Pxyl023178.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- ZNF131
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000565.1:2524711-2535186[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1 79 4.7 0.0 1 21 254 274 254 277 0.89 2 14 0.00014 0.011 16.8 0.4 1 23 284 306 284 306 0.97 3 14 1.9 1.4e+02 3.9 0.8 1 23 310 333 310 333 0.88 4 14 0.013 0.99 10.7 0.1 2 22 347 367 346 367 0.93 5 14 0.031 2.4 9.5 1.5 1 23 371 393 371 393 0.97 6 14 7 5.3e+02 2.1 0.4 2 22 401 420 400 424 0.87 7 14 0.00018 0.013 16.6 2.0 1 23 432 455 432 455 0.93 8 14 0.0013 0.096 13.9 2.3 1 19 461 479 461 484 0.92 9 14 2e-06 0.00015 22.7 1.5 2 23 497 518 496 518 0.97 10 14 0.00044 0.033 15.3 0.1 2 23 525 547 524 547 0.96 11 14 0.012 0.95 10.7 2.8 3 23 565 586 563 586 0.91 12 14 0.00062 0.047 14.8 4.1 1 23 592 614 592 614 0.98 13 14 0.00022 0.017 16.2 2.2 2 23 623 644 622 644 0.96 14 14 0.0067 0.51 11.6 1.4 1 23 653 676 653 676 0.97
Sequence Information
- Coding Sequence
- ATGATCCAAGCTTGTGTTTTTTGCCTGTCACAAGATAGGAATCTGTCCCTAATGGAAGAATCGCTGTACCTCACTGTTTATCCAAGTTTTAAAGGAGAATATATTGAATACATTAGTTACTTACAAGCTGAAAGACTGCTTAAATTATGTTGGGAATGTCGAGTAAAGGCTTGCAATTTCAAGAAACTCTTACAAACAGCACAAAGAAGTTTAAACAGTTTGAAACTGTTCATGGAATTTTCTTCAGGAGATCTACCAAAGTCAGAGTCAAATCTTCACATAACAACTGTGGAGGCCATAGACATAGCTCCAACTATACCTCTACTCAACCCCGTTATCGACGCACCCAAACTAGAACAGAATATTGATGATGTTGACTTCAAGTTCATAGTTGAACCTTCAGAGATAAAAGACATTAATAATATAAGTCTGAGTGTGGTAAAACTCGAAGACACCCTAGACATCGAAGATAGTAACTTTAACAATGAGACATATTTCAACAACGATGATGATGATGATGACTCTGAGGATGACAAACCCCTGGCGGTGCGGGCGACAGCGCTGGCCGCTATCAAAAGAAAACGATCCAGTAAAAAGGCATTGGACTCAAGCAGAACAAGTACAAGAAAATCAAGGAAAAAGAAGCCACCGACGCCAGCGCCCCCTAAGTTCAGTAAAGTGTGGGCGTCCAGCGAGCAGGCTATGCGCTGGCACCGCGAGGAGCTGCGGCGCGCGCGAGAGGCGAGCCTCAGCTTCGTGCACGAGTGCGACGCGTGCGAGAGACTGTTCGCCGAGGAGGAGGAGCTGAACACACATGTGGGGGAGGCGCATTCTGAGGAGGCTGGCCAGTACACGTGTGATGTTTGTCTATATCGATTTCCGGATCAAACCAAGTTGCAACAGCACATGGAGGCTCACTACATCAACTACAAGTGTAAAAACTGCAGCTTTGAAAGCAGAATATTGACAGAAATGCAAAAGCATGTCGACGAGTCTCACAGTATACTTTTGAAGGCTCCAGACGTGAAAGAAGTGTCTGTGTGCAATAGGTGTAAGAATGAATTTGTATCTTCAGCGGAGTTGAAGGCACATTTGTCAACATGTAGAACATACAAATGCGTGGACTGTGATCAGACATTCCCGGCGGGGCGCGCGTACCACCAGCACCGGCAGAAACACCGCTTGGATCCCGACGGCATCTACTGCGAGGTGTGCAAGATCTACTACAAGGCGACGTGGTACAAGAAGCATCTGCTGACGAGTTTGAAACACGTGTCCAGGGATTCTTTCAAGTACGAGTGTGAAATATGCCATCAGAAGTTCCCGTCGTCGTCTCGTCTGAAACTGCACATGTTCGGCTACCACAAGCGTCTCGGCCCATTCCCTTGCGAACTGTGCCCTAAGTCCTTCTTCAATAGGTCGAGATTGACTCGGCACTGCGCGTCTGTTCACAAGATTGGGCCCGTGTTTGAGAAGGAGAAGAATAAGATGTGTGAAACGTGCGGGAAAGGATTTTCGTCGAACCACCTACTCGCGAACCACATCCGCACGCACACGGGCGAGCGGCCGTGGCGCTGCGAGGAGTGCCCCGCCGCCTTCGCGCAGAACGGCAGCTTCTACATGCACATGAAGAGGATGCACGGGAAGACTATCGACAGGCACGGGAGGGAGACTAGGGCTGATAAGGTGTGCTGCGACGTGTGCGGCAAGGAGTTCAGCGCGCGCTGCACGCTCAAGGTGCACTACGACTACTACCACCTCAAGAAGACCAAGTTCCACTGCGACACTTGCGATAAGTACTGCCGGTCAGCGGCGGACCTGCGCAAGCACGCCAACACGCACGCGAGCGCCGCGCGCGCCGCCATCCCCTGCGACACCTGCGGGAAAACTTTCAAAACTCGAGGGGCGCACACGCAACACATGAAAAAACACGGACTCACCGTAGTGGAGCGGCCATTCAAATGTCGCTCTTGTGACGCGGCCTATAGCGTCCGAACTAACTTGTACCAGCACTACAAGGTCAAGCACCTCAAGCTGAAACGCAACGATCGGATTACCATCAAGAATCTGTTCAATCTGGACAAGGAGATCATTGTTCTTCCCGCGAGAAAGTAG
- Protein Sequence
- MIQACVFCLSQDRNLSLMEESLYLTVYPSFKGEYIEYISYLQAERLLKLCWECRVKACNFKKLLQTAQRSLNSLKLFMEFSSGDLPKSESNLHITTVEAIDIAPTIPLLNPVIDAPKLEQNIDDVDFKFIVEPSEIKDINNISLSVVKLEDTLDIEDSNFNNETYFNNDDDDDDSEDDKPLAVRATALAAIKRKRSSKKALDSSRTSTRKSRKKKPPTPAPPKFSKVWASSEQAMRWHREELRRAREASLSFVHECDACERLFAEEEELNTHVGEAHSEEAGQYTCDVCLYRFPDQTKLQQHMEAHYINYKCKNCSFESRILTEMQKHVDESHSILLKAPDVKEVSVCNRCKNEFVSSAELKAHLSTCRTYKCVDCDQTFPAGRAYHQHRQKHRLDPDGIYCEVCKIYYKATWYKKHLLTSLKHVSRDSFKYECEICHQKFPSSSRLKLHMFGYHKRLGPFPCELCPKSFFNRSRLTRHCASVHKIGPVFEKEKNKMCETCGKGFSSNHLLANHIRTHTGERPWRCEECPAAFAQNGSFYMHMKRMHGKTIDRHGRETRADKVCCDVCGKEFSARCTLKVHYDYYHLKKTKFHCDTCDKYCRSAADLRKHANTHASAARAAIPCDTCGKTFKTRGAHTQHMKKHGLTVVERPFKCRSCDAAYSVRTNLYQHYKVKHLKLKRNDRITIKNLFNLDKEIIVLPARK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -