Pxyl008732.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- ZNF296
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000483.1:1923531-1934236[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.028 2.2 9.6 0.3 3 23 135 155 133 155 0.95 2 15 0.012 0.91 10.8 1.2 1 23 293 315 293 315 0.99 3 15 4.9e-05 0.0037 18.3 1.1 1 23 321 344 321 344 0.97 4 15 0.004 0.31 12.3 7.3 1 23 349 371 349 372 0.95 5 15 4.8e-05 0.0036 18.3 0.6 2 23 525 546 524 546 0.97 6 15 1.3e-05 0.00096 20.2 1.0 1 23 552 574 552 574 0.99 7 15 0.46 35 5.8 2.1 1 23 649 671 649 671 0.95 8 15 1.4 1.1e+02 4.3 0.1 1 19 678 696 678 698 0.96 9 15 0.00033 0.025 15.7 1.0 1 23 706 728 706 728 0.96 10 15 3.4e-05 0.0026 18.8 2.3 1 23 734 756 734 756 0.98 11 15 1.7 1.3e+02 4.0 0.1 1 13 765 777 765 779 0.91 12 15 4.3e-05 0.0033 18.5 1.0 3 23 820 840 819 840 0.98 13 15 0.0017 0.13 13.4 1.8 1 23 857 879 857 879 0.96 14 15 1.4e-06 0.0001 23.2 0.7 1 23 885 907 885 907 0.98 15 15 7.1e-05 0.0054 17.8 5.2 1 23 913 936 913 936 0.98
Sequence Information
- Coding Sequence
- ATGGAAGTAGACCCGTTAAGTACTGAATGTATAATATTTGAGAGCATTGAATATGCCAAGGATAACGTTGAAGATATAAGCAGCAATGCTGTTATAAAAGAAGAAGAAACTGGGTTCGATTACGTTGAAAAACCTCAACAGAGTGATGGAACAAGTACATTAGTCAAAGATGAAACTGAAGCAACTACGTTAATAGTTTCACCTGTAGTTGATTCAACAACATTGGATTCAACAGAACAGAAAGAACCAAAAATTAAAGTTAAAAAGGAAAAGAAAAAGGAAAAAAAGCTGAAAGACAAGAAATCCAAAGTTAAAATTGAAAAACAACCCAAAAAACGTCAACGCCGAATAGCAAACTATGAAATGCCAGAAGAAATTCCCGGTGCTATACCGTTTTATGGCTGTTCCGTCTGTGATACCAAATACACATCACTTCAAGCGTTACAGTACCACGTAACACAACACAAAGATAGGTTAACCAGTTGGGATTTACGAGTCAAGAACCAACAAATAAAAAAGAAATTAAAAAAAGAAAAAAAGAGGTTAAAAAAACTAAAAGACGGTGTCAAGGAGGAGGAAGTGAAAGTCAAAGAAGAAGTAGAATTGCCCGTAGATTTGGAAGAATTTGTAGAAAATCTAGCCAACAACACAAACGAATCTGCAGATCTTTTAACAAACAACCAAATACCAGCTAGTTTCAATAAACAAAATGACACTACCGAAAATGTTGCCCAAAATAGTGAAATTAATGATAACCAAACTAGTGACAATCAAAACCATTCTAGCGAAAATGTAAATAACTGCAATAACAACGAAACTGAAGAAAACGGAGAGGTGAACAACACGAAGGACCAATCGTTGAACTTGGAGAAAATATTCAAGTGTGGACTGTGCTTGAAACAGTTCTCTCTAGGCTACTACCTCAAGTTACATGTCAGATCTCATACGGGTGAAAAGCCCTACCACTGCGACCAGTGCGGCATCTCCTTCATAACCGCCTCTAAACTGGGGCGGCACCGCAAGCGAGCCCACCTCGCTGTGCGCTTCGAGTGTCGCATCTGCCACCGCACGTACACGCGCCTGGAGTTCCTGACCAGGCATTTTAATAAGCACCATGCAGAGGATAAGATCGAGGGGGAGCCTTATGACTACAACGCCATCTTGCCGTACCTAAAAGAACTAGAAGAAGAACTCCAACGAAAGAAAGAGGAAGAAATTAAACAAAAACAAGAGACAAAAGACGAGTTCTTCCCGTTCTTAGACAGCAAACCAAGCACCGAAGAACTTTGGCCCTTATGCCCGGAGACGGTAAAGCAGGAAATTGAAGTTAAGCCAGAGATCAAGCAAGAGTGTGATGTACAGGATGATGTGATGGATGTGGGAGCCGATGATTTCCACGATAGCTTCCCTGAGGAGGATCTGGCACCGCTGCCTATGAAGAATGAAGACCAATCAGACGAAGACTATTTCCCAGAAGACACCTGGCTTCCCCCCGTCTCACCAAAAATAGAAGTGTCAGACCTAAAGCCCTTAAAGTCTAAGAACAAAAAACTAGGTTCCAATGGTGCACTCCAGTGTGAAATCTGCGAAAAAAGTATTAAGTCACAGTCGTATATGAGGATACATTTAAGGACGCATAGTGGCGATCGGCCGTACAAGTGTTATGTTTGCAATAAAGGATTTATAACGGCCAGCAAGATGAATAGGCATGTTATGACGCATGGCATGGATTGGGATAGTGAGAAACAGAAGGAGGCGGATGAAAGCGCGATGAAGAACGAGGCAGAAGATGCAGATGCAGACGGAGTGAAGGATGAGAACAACCCAAAAGAGCGAAAGAAGAGAAAGCCCGGCAGAAAACGCTCAAAAGTCCCAATACCACCAAAACACAAGCCAGAATACATTAACGGAGAAAAAGTCAACCGACGAAAACAGAAGCGACCACACGCGTGTGAATTCTGCTATAAAAGATTCTTATACATAGAAGCGTTGCAAATACATATGCATGTGCACAACGGGGAGCAAAAGTCGTATGTGTGTAATTTCTGTCTGGATAAATTTGACGATGAAGAGTCTTTGAAAGCTCACGAAGTTTGTCATGGGGGCCCGCAGCCGTATCTGTGTACGATTTGTGGGAGGGCGTATAAGAAGAAGGAGTCTATGGTGTACCACCGGCGCATGCACGACAGCGACAAGAAGTTCCAGTGCGACGTGTGCCCCAAGTCCTTCAACGCACAGTGCAAGCTGCAGCGACATCTCATGAGCCACCGGCCGGACAAGTACGTGGTCCGCTACGAGTGCCCGGTGTGCGCGCACATGTTCAACACCAAAATCCTCCAAGAGAACCGGGGCCAAGTCCTAGCCATGGTGATGCAAAACGCCAGAAAAATACCGCTAGAAAACGACAGTCCATCCTCCCAAAAGAACCTAATACCAAGCGACGAGCGAAGCCGAATATGCAACATATGTGGAGAAATATTCAACCACTTCTACTACTTAGAACAACACTTAAAAACACACGGCTCGAAATTCTCCATAGAAACACAACAGGAGGTTGAAGAAAAGAAGTACATTTGTCAAGTGTGCAATAAAGGGTTTAAGCTAAGTTACTACTTGAAGCTACATAGCTTCACACATACTAAAGAGAAACCGTATATTTGTCAGCAGTGCGGAAAGGGGTTCATTACGAAAGGTAAGCTTAAGAGGCATTTAGAAACACACGCGGGGCTGAAAAAGTACCAATGTCATATTTGTTGTAAGTTCTTTACTAGGCCTAGTTACTTGAGGATACATGTGAGAACGATACATGGCAATCAGGACTATAACTTTAAGGCTGACATGGACTATGATATGGGTATGCCCATTGTGGATAATTGTGGTATGTCAATGACCCATGATAGTGTTTGA
- Protein Sequence
- MEVDPLSTECIIFESIEYAKDNVEDISSNAVIKEEETGFDYVEKPQQSDGTSTLVKDETEATTLIVSPVVDSTTLDSTEQKEPKIKVKKEKKKEKKLKDKKSKVKIEKQPKKRQRRIANYEMPEEIPGAIPFYGCSVCDTKYTSLQALQYHVTQHKDRLTSWDLRVKNQQIKKKLKKEKKRLKKLKDGVKEEEVKVKEEVELPVDLEEFVENLANNTNESADLLTNNQIPASFNKQNDTTENVAQNSEINDNQTSDNQNHSSENVNNCNNNETEENGEVNNTKDQSLNLEKIFKCGLCLKQFSLGYYLKLHVRSHTGEKPYHCDQCGISFITASKLGRHRKRAHLAVRFECRICHRTYTRLEFLTRHFNKHHAEDKIEGEPYDYNAILPYLKELEEELQRKKEEEIKQKQETKDEFFPFLDSKPSTEELWPLCPETVKQEIEVKPEIKQECDVQDDVMDVGADDFHDSFPEEDLAPLPMKNEDQSDEDYFPEDTWLPPVSPKIEVSDLKPLKSKNKKLGSNGALQCEICEKSIKSQSYMRIHLRTHSGDRPYKCYVCNKGFITASKMNRHVMTHGMDWDSEKQKEADESAMKNEAEDADADGVKDENNPKERKKRKPGRKRSKVPIPPKHKPEYINGEKVNRRKQKRPHACEFCYKRFLYIEALQIHMHVHNGEQKSYVCNFCLDKFDDEESLKAHEVCHGGPQPYLCTICGRAYKKKESMVYHRRMHDSDKKFQCDVCPKSFNAQCKLQRHLMSHRPDKYVVRYECPVCAHMFNTKILQENRGQVLAMVMQNARKIPLENDSPSSQKNLIPSDERSRICNICGEIFNHFYYLEQHLKTHGSKFSIETQQEVEEKKYICQVCNKGFKLSYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLETHAGLKKYQCHICCKFFTRPSYLRIHVRTIHGNQDYNFKADMDYDMGMPIVDNCGMSMTHDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -