Pxyl017877.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- ZFX
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000567.1:7114349-7124217[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.4 2.6e+02 3.0 0.3 2 23 6 27 5 27 0.95 2 13 4.6 3.5e+02 2.7 0.3 1 23 945 968 945 968 0.90 3 13 1.8e-05 0.0013 19.7 1.7 2 23 1067 1088 1066 1088 0.97 4 13 0.019 1.4 10.2 2.6 1 23 1094 1116 1094 1116 0.98 5 13 0.0042 0.32 12.2 5.8 2 23 1123 1144 1122 1145 0.94 6 13 0.93 71 4.8 2.4 5 23 1158 1176 1156 1176 0.97 7 13 0.01 0.76 11.0 2.4 3 23 1183 1204 1182 1204 0.97 8 13 0.00022 0.017 16.2 0.3 2 23 1220 1240 1219 1240 0.97 9 13 0.00017 0.013 16.6 1.6 1 20 1246 1265 1246 1268 0.92 10 13 0.00037 0.028 15.5 0.4 1 23 1276 1298 1276 1298 0.98 11 13 0.014 1.1 10.5 7.3 1 23 1304 1326 1304 1326 0.98 12 13 4.8e-06 0.00036 21.5 1.4 1 23 1332 1356 1332 1356 0.98 13 13 0.0011 0.082 14.1 5.1 1 23 1362 1384 1362 1385 0.95
Sequence Information
- Coding Sequence
- ATGGATCAGGTAGTTCAATGCCCCGTGTGCACCCTCTATCTGCACAATGGGATGTCGCTGGAGTCCCACTTGGACACACATCCCAAGGATCAAGTGATAAAGGCACTATGTTCACTCTCCTCAAACAGAAGTAGCTATGGGAGTAGAGCATCCACCCCCGTGCACTCGGAGCGCTCCTACAGAAGTAGATCACGGACCCCGGCCACGGAGGAGGCGGCCCGCTGGAACACACCACACAGCACTGATCATGAGCGCTTCTGGAGAAGAACACCGAGCCGGACCCCCAAGACATCTACAGTGACTCGAGTGGAAACACCTGACCTTAGAATAGGAGACAGTAATTTTGACAGTAGTGGCTCAATAAATACTTCAAACTCTGTGTTCTCTAACCCATCCAAAAGTGAAAAACCACCTCAGCCTTATCCCTCTGTGCCTGTTAGTGATTATGAACAACCATATTCCTATTTTCCGGAGCAAAAAGAAAAGAAAGAAATAAAGTACTCACGCAGTGCAGAGTATAATTCTCAAAACAACACTAACAGCGTGTATGCATACAACATGACCACTCCATGTGTGCGGCTGAATGCGCTGCTACCAGCACAGAAAAGAAATGAGCCAGTTAACATGTTACCAACCAACAAAAACCAAGATTTTATTAAGCTCCTACCTAAATCTCGCAATATAGCTCTTGTGAAAGCAAATGTTGGGACCATGCAATACATAGCTCCTGGAGTCATGGTGTCTTCGGGACCTACTTTTGTACAGAAGAATAATCCAAATAACCTCATTGTGACTTCTAACCTTCAGAACCCGATGGTACAAAGTAAGTCTATCACAACACCATTGTCTTCTCACCAGTACAACCAGATGGCTCCGAGCCCTTTTGCACCAAACACCACAGTGGTGACGCAGAACTCTCAGATCATATACAGTGAGATGGTCCATAGTATTGATGCTAAGCGCTTCATCCCGGGCGGGCCCGCGGCGATGGCTCAGGAGAACATCACCAACGTGTCTCAGACCAGCTCCATGTACCAGAATGTGATGGTTGTGGACCAGTTTGGGAACACTTCATGTATGTACTCAACACCACAGCAACTCTTGCCAAAACCAAGTACCTCATACAACCAAAGTGTTCCAACACTGGACAAAAATGTTGATTCCAACAAAACTCTGATAATAGAAGTTTCACCCATTGTGGCTCCTCCGCCCGTGGAGGTGTGTGACGCCTCCACCAGCATGGCCCCACGCAAGGAGACCACAGATGAATACCCTCCGGAGAAACCTGAACCCTCAGGGTCAACTAAAGGGTTGAAAATTCTGAGCAATATAAAAGTTGAAGTTCCAGTGCAGCATCACAAGAACCTGCTCAACACGGTGGTGGACCTCACGGGACCAACTGAATGTGTCTATCCCAATAGAACAAAATCACCTGAAAGAATATTGCCTGACATTGAGGTCACGATTACTCAGAACAATGTTGAAACTCAACCTTCAGCTTTGAATAGTAATGAGTGCATAGTTACTAATACATTCTCTGTGATAAAGAATGTTGGAAATCCACCAACATACAAGGAGGCCAAGATGGATCATAAAATTCATGAAACTGAGTCTTCAGACAGTTGTCCAGTACCTGACCTCATCTGCAATGAGAAGCCTTCCATATCCCCATGTAGCGAGCTGTCGGACAACGGGGACAATGCCACGGCCATGGCCTCAATCTCTCTAAAACCAGAGCCGAGCTCATCTGTAGATATAAAGAAAGAGGCAGGCATTCCTGTCCGATCCTTCAGGAGCAATCCCTTAAGACTGAACAACATCTATGTGAAGAAACACAAAAAGGTCCTGCAAATAAAAAATGCCAAGTCATTCCCCGTAGCGAGCACCTCAACAAGCATCGAAGTGGTCAACCTGAGTTCATCACAATCATCACGGTTACCGGAAGACTTTAAGATGACCAAAATAGTGAATCATTCAGACAAACTGGACAACGACGACTCACGGGGGAGTAGACTAGAGACCGTGTCTATAAACAAGTTGAACGAGCACGAGCACGAGTTCGACGCCGACACGGAGGAGCAGTCCATGGACATGGAGCTGGAGCCGGTGGGCGGGTACCCCCCCTCCCCCGCGCGTTACCCCTCGGCCCCCGCCTCGCCCTCCACCATCGACCTCACTCAGGTCAAGGAGGAAGTCAACAGCAACGACTTTAGCAACCAGACGGGCGAGTCGGAGCGCGAGTTCACGCCGCTGCAGGCGCTGCGGGCGCCGCGCGCGCGCTACGAGAATCGGGACCTGCTCGACCTCGAAGCTGCTAAAAGCAAGCAGTTCGTCAGCATGATGAACGACAACTACTTCGGGGACAACATCTACGCGGACTACTTCACGCCGGATCGCGTTGAATCCTTCGACGCGCACGGTTCATCAGCTAGTTTCGGGAAGGAGGTTCCCAAAGACGGGGTGTACCTGTGGGGCGAGCCGTCTCAGAAGGAAAGCGAGTTTGTTTTACCCAACTTCATGCCGGACGGGTACAAGTTACCTGACGGGGCGGAGTTCGCGCTGGGCCGCGGGGAGTGCAAGGCGGGCGTGCTCGAGCGAGCGGAGCCCGCGCTGGACATCTGTGCTGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGACAGGAGAGCAACGGCGACATGGACGCGCCCTGGAATGGGATGTACCAAGAGGTGACGCCAGCGGAGCCCTACGACCTGATAGCCAGAGAGAGCTGGATCTCCGACGGCTCAGAGATTGACAGCAATGAGAAACGGGACAGCTTAGAGGAAGAGCAGCCCAAGCCGCGTCTCTTCAACTGCTTAGCCTGCGGTCTCCACTTACCATCCATGAAGGAACTCCGAACTCACCGGGCCGAGGCACACCCGCCGCCGGGCGGCTCCGCGGATAATACAACGTACTCACGACTCATGATCAAGAAGGTTATTAAGAAGGAGGATAAGACTGATGAGCAGGTTTTAGCAGGAATGCTGCAAGACTCAAAAGCGGGCATCACAGGGACAGTTCTAGAAGTGTTTGACCCGATGGACGAGTCGAAATCCAAGATCATCATCAAACAAGAGCCCAAGCGGAGAAAGCGGGACTACGTCTGTCCGACCTGCAAAGTGGACCAAGTTACCGATGTGGCCTTCCATCAACATCTGAAGATACATCCCCTGGAGTGCCTCACCTGTGGGAAATGCTTCTTCAGGAGAGCCAACCTTGCTCTGCACATCAAGACGCATCTGGGGATTAAGAACTATAAATGCGAGGTGTGCGAGAAGCGTTTCCTGACGCGGCAGAAGTTGCTAGAACACCACAACGTGCACACCGGCCGCGCGCCCATCAAGTGCACTGTGTGCGACTGCACCTTCAGAAGATACTCGAATATGCTGCAGCATCGGGACCGCCACCACATGCACAAGAAGCCCAAGATCCGCGACTATGTGTGCCACTGCGGCGAGATCTACCACTCGCGGGCCAAGCTACGCTGGCACAAGGAGACCCACGACGGCAAGCCCAAGGCCTGCCAGTACTGCAGCGACAAGTTCATACACCTGTCCAGTCTAACGAGACACGTGCGGCGGACGCACAATGCGTACTTCATGAGAGATGATTTGAAGAAGAATGAGAATGTGCCGTGTCCGGTTTGTAAACAGGTATACCTCCGCTCGAACCTCAAAACGCACATGCGCACGCACAGCGGCAAGCGTCCCTACCACTGCGTGATCTGCAACAAGGCGTTCACCACGCAGTGGAACCTCAAGCTGCACCGCTGGACCCACATGTCGCGATCCGCCAAGCCCTTCAAGTGTTCCCTGTGTAAAGGCGCCTTTATCCGCCAATCAGAGTACATCTCGCACATGAACGCACATAAATCTGTACGCCCGTATACGTGCAATTACTGCGGCTGCCAGTTTATCAGGAAATACAACTGCCAACGCCACGTTAAAGAACACGAAACGGCGAAGAAGTACGTCTGTAAAGTGCCCGATTGCGGTAAGTCGTTCCACAGGAGTTACTATCTATCTGAGCATATGAAAGTCCACAGTGGGGCGCGGCCGTTCTCGTGCAATATTTGCGGGAAGACGTCCAGTAATAAGTCGAATCACAATAAGCATGTGAAGATTCACCACGCGCGCGAACCCGTCGCCACGGAGGCCTAG
- Protein Sequence
- MDQVVQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCSLSSNRSSYGSRASTPVHSERSYRSRSRTPATEEAARWNTPHSTDHERFWRRTPSRTPKTSTVTRVETPDLRIGDSNFDSSGSINTSNSVFSNPSKSEKPPQPYPSVPVSDYEQPYSYFPEQKEKKEIKYSRSAEYNSQNNTNSVYAYNMTTPCVRLNALLPAQKRNEPVNMLPTNKNQDFIKLLPKSRNIALVKANVGTMQYIAPGVMVSSGPTFVQKNNPNNLIVTSNLQNPMVQSKSITTPLSSHQYNQMAPSPFAPNTTVVTQNSQIIYSEMVHSIDAKRFIPGGPAAMAQENITNVSQTSSMYQNVMVVDQFGNTSCMYSTPQQLLPKPSTSYNQSVPTLDKNVDSNKTLIIEVSPIVAPPPVEVCDASTSMAPRKETTDEYPPEKPEPSGSTKGLKILSNIKVEVPVQHHKNLLNTVVDLTGPTECVYPNRTKSPERILPDIEVTITQNNVETQPSALNSNECIVTNTFSVIKNVGNPPTYKEAKMDHKIHETESSDSCPVPDLICNEKPSISPCSELSDNGDNATAMASISLKPEPSSSVDIKKEAGIPVRSFRSNPLRLNNIYVKKHKKVLQIKNAKSFPVASTSTSIEVVNLSSSQSSRLPEDFKMTKIVNHSDKLDNDDSRGSRLETVSINKLNEHEHEFDADTEEQSMDMELEPVGGYPPSPARYPSAPASPSTIDLTQVKEEVNSNDFSNQTGESEREFTPLQALRAPRARYENRDLLDLEAAKSKQFVSMMNDNYFGDNIYADYFTPDRVESFDAHGSSASFGKEVPKDGVYLWGEPSQKESEFVLPNFMPDGYKLPDGAEFALGRGECKAGVLERAEPALDICADERMPPRGELSGQESNGDMDAPWNGMYQEVTPAEPYDLIARESWISDGSEIDSNEKRDSLEEEQPKPRLFNCLACGLHLPSMKELRTHRAEAHPPPGGSADNTTYSRLMIKKVIKKEDKTDEQVLAGMLQDSKAGITGTVLEVFDPMDESKSKIIIKQEPKRRKRDYVCPTCKVDQVTDVAFHQHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCEVCEKRFLTRQKLLEHHNVHTGRAPIKCTVCDCTFRRYSNMLQHRDRHHMHKKPKIRDYVCHCGEIYHSRAKLRWHKETHDGKPKACQYCSDKFIHLSSLTRHVRRTHNAYFMRDDLKKNENVPCPVCKQVYLRSNLKTHMRTHSGKRPYHCVICNKAFTTQWNLKLHRWTHMSRSAKPFKCSLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVKEHETAKKYVCKVPDCGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -