Pxyl008594.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- ZBTB41_2
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000483.1:647043-653543[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.0017 0.13 13.4 0.2 2 20 169 187 168 189 0.91 2 29 1.9 1.4e+02 3.9 0.4 3 23 197 217 196 217 0.92 3 29 0.0002 0.015 16.4 0.3 1 23 250 272 250 272 0.96 4 29 0.0044 0.34 12.1 2.0 2 21 276 295 275 296 0.93 5 29 0.0013 0.1 13.8 1.0 2 23 340 362 339 362 0.94 6 29 0.086 6.5 8.1 0.5 3 23 370 389 369 389 0.95 7 29 0.12 9.5 7.6 0.3 1 23 395 417 395 417 0.98 8 29 0.0012 0.095 13.9 0.5 1 23 423 446 423 446 0.97 9 29 0.00082 0.063 14.4 0.2 2 23 456 478 455 478 0.96 10 29 0.15 11 7.3 3.8 1 23 489 511 489 511 0.98 11 29 0.00019 0.015 16.4 0.0 1 20 667 686 667 688 0.92 12 29 6 4.6e+02 2.3 0.0 3 23 694 714 693 714 0.87 13 29 0.022 1.6 10.0 0.4 3 23 721 742 719 742 0.90 14 29 0.00084 0.064 14.4 0.2 1 23 747 769 747 769 0.97 15 29 0.058 4.4 8.6 7.0 1 23 772 795 772 795 0.93 16 29 6e-05 0.0046 18.0 0.5 1 23 811 834 811 834 0.95 17 29 0.00015 0.011 16.8 0.9 1 23 840 862 840 862 0.96 18 29 0.63 48 5.4 0.1 2 23 870 891 869 891 0.96 19 29 0.032 2.5 9.4 1.3 1 23 897 920 897 920 0.97 20 29 0.023 1.8 9.9 0.7 3 23 930 951 929 951 0.98 21 29 3e-05 0.0023 19.0 1.3 2 21 1068 1087 1067 1088 0.93 22 29 0.012 0.91 10.8 0.0 1 23 1121 1144 1121 1144 0.96 23 29 2.3e-05 0.0017 19.4 4.0 1 23 1149 1171 1149 1171 0.98 24 29 0.27 20 6.5 1.2 2 20 1175 1193 1175 1195 0.93 25 29 0.00012 0.0088 17.1 2.0 1 23 1221 1244 1221 1244 0.96 26 29 0.00021 0.016 16.3 1.5 1 23 1250 1272 1250 1272 0.97 27 29 0.031 2.4 9.5 0.2 1 23 1278 1300 1278 1300 0.98 28 29 0.0073 0.56 11.5 0.3 1 23 1306 1329 1306 1329 0.94 29 29 0.03 2.3 9.5 4.9 1 23 1335 1358 1335 1358 0.95
Sequence Information
- Coding Sequence
- ATGACCCGCCAAGTGGACGTAAAGGCTCTCGTATCTCACATTGTACGTGGAGATGGCATCGACAAATGCCGTATTTGTATGGGGGACACTTCCGAAGGGCAGGTTTTCTTGGGAGACACCGTGATGCTGGATGGAAACAAGCCTGTGACTCTTGCAGAGCTACTGGAAACTCTCACTGGAGTTGAGGTGCAGTTGGACGGTGCCCTCCCAGCCGGGCTATGCTCGATATGCACCGTATCAGCCATGGAGGCCGGCAACTTCCGGCTCTTCTGCTGCGATGCCAGCAGCCGCTGGGACCAAACCCTTGCACTGATGGAGAACCTTCCAAAGCCAGAAGATATACCACAATATAATAACTCCATTTATTTTGTCTTGAATGACAATGAAGTTACCATTATTAATGATTATAAAGATCCTAAAATATCACAACCAGAGCCTAACTTAACATTGGGTAATAAAATCAAAAAGGCAAGAAAGAAAACTAAATATAGGTTGAGTAAATTGAGTTGCCCTGATTGTGGAAAAACTTTTGACTATCCGCAACACATGGCATTGCACTTCCAACAGTCCACAGATCTGAAACGATGCTGCCCTATGTGCGGGGAGATAATGTATAGAGATGAATTAATTAAGCATTTAGCAAAGGAACACAAAAAGAAGCCTTGCCCATGCCCAAAATGCCCATTTATTGCACTCAGCTTAAGCCAACATTCTGAGCATCTAGCCAAAACTCATGGTCCTAGTTCACACAGCTGCGGAGATTGTGGCCGAAGCTTTCAGTCAATGTATGCTCTGAGTGCCCACATGGGAGTCCATGCCGTCAAGACCTGCCCTGGGTGTGATAAGATGTTCCGTAACCAAATGTGCTACAGATACCATGTCAAACAGTGCTGCAACTTAGATACCACAAGGGAAGATACTCATAGGACCAAAAACAAAGTGACAGTTGAAGTTAAAAACGCTAAAAGCAACAAGAAAATTAAAGTAGGTTTGCGAGGCAGCAGTAACAACGAATGTTTCTGTGACTATTGCGGCAAAAGGTTTAGTGGCAAGAAGTTTGTGGCTGCTCACATACAAATAGTCCACTTAAAGAATACTCATAGGCCTTGTCCATACTGTGGCAAGTTCCTGGCCTCTGCCCACATGACTGAGCATATTAAGAAACATGAACAAACCGTATCATTCACCTGTGAACGCTGTGGCCTCATACTTCGTAGTAGGCTGGGGTATGTGCAGCATCTGCGCCTACATACAGGAGAGATGCCGTACGCTTGTAAATATTGCGGCGAGACATTCTCGGCTTCTTCGCGCCGATCGGAGCACATTAGAAAGGTTCACAAGGCGTCAGAAATTGTCCTGAAACAGGAGTGCAAGTTCTGTCCGGCTCGCTTCCGCTTGCCCTACGCCCTGCGCAAGCACCTGCTGACAGCGCATTCGGACAAATCTGAGGAGCACGAGCCCCAGTTTGAGTGCACCATTTGTCTGGAGAAATTCGGGAGCTGCCGAGGCCTCGTCCATCACAGCAGGAAACACCAGCAGTTTCCAATGAAAGTCTACAACAAGTCGAAAAGGCCTTGCGAAAGCTTAGACGATATTGGAAGTGAAAGCTTCAGCCTACTGACGTGTCGCCTGATGATGATGATGACGGTAGCTCGGTGGTTTCAGATGCGGGAGGAGGCGGGGCTGCCACGGGGCCTCTGCGCGGAGTGCCTGCATCACGCCATAGCCGCCACGCAGTTCCGCCTAGTCTGCATCGAGTCGAACCGCCAATGGCACCAGTCCGTTGACGCCTTCATGCAAATAAACAGGCAAAACGACAACCTAAAGACGGTTTACGCCTTCTATAACACAGACGGGACCACCACAGTCGTGGGCGATCAATTCGGACAAGCCAAAGACAGTAGCGAAGCCTTCGTCAGGCTGACAGACTCGTCGAGCAAGAAGAGAAAGAAAAGAACGCCGCGAAAAAAACAGGCGGTCAAAAAGAAACCCTTGCGTTTTAAATGCCCAGATTGTGGTAAAAGGTTCGCCACACCGCTAGAGTTGGACGAGCACGTCATCAAATCAAACAGACGCGTGTGCGTTATTTGTGGTGAGCTCACATCGCGACCCGCTCTCAGTAAACACTTACTCAAAGCGCACAACAAATCCGTTTTAGATTGCGGCGTTTGTCACAAGTTGTTCGACCAGCAGGATCTCCTGGATCGACATACTGCTGAGAGCCACGGCCTGTACTCGCATACTTGCTCGAATTGTGGGGAGGGGTTCCCGACAGAACGCGCACTCAGCGCTCATCTGTACGTCCATACGCTCTTCCACTGCCCCGTCTGCAAAAAGACGTTCGAAAACCGCAAATGTTTCAAGTACCACACCGCCAACAGCCACAAGATAATTAATCCGTCTCAGAGAATGGAACCAGACGATGAGATGTACATGTGTCATGATTGCGGCGCAACCTACCGTAACAAGCCAGCGTTGCGCATCCATATTATACAGAAACATTTGAAGGTTCTTCCGTTCTCTTGCTCGGTTTGCGGTAAACGAACCTCGACGCTAGGCCATCTCAAATCTCACGAGGCAGTGCACGCGAAAGAGCGTACGTTGATAGAATGTCCGGACTGTAAAGCAAAGATGCGTACGGCGTTAGGGTTTGCGTTGCACCAGCGTATACACACAGGGGAGAAGCCTTACAAATGCTCGGAGTGTGACGAGCGGTTTCTGTCGGCTTCCCGACGGCTGGACCACATGAGACGGAAGCATATGAGTGAGAGTGAGAAGGCGCATGGCTGCACGCAGTGTTCCGCGCGCTTCTTGAGGCCCTTCGAGTTGAGAAAGCACTACAGGACGGCGCATGATGAGCAGTCAGCCGTGGTGCCGCTAGTGGAAGAGCACCTTTGTCCGCAAGGGGTGTGCGTGACATGTGTGACGGCCACTCTGCAGGCCTTCGAGCTGCGCAGCCTCGTCCGCAACTCCGAGAGGAGCTGGAACGACGCGCTGACAGCCCTACGCAAGCTGCCCACCGACGTCAACGCCCCAGTACGCACCATATACGCCTTCGTCAAAGACGACAACGCACACATCCTCAAAAACTATTCAGGGAGCGATTCCCGAACCGCTTTGAACAGACTAAAATCCCGGCTGGTCCATAAAAGAAAAAGAACGGAACGAAAGCCAAGAGTTGCCAGAAACGGACCTTCATGCACCTGTCAGGATTGCGGGAAGGTTTTCTCCAGTCCACATTATTTGAGCGCGCATCTGCAGAACAGCTCCCAGAAGCAGGCGTGCCTCACGTGCGGCGCCGTCGTCATACGAGGCAAGGGAATGAAGGAACATCTGGAGTCAGTGCACGGGGAGGCCCACTATCTGTGTCCAGACTGCCCTCTGCTGTTCCCGTCGCAAGCAGAAGTGGACAAACACAAGAGAACGGCACACAAGTCCGGCGCGCACACTTGCTGCGACTGCGGCAGGAGTTTTCCACGAGCGTCGTCGTTCGAGACTCACCAGCAAATGCACGCTGTGAGGACCTGTCGCACTTGCGGCGCCCAGTTCTCCAACCGGGGCTGCTACCGCGAGCACCGGTCTGCGTGCGAACCCGACGCTAAACCCAACATCAAACTCCTCCGCCGAGATCTCAGATCGAACATCCGTGATCCTGCCACGTACACCTGCGACTACTGCCAGAAGACCTACCATTCCCGCCCGCAGCTAAAGAACCACATCATGTGGATACATATGAACGTGCGCCCGCACCAGTGCCAGTGGTGCGGCAAGCGTTTCTACACGTCCGCTCGTCTGACAGAACATACCATAGTGCATACGCGAGAGAGGAACTTCGAATGTGATATTTGTGGAGCGAAGCTTGTGACCAAGATGGCGATGGTTTACCACAAGCGACGCCACACGGGAGAGAAGCCATACGAGTGTGACGATTGTGGAGAGAAGTTCATATCTGCCTCTCGCAGGTCGGAGCATGCCAAGCGGCGGCACGGCAAAGGAACCATGTTCCAGTGCACTCACTGCCCAAGCCACTTCGTTAGAGGGCATGAGCTAAGGAAGCACGTTGATAAAGTGCATAAAATAACAGCTGATTCAAAGAAGCCCTCAAAGGAAGAAGCTATAACCTCTGATCTTTAG
- Protein Sequence
- MTRQVDVKALVSHIVRGDGIDKCRICMGDTSEGQVFLGDTVMLDGNKPVTLAELLETLTGVEVQLDGALPAGLCSICTVSAMEAGNFRLFCCDASSRWDQTLALMENLPKPEDIPQYNNSIYFVLNDNEVTIINDYKDPKISQPEPNLTLGNKIKKARKKTKYRLSKLSCPDCGKTFDYPQHMALHFQQSTDLKRCCPMCGEIMYRDELIKHLAKEHKKKPCPCPKCPFIALSLSQHSEHLAKTHGPSSHSCGDCGRSFQSMYALSAHMGVHAVKTCPGCDKMFRNQMCYRYHVKQCCNLDTTREDTHRTKNKVTVEVKNAKSNKKIKVGLRGSSNNECFCDYCGKRFSGKKFVAAHIQIVHLKNTHRPCPYCGKFLASAHMTEHIKKHEQTVSFTCERCGLILRSRLGYVQHLRLHTGEMPYACKYCGETFSASSRRSEHIRKVHKASEIVLKQECKFCPARFRLPYALRKHLLTAHSDKSEEHEPQFECTICLEKFGSCRGLVHHSRKHQQFPMKVYNKSKRPCESLDDIGSESFSLLTCRLMMMMTVARWFQMREEAGLPRGLCAECLHHAIAATQFRLVCIESNRQWHQSVDAFMQINRQNDNLKTVYAFYNTDGTTTVVGDQFGQAKDSSEAFVRLTDSSSKKRKKRTPRKKQAVKKKPLRFKCPDCGKRFATPLELDEHVIKSNRRVCVICGELTSRPALSKHLLKAHNKSVLDCGVCHKLFDQQDLLDRHTAESHGLYSHTCSNCGEGFPTERALSAHLYVHTLFHCPVCKKTFENRKCFKYHTANSHKIINPSQRMEPDDEMYMCHDCGATYRNKPALRIHIIQKHLKVLPFSCSVCGKRTSTLGHLKSHEAVHAKERTLIECPDCKAKMRTALGFALHQRIHTGEKPYKCSECDERFLSASRRLDHMRRKHMSESEKAHGCTQCSARFLRPFELRKHYRTAHDEQSAVVPLVEEHLCPQGVCVTCVTATLQAFELRSLVRNSERSWNDALTALRKLPTDVNAPVRTIYAFVKDDNAHILKNYSGSDSRTALNRLKSRLVHKRKRTERKPRVARNGPSCTCQDCGKVFSSPHYLSAHLQNSSQKQACLTCGAVVIRGKGMKEHLESVHGEAHYLCPDCPLLFPSQAEVDKHKRTAHKSGAHTCCDCGRSFPRASSFETHQQMHAVRTCRTCGAQFSNRGCYREHRSACEPDAKPNIKLLRRDLRSNIRDPATYTCDYCQKTYHSRPQLKNHIMWIHMNVRPHQCQWCGKRFYTSARLTEHTIVHTRERNFECDICGAKLVTKMAMVYHKRRHTGEKPYECDDCGEKFISASRRSEHAKRRHGKGTMFQCTHCPSHFVRGHELRKHVDKVHKITADSKKPSKEEAITSDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -