Pxyl007436.1
Basic Information
- Insect
- Plutella xylostella
- Gene Symbol
- -
- Assembly
- GCA_905116875.1
- Location
- CAJHNJ020000052.1:10900543-10907642[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-06 0.0061 16.9 0.0 21 39 4 23 3 27 0.85 2 4 1.7e-12 2.6e-09 37.3 0.4 2 39 39 76 38 79 0.93 3 4 8.8e-17 1.4e-13 51.0 0.2 2 45 94 138 93 138 0.96 4 4 6.8e-16 1e-12 48.2 0.0 4 40 148 185 145 189 0.91
Sequence Information
- Coding Sequence
- ATGTACTTACACGCGTCGACGACATACGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGAGGGCGGGTCGCGCGCGTGGGGCGAGGGCGAGCTGCGCGCCGCGCTGGCCGCCCTGCGCGCCGGCGCCATCTCCGCCAACAAGGCCAGCAAGGCGTACGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCGGACCTGGCGCGCGCGCTCGCCGCCATCCGCGCGGGGCAGGCGTCCGTGCAGCGCGCCTCGGCTATATACGGGATACCTACAGGCACGCTGTACGGTCGCTGCAAACGCGAGGGCATCGAGCTGTCGCGCGCGTCGCCCGCGCCGTGGTCCGAGCGAGCCATGCGCGACGCGCTGGACGCCGTCAGAGTGGGCCAGATGTCCATCAACCAGGCGGCCATCCACTACAACCTGCCCTACTCCTCGCTCTACGGACGCTTCAAGCGGTGCAAGCTGCCGCAGGAGCCGGCGGGGTTCCCGGAGATGGAGCCCTACCACTACGCGCAGCCGCAGGGCGAGCCGGTCTACCCGCCGCCGGACGACGCCGCGCCCGACCCGGCGCTGTTCCACCACGAGCTGCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCAGCGACTCCGTGTACTATACGCAGCACGGCATCCTCACCAGCTGA
- Protein Sequence
- MYLHASTTYGIPSTTLWQRAHRLGIDTPKKEGGSRAWGEGELRAALAALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALAAIRAGQASVQRASAIYGIPTGTLYGRCKREGIELSRASPAPWSERAMRDALDAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKLPQEPAGFPEMEPYHYAQPQGEPVYPPPDDAAPDPALFHHELPAAAAAAAACSDSVYYTQHGILTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -