Basic Information

Insect: Plutella xylostella
Gene Symbol: -
Assembly: GCA_905116875.1
Location: CAJHNJ020000483.1:4254750-4259956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.035 2.7 9.3 0.9 3 23 337 358 335 358 0.92

2 9 0.022 1.6 10.0 2.8 2 23 429 450 428 450 0.96

3 9 4.6e-05 0.0035 18.4 0.0 1 23 454 476 454 476 0.96

4 9 0.00041 0.031 15.4 0.5 1 20 481 500 481 504 0.90

5 9 0.0032 0.24 12.6 0.3 3 23 513 534 512 534 0.91

6 9 0.00062 0.047 14.8 1.8 2 23 542 564 541 564 0.96

7 9 5.3e-06 0.0004 21.3 4.6 1 23 570 592 570 592 0.97

8 9 7.5e-07 5.7e-05 24.0 1.6 1 23 598 620 598 620 0.99

9 9 0.0047 0.36 12.1 4.6 1 23 626 649 626 649 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.035	2.7	9.3	0.9	3	23	337	358	335	358	0.92
2	9	0.022	1.6	10.0	2.8	2	23	429	450	428	450	0.96
3	9	4.6e-05	0.0035	18.4	0.0	1	23	454	476	454	476	0.96
4	9	0.00041	0.031	15.4	0.5	1	20	481	500	481	504	0.90
5	9	0.0032	0.24	12.6	0.3	3	23	513	534	512	534	0.91
6	9	0.00062	0.047	14.8	1.8	2	23	542	564	541	564	0.96
7	9	5.3e-06	0.0004	21.3	4.6	1	23	570	592	570	592	0.97
8	9	7.5e-07	5.7e-05	24.0	1.6	1	23	598	620	598	620	0.99
9	9	0.0047	0.36	12.1	4.6	1	23	626	649	626	649	0.97

Sequence Information

Coding Sequence: ATGTGCCTAAAGGTGCTAGAAGCCTCGCTGCAGGCAAATTATCGCATATCATCGAGAGATGCATTCAAAGTAATGATACTGAGGACTGGTATCAGCTGCTTACCTTTTCCTACTCATCTCTTAGAATACCCTCGTCAGAAGACCGAAACCGTTCACTTACCTCTAAATCGAGGGTTGGACTTCCCCCCGGAGCCAAACCAAACCAACGAACCCCTGGTGGTGGATGTTCCGGACGTAGCACAGGTCATTGCAACGTTTCACAACGGCTCTGCTGCTGGGTTGGATGGTCTAAGGCCGGAGCACCTAAAAGAGTTGACCTCCGCCAGTGCTGGTGACGGTGGAGTCAGGCTTCTACGCTCCCTTACCAATTTGGCCAACTTTATGCTCAAGGCCTCCCTGAGCTCTCCGCTCAATGTCTGGTATCTCGATGATGGCACTATTGGAGGCAGTCCTGAAATGGTGGCTGAGGATCTCAAAAAACTCATGGATGGTTTCAGGGAGATGGGCCTTCAGGTCAACTCTAATAAGTGCGAGCTGTTCTTCTGCTCAGAACAATCCTCAGAAGCAGTTTTGGACGAGCTTAGTGCCATGCTACCGGGTATCAGGGTACTGAGCAAGTCCAATTTCAGGCTTTTAGGCGCACCGATTTTTCCCGAAGGTACACAGAATTGGGATGGACAAATTGTTATCAAAATTGAGCCCATCCAAGCCCCGGCCGCAGACAGTGGCGCATCACAAAACAAAGATATTAGTGAAGAGCGTAAACGTCAAGTTACGGTCAAACAGGAAAAATCCAAAACTGTAAAAAATATTAGACTGAAGGATGGAAATAAAATTCAGTTTAAAAGAGACTCGGTCGATAACAGAAAACCCAACCCAGAACTAGCAAAACGTGAACATTTTAAAAAGAAGAAAGAGGAATTCGCTAAACATAGAAGTAACATCCAAACGATTCTAAAATACACGAACGCGACTCCAATACTTAATAGAAACACACTCGGCTACGGATGTTGTTTCTGCTACGAACAATATTCTCAACCGGGAGACTTGAAAAAACACACACTTGAAGCCCACAACGAAGATAAACTCAAATATTTGGAGGAAAAAACCCTCAGGTGTTACGTGGCACGAATAGACATAACTGCACTGAAATGCCAACTCTGCGACGCAAAAATAGATAGCATAGAAGAAATGGTGAGCCATTTACAAGACCCACACAAGAAGCCATACTTTACAGACATAAAGAGTAGAGTAATACCGTTCAAATTCGACAATGACACACTAAGCTGCGTTTATTGCTTGAATCGTTTCAGTCAATTCAAACTGTTGCAAGACCACATGCACACACATTTCAGGAATTACATTTGCGCTGTATGCGATAAAGGATACGTCAACGCAAGTAACCTACAGGCTCACAGCAACTTGCACAAAACTGGCGAATACCCTTGCACTGTCTGTGGGAAAATGTTCAGCAGTTTAATCAGTATGAAAAATCACTTTGGGCAAAGGCATAAATTTGAGGGAAAAACTGCTATCTGTCCCCATTGCGGCGAGAGATTCGGGTCGAATCGAACTAGGAACGCTCATATGGTAGCTGAACATGGAACGACCCCAGTTCTCTTGAAATGTCAAGCGTGTGACCAAACCTTCCCGCACCAAAGAGCCCTCTTACGACACACCAAAAGAGACCACCTAATGGAGCGAAAGCATTCGTGTAAAGAGTGCGAGAAATCGTTTTTCTCCAAATCGTCATTGCAGTCTCACATGACGACTCACACTGGGGTGAAAGACTTCAAGTGCGATGTTTGTTCGAAAACCTACGCTCGCAAGAAGACATTGACAGAACATATGAGGATACACAACGATGACAGGAGGTTCAGCTGTGCGCACTGCCCGTTGACGTTTGTGCAGAAGTGTAGTATGAAGGGACATATGAAGTCTAAACATGGCGTCGTTGAGTAA
Protein Sequence: MCLKVLEASLQANYRISSRDAFKVMILRTGISCLPFPTHLLEYPRQKTETVHLPLNRGLDFPPEPNQTNEPLVVDVPDVAQVIATFHNGSAAGLDGLRPEHLKELTSASAGDGGVRLLRSLTNLANFMLKASLSSPLNVWYLDDGTIGGSPEMVAEDLKKLMDGFREMGLQVNSNKCELFFCSEQSSEAVLDELSAMLPGIRVLSKSNFRLLGAPIFPEGTQNWDGQIVIKIEPIQAPAADSGASQNKDISEERKRQVTVKQEKSKTVKNIRLKDGNKIQFKRDSVDNRKPNPELAKREHFKKKKEEFAKHRSNIQTILKYTNATPILNRNTLGYGCCFCYEQYSQPGDLKKHTLEAHNEDKLKYLEEKTLRCYVARIDITALKCQLCDAKIDSIEEMVSHLQDPHKKPYFTDIKSRVIPFKFDNDTLSCVYCLNRFSQFKLLQDHMHTHFRNYICAVCDKGYVNASNLQAHSNLHKTGEYPCTVCGKMFSSLISMKNHFGQRHKFEGKTAICPHCGERFGSNRTRNAHMVAEHGTTPVLLKCQACDQTFPHQRALLRHTKRDHLMERKHSCKECEKSFFSKSSLQSHMTTHTGVKDFKCDVCSKTYARKKTLTEHMRIHNDDRRFSCAHCPLTFVQKCSMKGHMKSKHGVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -