCKDSIKKIKLSDNDNDVSVSAAKLEDSDINNETTSNNHTEDDPRPPAASTSSLPPDSTKTPCIKIEDSGKSAKKIIPRPKPLKSLKFDVVWVTTEQAMRWHREELRRAREASLSFVHECDACERLFAEEEELNTHVGEAHSEVAGKYTCDVCLYRFPDHTKLKQHMEAHYINYKCKTCSFESRILAEMQKHVSDTHPNTKCLKCRNEFASKAELDLHYSLCETYKCSYCKAKFSFRDVYMEHTQKHLADPDGIYCEVCDVFCSPSWYRQHLRTTLKHVSRDSFKHECEICHNKYPTARKLAQHMVGTHKRPGPHPCDLCQKSFFKKCYLLSHRATVHKTGPGKVRKYVKDKMCETCGKGFQTEAALSSHRNSHTGERPWRCPDCPAAFTSSAILGLHRVKIHDKAVNRVGQEERPNKFCCDVCGKQFHFPSELKNHNDFFHLKKATKYHCTICDKYFRRASTLRVHNRTHMRLPCEPCGKWFKDPEALDKHLKKHSLLSWKGPYKCRSCDVTYSARNNMYEHYKLKHLHLKKDDRVTIKNLYKLDKEVEVIWMDKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -