Basic Information

Insect: Plutella xylostella
Gene Symbol: -
Assembly: GCA_905116875.1
Location: CAJHNJ020000517.1:8617301-8626657[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.4 1.1e+02 4.2 0.1 3 23 107 127 105 127 0.95

2 18 0.55 41 5.6 3.0 2 23 131 153 130 154 0.95

3 18 0.023 1.7 9.9 0.1 3 23 393 414 391 414 0.95

4 18 0.032 2.4 9.4 0.1 1 19 422 440 422 440 0.98

5 18 0.023 1.7 9.9 0.4 2 23 453 474 452 474 0.94

6 18 2.1 1.6e+02 3.7 3.0 1 23 490 513 490 513 0.95

7 18 0.074 5.7 8.3 1.7 1 23 523 545 523 546 0.95

8 18 0.00026 0.019 16.0 0.8 3 23 626 647 624 647 0.96

9 18 0.13 9.9 7.5 0.4 1 23 655 678 655 678 0.94

10 18 0.0003 0.023 15.8 4.6 1 23 684 706 684 706 0.98

11 18 3.5e-06 0.00027 21.9 2.6 1 23 713 735 713 735 0.98

12 18 0.0001 0.0078 17.3 2.3 1 23 740 762 740 762 0.96

13 18 0.0021 0.16 13.2 8.4 1 23 768 790 768 790 0.99

14 18 1e-05 0.00077 20.5 2.3 1 23 796 818 796 818 0.98

15 18 0.0012 0.088 14.0 0.6 2 23 825 846 825 846 0.97

16 18 0.00024 0.018 16.1 3.6 2 23 853 875 852 876 0.96

17 18 0.0054 0.41 11.9 0.0 1 23 880 902 880 902 0.97

18 18 0.00022 0.017 16.2 1.5 2 23 909 931 908 931 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.4	1.1e+02	4.2	0.1	3	23	107	127	105	127	0.95
2	18	0.55	41	5.6	3.0	2	23	131	153	130	154	0.95
3	18	0.023	1.7	9.9	0.1	3	23	393	414	391	414	0.95
4	18	0.032	2.4	9.4	0.1	1	19	422	440	422	440	0.98
5	18	0.023	1.7	9.9	0.4	2	23	453	474	452	474	0.94
6	18	2.1	1.6e+02	3.7	3.0	1	23	490	513	490	513	0.95
7	18	0.074	5.7	8.3	1.7	1	23	523	545	523	546	0.95
8	18	0.00026	0.019	16.0	0.8	3	23	626	647	624	647	0.96
9	18	0.13	9.9	7.5	0.4	1	23	655	678	655	678	0.94
10	18	0.0003	0.023	15.8	4.6	1	23	684	706	684	706	0.98
11	18	3.5e-06	0.00027	21.9	2.6	1	23	713	735	713	735	0.98
12	18	0.0001	0.0078	17.3	2.3	1	23	740	762	740	762	0.96
13	18	0.0021	0.16	13.2	8.4	1	23	768	790	768	790	0.99
14	18	1e-05	0.00077	20.5	2.3	1	23	796	818	796	818	0.98
15	18	0.0012	0.088	14.0	0.6	2	23	825	846	825	846	0.97
16	18	0.00024	0.018	16.1	3.6	2	23	853	875	852	876	0.96
17	18	0.0054	0.41	11.9	0.0	1	23	880	902	880	902	0.97
18	18	0.00022	0.017	16.2	1.5	2	23	909	931	908	931	0.96

Sequence Information

Coding Sequence: ATGTCTTCAGACGACTCCGAAGATGAGCCACTTTCAGTTCTAGCGGCTAACAAGAAACTCATCTCAGAACCACCTGAATCAGAAGAGAACAGCGATGAGGAAATCGACAACGATATCATTCCTCGGAAGAAAAATAAACCTGGCCCAAAACGTAAAAAACTCTTCACAACTCCATTAGCTGAGAGGCCTATGGATGTGTGGCTGTATCTCAAAGATTTTAACCTCACGGGTCCATTTAGCTGCCTCTTGTGCCCCGAGTGGTTCATTAACAGGGCTAAAGTTGTTACTCATTATATTTTAAACCACAAAAAGGATTTCTGTGGAATTTGCAGATATTTTGTGCCAGACAGAGAAGCCTGGAATACTCATCAGTTATTCCATGTACCGTGGCAATGTTCACAGTGTATCCAGAATTTTGAAACAGAGTGTGATCTCCGCCAACATTTGAGCACCGAACACCACCTGGTGTACTGCAGACTCTGCTTCTTCCGGACGCCTGACAATGACCAGTACAACTGTCATTTGTTTGAGAAGCACAATGTGTCAAATATCACTAGTAAAAATGCTGAAGTCCTCTGGGAATTGGAATATGACGGATGCACCAAGTTTCTGTGTCTCCTGTGCTCAAACTCCAACATCCAGCACACAGACTTCTTCAACCATTACATGAGTTTCCATAGACTGACTCTCAAATGTTTCACTGCCTTGCTCTCAGGCAAAGATCCCCCATTCACCATAGTTGGGGCTAACTTAAGTCTGGAGTTTGTGAATAATTTAAACCTGCAGACCAGATGTGGGTATGTAGACTTTGATAATAAACCTATTGAAGACCCTGAACCTGAAAACTTTGATGATAACTTCATGCAAGCTCTCATACCTGAAGTGAAACAGGAAGTCAGCAGTGATCATGAGGTGGCTGATAAAGATGCTAGCAAAGATGAAACAAAATCAGTAAAACGAAAATGCTACTCTGATGATGATGATGAAAATGCTCTCTGGAAAACATACTTTGGTGATGAAGACTTTGATGTAACATCCACTGAAGTGATTGTGCTCCAGAAATGCTACTTTGAGTATGTGAACAAAACACTGATGGATATCAATTCTAATATTGTACCAGAAATATCAGAGATAAACTATGAAAGTACCAAAAATGATTTCATAATGGACATAGACTGTCCTTTGTGTAAGAGTAAATTTGAAACAGCACCTGATTTTACAGCTCACATAGCAAAGATGCATAATGTGAGAACTTTGCCTGTCTACTCTTGCCGGGTGTGTGCCACCACTTTTGACACGGAGAGTGAGTTAACAGTCCATTGCATAGGAGAGCTAGGAGACTTCGAAGACTTGTGGATCTGTCAGTTTTGTGAAAAAGAGTTTGACTCCAGAGACGCCACTCGCAGGCACTTGACTGAGCACTGGAGCAGTCTGGATGCAGACAATTGCTTTAGCCCTCATTTAGGTTTCAAGTGCAAATACTGCCCTTGCTTGTTCTGGAATGAGACTGAAAGGGAAGCACATCAGAAGAAGAACCATTTTGACACAAAACACAAAGAGGAGTTCTACAAGTGTGAATCTTGCTCTGAGTTGTTTAGTGATAAGGTATGGTTCATATACCATTACTTGGAGCACCATCACACCGAAGACACGGAGCTACCTCAATACCTGATCAAGTGCTGCTTCTGTTGCATAGTCCTCGGCAGTGTGGACGACATGCGGATACACTTCGGAGCTGAACACAAGGATGCTACGAAGATATTCTGCTCTATAGAGCCGTGTAGCTATAAACCCTTGGCCCAGAGGAAGTCTTTCAAGTTCCATTTGAGGTCCATGCACCGCCCGCCCGACCTACACCCCTCCAGACGCATATTCTGCCCGGAATGCGCCCGTGAATTCAGCACGCACAAGGCGCTCACTGCACACACGCGGCGCATACACGCCGGCGCCGGCGCGGGCAAGTTCAAGTGCAAGTTGTGCCCGGCAGCTCTGACTACTAATGATGAGAGGAAACTTCACTACCTACTCCGCCACCCGGGCCGCAACCCATTCGAGTGTGACGTGTGCCACAAAACATTCAAATACAAGTCTTCAATGTACACACACAAGGCCACACACAAGACCAACCAGTGCACGTATACTTGCTCGTATTGCAACAAGACTTTCTCGAAGCGCGACTCCTACCGCGAGCACATCCAGATCCACGAGGGTCCTCGCCACGCGTGCTCCTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGAGACGGCACACGGGCGAGAAGCCGTACACGTGTCATCACTGTTCTAGAACATTCTCGGATAAGGGCGCTTGTAGCAGCCATATGAGAACGCATGTGAGGGACAAAATATTTTCCTGCATGTACTGCCCACAAACCTTCGTGCAGAAATCTAAACTCACCTACCACATCCGGAAACATACTGGAGAAAAGCTGGAGACGTGCGCGGTGTGCGCCAAGGTGTACACCAGCGCATGCGCACTGCGCGAGCACATGAAGTCGCACAACAAGAACGCGCAAGTGCCGTGCCCTATCTGCAAGAAGCGCTACCGCGACCACCGCTACATGATCCGGCACCTGCGCACGACGCACCACCGCGCGCAGTACCCGTGCCCTCTCTGCCAGAAGCAACTAGCCAGTGCCGTGGCGTTGAGGAGCCATGTCGTCACGCATTGCACGAGGAAGAATTTACAGTGCAAACTCTGCCCAAAGTCGTTTACAATCAAGAAGTCAATCTTGAGACACATACGCCGGCGCCACACGGCCAAATTGGCAGAATTTGGCGGCAACACCAAAGTGTTCATAGATGTAGTAGACGTGAGACGAAGCGTCGCCAAACTGGGCCTTGATGAGGAAATGATAACCCGCATCTTCGGCCCTCCCAAAGAACCTCAGCCAGAGGTCATCACTGACCATTTTGTCAACATTCCCCCACCTGAAATGGTGGTTACCAAAGAAGAACCACTGAGTGAAGAGGAAAATCTTTCCGGTGATGATGATGATGATGAAGATGAAGTAGACGTTGATGCCAAAAGTGACTCTGATTCTGCGAAAAGTACTGATAATAAGAAAGCAGAGATTAAGAGTGAGCCGCATAGTCCTAAAAGCGAATCTGAGTTGGAGCCAACTGATTTTGTTAGTGTAAAAATTGAACCAATAGATATGGATGAAAATCCATAA
Protein Sequence: MSSDDSEDEPLSVLAANKKLISEPPESEENSDEEIDNDIIPRKKNKPGPKRKKLFTTPLAERPMDVWLYLKDFNLTGPFSCLLCPEWFINRAKVVTHYILNHKKDFCGICRYFVPDREAWNTHQLFHVPWQCSQCIQNFETECDLRQHLSTEHHLVYCRLCFFRTPDNDQYNCHLFEKHNVSNITSKNAEVLWELEYDGCTKFLCLLCSNSNIQHTDFFNHYMSFHRLTLKCFTALLSGKDPPFTIVGANLSLEFVNNLNLQTRCGYVDFDNKPIEDPEPENFDDNFMQALIPEVKQEVSSDHEVADKDASKDETKSVKRKCYSDDDDENALWKTYFGDEDFDVTSTEVIVLQKCYFEYVNKTLMDINSNIVPEISEINYESTKNDFIMDIDCPLCKSKFETAPDFTAHIAKMHNVRTLPVYSCRVCATTFDTESELTVHCIGELGDFEDLWICQFCEKEFDSRDATRRHLTEHWSSLDADNCFSPHLGFKCKYCPCLFWNETEREAHQKKNHFDTKHKEEFYKCESCSELFSDKVWFIYHYLEHHHTEDTELPQYLIKCCFCCIVLGSVDDMRIHFGAEHKDATKIFCSIEPCSYKPLAQRKSFKFHLRSMHRPPDLHPSRRIFCPECAREFSTHKALTAHTRRIHAGAGAGKFKCKLCPAALTTNDERKLHYLLRHPGRNPFECDVCHKTFKYKSSMYTHKATHKTNQCTYTCSYCNKTFSKRDSYREHIQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGEKPYTCHHCSRTFSDKGACSSHMRTHVRDKIFSCMYCPQTFVQKSKLTYHIRKHTGEKLETCAVCAKVYTSACALREHMKSHNKNAQVPCPICKKRYRDHRYMIRHLRTTHHRAQYPCPLCQKQLASAVALRSHVVTHCTRKNLQCKLCPKSFTIKKSILRHIRRRHTAKLAEFGGNTKVFIDVVDVRRSVAKLGLDEEMITRIFGPPKEPQPEVITDHFVNIPPPEMVVTKEEPLSEEENLSGDDDDDEDEVDVDAKSDSDSAKSTDNKKAEIKSEPHSPKSESELEPTDFVSVKIEPIDMDENP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -