Basic Information

Insect: Plutella xylostella
Gene Symbol: -
Assembly: GCA_905116875.1
Location: CAJHNJ020000564.1:3650977-3658680[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.035 2.6 9.3 1.5 3 23 655 676 654 676 0.95

2 21 0.066 5 8.4 0.3 1 21 1066 1086 1066 1087 0.96

3 21 7.6 5.8e+02 2.0 0.3 1 22 1129 1150 1129 1152 0.82

4 21 0.039 3 9.2 1.0 2 21 1162 1181 1161 1182 0.95

5 21 4.6 3.5e+02 2.7 0.1 2 23 1190 1212 1189 1212 0.89

6 21 0.077 5.9 8.2 0.2 3 23 1232 1253 1230 1253 0.96

7 21 0.0078 0.59 11.4 2.2 1 23 1259 1282 1259 1282 0.93

8 21 0.35 27 6.2 0.0 1 23 1308 1331 1308 1331 0.90

9 21 0.51 39 5.7 5.4 1 23 1336 1358 1336 1358 0.96

10 21 0.00028 0.021 15.9 1.5 1 23 1377 1399 1377 1399 0.98

11 21 0.0002 0.015 16.4 1.8 1 23 1418 1441 1418 1441 0.97

12 21 0.0059 0.45 11.7 1.7 1 23 1505 1528 1505 1528 0.96

13 21 0.002 0.15 13.3 1.4 2 23 1558 1580 1557 1580 0.95

14 21 1.6 1.2e+02 4.1 0.0 2 23 1586 1608 1585 1608 0.95

15 21 0.016 1.2 10.4 0.1 1 21 1658 1678 1658 1679 0.95

16 21 0.0014 0.11 13.7 0.6 1 23 1690 1712 1690 1712 0.93

17 21 0.00013 0.0096 17.0 0.3 2 23 1790 1812 1790 1812 0.93

18 21 3.7e-07 2.8e-05 25.0 1.2 3 23 1819 1839 1818 1839 0.98

19 21 0.2 15 6.9 0.0 1 23 1870 1892 1870 1892 0.97

20 21 0.37 28 6.1 0.7 1 23 1898 1921 1898 1921 0.94

21 21 0.00029 0.022 15.9 0.4 1 23 1931 1954 1931 1954 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.035	2.6	9.3	1.5	3	23	655	676	654	676	0.95
2	21	0.066	5	8.4	0.3	1	21	1066	1086	1066	1087	0.96
3	21	7.6	5.8e+02	2.0	0.3	1	22	1129	1150	1129	1152	0.82
4	21	0.039	3	9.2	1.0	2	21	1162	1181	1161	1182	0.95
5	21	4.6	3.5e+02	2.7	0.1	2	23	1190	1212	1189	1212	0.89
6	21	0.077	5.9	8.2	0.2	3	23	1232	1253	1230	1253	0.96
7	21	0.0078	0.59	11.4	2.2	1	23	1259	1282	1259	1282	0.93
8	21	0.35	27	6.2	0.0	1	23	1308	1331	1308	1331	0.90
9	21	0.51	39	5.7	5.4	1	23	1336	1358	1336	1358	0.96
10	21	0.00028	0.021	15.9	1.5	1	23	1377	1399	1377	1399	0.98
11	21	0.0002	0.015	16.4	1.8	1	23	1418	1441	1418	1441	0.97
12	21	0.0059	0.45	11.7	1.7	1	23	1505	1528	1505	1528	0.96
13	21	0.002	0.15	13.3	1.4	2	23	1558	1580	1557	1580	0.95
14	21	1.6	1.2e+02	4.1	0.0	2	23	1586	1608	1585	1608	0.95
15	21	0.016	1.2	10.4	0.1	1	21	1658	1678	1658	1679	0.95
16	21	0.0014	0.11	13.7	0.6	1	23	1690	1712	1690	1712	0.93
17	21	0.00013	0.0096	17.0	0.3	2	23	1790	1812	1790	1812	0.93
18	21	3.7e-07	2.8e-05	25.0	1.2	3	23	1819	1839	1818	1839	0.98
19	21	0.2	15	6.9	0.0	1	23	1870	1892	1870	1892	0.97
20	21	0.37	28	6.1	0.7	1	23	1898	1921	1898	1921	0.94
21	21	0.00029	0.022	15.9	0.4	1	23	1931	1954	1931	1954	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACAGCCGATTTTTCCTACCACCAGTTCGGATGAGGCGGAACCTTCCGTCCTCGCATCAAAAATCAAGGATTGCGTGTCTGTTCAGATAACCGAGAATGACGAGTTGCCAACGTGTGTCTGCAGGAAATGCATGGACAATGTGAATAACTGGCACATTTTTAAGAAAGTATGTGAAAGGACACAAAACAAGCTACAATCATTGGCTAAAAAAGATGGCAACCAACTAGAAGAGGTTAAAATTAAAAGTGAACCCCTCTCTGATGAAGCATATGATGATGGAGTGGTTATTGATGGATCATACCCTGATGCTGAACAGAATGCCAGCTCCTCAGCAAAAGTGCAGCCAGAGGGGCCACCAATCTTGGCTTCATTGGGTCTCACGCCGAGGAGTGATAAGAACTGTGTAGACCCTCGAATGGACTGGCACCGAGTCCATGCTATACTGGACTTGGTTCAAGATGACGAGGTCATTGACTCGCTGCAGACAAGTGAAGAGTGTGATGTCGTTCAGCAGTCCGACCACAACTCGGACACTGAGGTCGAGTTGATATCAGACATTGATGATGATTATGTAGATTGTAAGAATGGCTATGTGTCCAAGGACAAAACTGTAATGGCCAAGGATCCCAGGGCATCACGCTCCAATTCAAATGTAAACACTAGACAACCACTCCAATTGAGGAAACGGAAAGCCACTGATGTGAAGCACTGTCCTCGACCCCAGCATGCCTGGCAGCTGTTGTTTACTGATGACATTCTAGAGCTTATTGTAGAGTCTACCAATGAGAAAATACTGAAGAGAGGTCACGGCTACTCCAACTCCATATCTGTCGAGGATATTAAAGCATTCTTCGGAATCCTTTATCTCCATGGCATCATGAGACCTACTCATCAAAAGCGGAGCGATCTATGGCATGAAAAATATGGCATTTCAATTGTACGGAATTCTATGAAGCATGAAAGATTTAATTTCATTTTGCAAAATATTAGTTTTGACAAAGAAGATGACGAGGAAGCCATGATGCAGTATGACACGATGAAGCGAATGCGTAAATTCTTTGAAATCTTTGCCATGAATTGTAGGACCGTATTTGAAGTGGAAAAGATTGCAGTTGTGGACGAGGTCGTGGTGCCGCTGTACGGACCTTGCCCGTTTCGTTACGACATTGATAAGAAACCATTGAAGCTAGGCATGAAATTGGTTTTGCTTGTTGATCCTGATAATTTTTTCATAAGCAATCTGGACGTTATTACTGACCCATATTTCGGGCCCGAAGAAATTGTTAAGAAGCTGGTCCAACATCTAGCGGGGACGGGTAAAACAATAATCATGGATAGCTGGTACACATCTTGTTCGTTGATGGAAAAGTTGAAGAATGAGTATCAACTGTACTCTATCGCGGCATTGAATCCGTCGGACGAGGTCATACCACCTTTGTTTCTCTCGAGACTTAGGAAATGTCGCACGTTTATGACTGGATTTCTTGATAACGAAACTGCTCTGACGTCCTACGTGACCAGTAATGAAAAATCTGTAAATGTGCTGACTAACCATCCGAATTTTTACAAAAGAGGTCACGCTAATCACACGACCCCCGTGTCTGTGTATAAAAAGAACCAATCAGCGGTGGAAGTGGTGGATGTACTCATGCATTACTACACCACCATGCAGTGTAGCAACGACTGGACACTTTCTCTGCTATTCACGTTGTTAAATATAGCGTCAGTCAATGCACAAGGAGTGGAGAGCGAGAAAGAAGAGGACGAGGAATATGAAGAGGAAGTGACGGAGGCCCCTCAACTGCCGAAGGTGCCCAACATGCCCGAGGTGTCCATCACGGTGATGCGGCCCACGGGGGAGACGCTGCACTCGCGGCAGGGCATCCAACAGCTGGCGTCCAAGAACTGCCTGGTCTGTGACCGCGCCTACAGGTATTCACACAACGCGCGCCGCCACGAGCTCACGTCGCACGGCTTCGACCGCTACACCAACAAGACCACGCAGGTCAAACGCAACTCCCAGTCTCACATGCAACCTAAGTTACGGCCCAACCCGTTCAACCCGAAAGCGAGACTCATGCCTAACCCAATCAGCCACAAAATGCAATTGTTACCCAAGTCTATGCCGGGCAAAATGGTGCCACACAAAGTTTTCCCCAAGCCGGTACCTGTGAAGACTATGCCGCAGAGAAATGCACAGAACAACTTGCCATACCCGCTCCGTATTAAGGCGCTGAAAGATTTACAGATCAAGAAAAAAGAACCACAAATACTGAAAACTTTATTGACGACTAAGCCTGAGGTTCTAGTGTCGGAGCCGGAAATTCTAAATTCTGGGCCCGAAAGTCCTGAAACTTTAATATCTGAGCCGGAAATAGCGTCATTCCAAGTGGAAGCCATACTTACAGAGCCAGATGCATTCGATCATCAACCAGGTGACGATGAAATGGATGGTGAAGCTCATGGAAACAACCAGGGTGCGTATGACACTGTCGATATGGAGTCTGACCATGAAATAGAAATAGCCAGACAGCAAGAAAATGAAATGGAAAATGAACAAAATGACGACCAATACGGTGATGAGAGAAGTGACAATGGACAAAACGCGGAAGAAAATCACACTGAGGAAAACCATCACGACAATAATGAAGATGGTGAAGAAGAAAATGAAGAGGGTGAGATGGACCAGTCTGGTGAGATGAGACACGACGAAGAAGGAAAAGACGGGGAAGACGGTAATGAAAATGATGATTACCAAGATGCAAATCATGAAGAAAATGATGAAGACATGGATGACGAGGAGGAAATGGCTTTCGCTCCAGTTGTAGAAATTAACGAGGATATGCAAAACAATTCACTGGACAATAGCGAGATGAATGACGGAAATGAGGACGATGATAACATTGACGATGAGCTCGATGAATCAGGCGACGTCAACGACACTGTCGACGGCGTCGAGGCCAAGGAGCTAGACCCCGACAAGCTCTACGTCACGAAGACGCAAAGAGAGTTCATACTGAAATACCGCGACGTGATTCAGCAAATTAACACCAAGCGTTGCCTGTGCTGCGACCGAGAGTACCCGCGGAGGAAGGCCGTCATACAGCACCTGCAGAAGAACGGGCAGAAGGTGCCCAAGCACACGTGCTACAACTGCGTGGTGACGTTCAGCCACATCGGCGCGCTGCTGAGCCACATGCGCGCCGACTGCTGCACCAACCTGTGGCGCGTCATCTACGAGGAGAACGGCATCACCGACGACATGGTCATCGAGAACGAGCCCAAGGAGGACAAGGTCCAGTACAAGGACATCTTCAACGCGCGCTCGTACGCCTGCAAGCTGTGCCCCGCCAAGTTCCAGCTGAAGCAGTTCATCATGAAGCACGTGCTGGACGTGCACGAGGGCGGCCAGTCGCGCGTGGCCATGCAGTGCGTGCACTGCAGCTCGCGCTTCAAGGACCGCGCGCTCTGGAAGAAGCACATCCGCAACGGCGAGTGCACGGTCTACATCTCGTGCGACCTCTGCGCCGAGAAGTTCGGCAACATGCAGGACTTCAACACGCACGCGCTCGCGGCGCACGCCGGCTCCTTCGACCCCGACTCGCAGACCAAGTGCGTGGACGGCCGCCCCACCGACTGCCCCATCTGCGAAAAGAAGAACGCCTCCTACCCCAACCTCATCAAGCACCTCAAGGTGTTCCACAACGAGGACCGCCCGCACTACTGCCAGAACTGCGACGAGAAGTTCGAGAAGACCGAGGACCTCAACAAGCACATCTACCTGCAGCACTCGGACGAGGCCATGGGGCTCGTGAAGCGCGAGGTGGACCTGTCGCTCGTGAAGGAGGAGGCCGAGGAGTACCACTACTCGTGCACCGAGTGCGAGGCCATCTTCGAGACCGTGGACGCGTGGACCGACCACCAGGTCGCGGCGCACGGGCAGGTGGCGCACCACTGCGACCAGTGCGAGCGCAAGTTCCTGCGGCCCAGCGAGCTGGCGGAGCACAAGCACACGCACCTGCGGCCGCGCCTGCCGCCCGCGCCCGCGCCGCGCCCCGCCGCCGACCTCGAGTTCTACTGCGAGCTCTGCGTGCGCTCCTTCAAGAGCCGCCAGGCCTACTCCAACCACATGCGCATCCACGCCAAGCCCGCCGCGCTGCAGTTCAAGACCGACCTGGTCGTGCCCAACGCGCCCTACTCGTGCGACATCTGCGGCAAGGGCTTCATGCACAAGAAGAACATCTGGAAGCACAAGAAGGTGCTGCACGCGGAGCTGGTGGGCGGCTCGCGGCCCGGCAGCGCGGACCCCGCGCCCGCCTCCACCGAGGAGGACGACGCCGCCGCCGACGAACACTCGCTCTCCACGCCGCAGTTCGACAGCTTCAACTTCGCCGACTACAACAACGCGTCGCCCAAGACGGACAAGAAGCCCAAGACGCCGCCGCAGCCCGGCAGCTACTCGTGCGACCTCTGCTACAAGAAGTTCCCGCTGCGCACCAGCCTGTGGAAGCACAAGCGCGCCAAGCACGGCATCATCAACGCGAGCCACCTGGGCACGGGCGGCGACCGGCCCGCGCCCGCGCCCGCGCCCGCCCCCGAGGCCGGCGGCCGCTCCAGCTGCACCATCTGCAAGATATCCTTCGCCGACAAGAAGTCCTACTACCGGCACCGGAAAAACGTCCACAAGTCGACGTCGCAGGTGTGCAAGCTGTGCGGCATCCCGCTGGGCTCCACGCTGGAGCTGTATGACCACCTGCGCAGCGCGCACGCGCGCGAGCTGCTCGGGTTCAACGCGAGCGGCGCGCGCGGGCTGCCGGGCGCGGCGGGGGCGGGGGCGGGGGCGGCGGGGGGCGCGGGGGCGGGGCTGGACGTGGAGTGCGAGGAGGGCGAGGAGGGCGCGGAGTACCAGGCGCGCTACCCGTGCGAGCTGTGCGGGAAGCAGTTCGTGGGGCTGCTGGCGCTGCAGAACCACCAGTGCGCGGGCCAGGCGGCCGGCGCGCAGCCCTCCACCTTCGACTGCGAGATCTGCCACAAGAGCTACACGTCCATCGCGGCGCTCAAGTCGCACCGCGGCTGGCACCTGCGCTCGCCCGACGGCAAGGCGGCCGCGAACAACAGCGGGCTGTGGATGCCGCAGCACAAGGTCACCAACAAGGTGAGCAAGCACGAGGTGACCGCGCCCGCCGCCGCCGCCAAGCGCCGCCTGCCGCCCGAGGTGGAGGTCACCGTCGTCAACCCGAACAAGAAGATGCGCTCCGACGACTCGCTCGAGATGGACCAGAGCAGCGCGTCCGGCGGCCCCGACGACCGCTACTGCACCATCTGCGACAAGGAGTTCACGAAGCGCGCCGCCTACCAGCGCCACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGCCCCGTGTGCGACCGCAGCTTCACGCGCAAGTCCACGCTGCTGGTGCACATGCGCAAGCACTACGGCGAGGAGGGCGGCGCGGGGGCGGGCGAGGGGGGCGGGGAGGAGTCGGCCGAGTCGGAGGAGGAGCCGGCCGCGCCGCCGGGCGAGTTCACGTGCGGGCAGTGCGGCGACGGCGTGGCCAGCCCGCGCGATCTCATCGCGCACCGCGCCATGCACGCCACGCCCAGCCAGCACTTCTGCGGAGTCTGCAAGGTGTACTTCTCCCGCGGCCCGGAGCTGGCGACCCACACGCGGGCACGACACGGCGGCGGCGAGGGAGAGAAGGTGTTCTTCCCGTGCGCCATGTGCGACCGCTTCTACATGAACAAGAAGAGTCTGCAGAGACACATCGAGATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELQPIFPTTSSDEAEPSVLASKIKDCVSVQITENDELPTCVCRKCMDNVNNWHIFKKVCERTQNKLQSLAKKDGNQLEEVKIKSEPLSDEAYDDGVVIDGSYPDAEQNASSSAKVQPEGPPILASLGLTPRSDKNCVDPRMDWHRVHAILDLVQDDEVIDSLQTSEECDVVQQSDHNSDTEVELISDIDDDYVDCKNGYVSKDKTVMAKDPRASRSNSNVNTRQPLQLRKRKATDVKHCPRPQHAWQLLFTDDILELIVESTNEKILKRGHGYSNSISVEDIKAFFGILYLHGIMRPTHQKRSDLWHEKYGISIVRNSMKHERFNFILQNISFDKEDDEEAMMQYDTMKRMRKFFEIFAMNCRTVFEVEKIAVVDEVVVPLYGPCPFRYDIDKKPLKLGMKLVLLVDPDNFFISNLDVITDPYFGPEEIVKKLVQHLAGTGKTIIMDSWYTSCSLMEKLKNEYQLYSIAALNPSDEVIPPLFLSRLRKCRTFMTGFLDNETALTSYVTSNEKSVNVLTNHPNFYKRGHANHTTPVSVYKKNQSAVEVVDVLMHYYTTMQCSNDWTLSLLFTLLNIASVNAQGVESEKEEDEEYEEEVTEAPQLPKVPNMPEVSITVMRPTGETLHSRQGIQQLASKNCLVCDRAYRYSHNARRHELTSHGFDRYTNKTTQVKRNSQSHMQPKLRPNPFNPKARLMPNPISHKMQLLPKSMPGKMVPHKVFPKPVPVKTMPQRNAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDAFDHQPGDDEMDGEAHGNNQGAYDTVDMESDHEIEIARQQENEMENEQNDDQYGDERSDNGQNAEENHTEENHHDNNEDGEEENEEGEMDQSGEMRHDEEGKDGEDGNENDDYQDANHEENDEDMDDEEEMAFAPVVEINEDMQNNSLDNSEMNDGNEDDDNIDDELDESGDVNDTVDGVEAKELDPDKLYVTKTQREFILKYRDVIQQINTKRCLCCDREYPRRKAVIQHLQKNGQKVPKHTCYNCVVTFSHIGALLSHMRADCCTNLWRVIYEENGITDDMVIENEPKEDKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEGGQSRVAMQCVHCSSRFKDRALWKKHIRNGECTVYISCDLCAEKFGNMQDFNTHALAAHAGSFDPDSQTKCVDGRPTDCPICEKKNASYPNLIKHLKVFHNEDRPHYCQNCDEKFEKTEDLNKHIYLQHSDEAMGLVKREVDLSLVKEEAEEYHYSCTECEAIFETVDAWTDHQVAAHGQVAHHCDQCERKFLRPSELAEHKHTHLRPRLPPAPAPRPAADLEFYCELCVRSFKSRQAYSNHMRIHAKPAALQFKTDLVVPNAPYSCDICGKGFMHKKNIWKHKKVLHAELVGGSRPGSADPAPASTEEDDAAADEHSLSTPQFDSFNFADYNNASPKTDKKPKTPPQPGSYSCDLCYKKFPLRTSLWKHKRAKHGIINASHLGTGGDRPAPAPAPAPEAGGRSSCTICKISFADKKSYYRHRKNVHKSTSQVCKLCGIPLGSTLELYDHLRSAHARELLGFNASGARGLPGAAGAGAGAAGGAGAGLDVECEEGEEGAEYQARYPCELCGKQFVGLLALQNHQCAGQAAGAQPSTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVTAPAAAAKRRLPPEVEVTVVNPNKKMRSDDSLEMDQSSASGGPDDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMRKHYGEEGGAGAGEGGGEESAESEEEPAAPPGEFTCGQCGDGVASPRDLIAHRAMHATPSQHFCGVCKVYFSRGPELATHTRARHGGGEGEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -