Basic Information

Gene Symbol
-
Assembly
GCA_905116875.1
Location
CAJHNJ020000483.1:2151068-2166377[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-16 1.7e-12 48.2 0.0 3 89 228 307 226 307 0.90

Sequence Information

Coding Sequence
ATGAGACAAGCGTTGTCTATTCAAATACAGGACGAAGTGCTAGCAATCAATGACAAGGTGGTCTTGAGAGCGGACGACCTGCTGAGCTGGTTATGCGACGGCGGCGACTGGCGCTGGGGGCTGCGGGCCGTGTGGCGCGGGGCCTGCGCGCCCCCGGCCGAGGGGGACGCCACGGCGCCGCTGCACAAGACCAAGATGGACTTCAGTGACGTGGATAAGGAGAAGAGCGCTATACCGGTGGACCCATCCCGCGCCGGCGTGGTGGTCTTCTCCTACGGTCGCTACTGCCGCTACCGCGCGCTACTCTCGCGCCTCGAGGGGCTGCAGGCGGACTGGCTGCGGCAGGCGCTGGTGGCGGCGCTCGGCGGCTACGCGGCGCCCACCAGCAACACCTGCATCCTGTACTGCAAGGACACCTTCGAGTACCCCGAGCTAGAGGGTCACGAGCTGATCTGCAACCAGCTGGCTCCCCGACTGAAGGGCCGCCCGCGCCGCCGCCGCCGCCGCGCGCGCTCTCTCTCGCACTCGAGCGAGAGCGCCGACAGTGGGAGCGAGACGCAGAACCGGTACACGCATACACAGCCATCGAACCAGCGCCGCCCATCCCTCCGCAACGGCAAGCAGGCCACCAGCACTGAAGAAGAAGAAGACATCTCTGTGCCAGCGGACGAGGAGGCCGACAGAGCCTTCCTGAGACAGCTGCGAGCGTTCTACAAGTCGCGCAACGAGTCGTTCAAGAAGGCTGCTAGTTTGAAGGATTTGTCCCTCCGCGCCCTCTACCTATCCGTGCGGCGACGCGGCGGCTACGCGGCCGTGTGCCGGCGCCGCGGCTGGCGCTCCCTGCACGACGCCTTACAGCCGACTGCGCCACACCCGCATCACTTGACCAAGACCTACGAGAGATTCCTGCTATCCTACGAAACACACGAGCGTCGAAACGGCACTAAATACCTCAGCGTGAACGGAAAACCGAAGAAAGACTCCACCCCCATAGACACCATCGACGTGACCGAGTCCCCCCTACGAGAGACCAAGACCAAACCCGACCCCCCACAGGACAAGCGACTGAGAACCCCATCGCCCAAACCAGAAGTGTCCTTCAACTCTGAGACCGGAGAGACAGAAGTCAAAGACTTGAGCAAACCAGCCGAAGAGCTGAACAAAGAATTCCTAGATTCACTGCCTAAAGATGAGAAGAAAGATAAAGACGCTCCGAAAATCAGTGTCAAACCGGTGGAGACGCTTCTAGAGAACAATCTGGCTGAGTATTTTAAAAGTAGCGAAGTGGTCAAGAGTTTGGCGGCTGATAACAGTGCGTTGATAGCTGAACTAGCTAATAAGTATAATTTGAAGGATTCGACCAAGATTTTGGAGGAGATTGCGAATAAGAAGCTTAGTGATGGAAGTAATCTGTTTTTGAACGAGTTGGCTATGAAACTTAATTTGGGTCACCCGGACTCGACGGGCGCCAGCGACCTGTCGCGCCGCGCCGCGCACGCCGCCAGCAACGGACACGCCGACACCGACAACTCAGAGAAGCGGTCGGTGGCTCGCAACGCGCAGCGCAGCTCGCTCCGCTCCGTGCGCGTCAAGCCGGCAAGAGAGGCGCGCGCCTTCAACACTACCACGCCGTCGCTCCGACCGGACTCCGCCTCCTCCTCCCCCCCCGTGTCCAGCTCCACCCCCCGCACCAACTTCGGCATCGCCTACCCCCCGCCCCCCGCGCACGGACACGTCTCCTCCACCAACAGCCACGAAGACGACGACGAAATAGTCGAGGTACCGTACAAGCCCAAAACACCGGAGATCATCGACCTAGACGAATACCCCGAAAGCCCGCAAAGCGTCAAGAAGAAAAAACTTGATATCTTGAAGGAAAGAGGGTTAGAAGTCACAGCTATACCTAGCAATTGGACGCCGGCGGTTGTTCCTAACATGGTCCCGATGTTAAACCCGGCGATGCAGCATCAGTTATTGACCAATCCAATGTTCCAAATGTACAGTATTATGCCTAGTTTCGCTAACGGCGCGCAACCGCCTCCGAAAGTCATACAAGGCATGAGTGTTTTCGGGTCCAGTGGCACGGAGAAGACGGTTTACGGCAATCCGAAAGATCCGTTTATGCCTCCACCGCATATCCTTCAGGGTACTCCTATTAAGCCTCCCAGGGCACCCCCTGTCAGCTCGTCGCCTCAACCCCCGGCTAAAGACATAATGGACTTATCTAAGCCTCAAGGACCATCCCCGCAGAAGCCCGCAGTAGAAATAGTTCGCGTCCCCAACATTCCGTCACCATCTAAGAACGTCCCCCAAAACCTTTCCGCTAAGAACTATACGCTTATTGATGGCAAAGCAGTAGTGGGGTCCAATTTAGAGATTACCCTGGTCAATCCGAAGAGTCAGACGCCAGTTAAGAATAGGCCTCCGCAGAAACGCTCGTCCAATGGCAAGTTTACGTCTGCTAAAACACCGACGCCACCGAAAGAAGGCTACCCTAAAGCGTACGCCTCTCCTTCGCCTTCTGGCGTTCAGAAGGATCGCAAGCCCAACATTATTATACCAAATTACCAGATTAATTCAACTAGAGATGACCCCTCACCTACTGGGTCCACTGGTTCAAGGGACTCTCAGTCTAGTTTACTGCAGAATAATCTTCTAAACGCATATAAGGGGCAGAATAATTTGGCTCAACTTATGGAAATGCAGGCAAAAAGCGCGGTCCCAGCCTTAAGTCCCTTCATGGATCCTATGTACATGTCAGCGTTGTATTCAAGTCTGGCTGGACAGATGGACCAGAGACAAATGGCTCTGTATAGAGACTTTATGGCCAGCCAGGTGCGGGGGTTCCCCGGTCTGCTGAATATGGGCGCTATAGCCAACACGCCGACAACGAAGAATTAA
Protein Sequence
MRQALSIQIQDEVLAINDKVVLRADDLLSWLCDGGDWRWGLRAVWRGACAPPAEGDATAPLHKTKMDFSDVDKEKSAIPVDPSRAGVVVFSYGRYCRYRALLSRLEGLQADWLRQALVAALGGYAAPTSNTCILYCKDTFEYPELEGHELICNQLAPRLKGRPRRRRRRARSLSHSSESADSGSETQNRYTHTQPSNQRRPSLRNGKQATSTEEEEDISVPADEEADRAFLRQLRAFYKSRNESFKKAASLKDLSLRALYLSVRRRGGYAAVCRRRGWRSLHDALQPTAPHPHHLTKTYERFLLSYETHERRNGTKYLSVNGKPKKDSTPIDTIDVTESPLRETKTKPDPPQDKRLRTPSPKPEVSFNSETGETEVKDLSKPAEELNKEFLDSLPKDEKKDKDAPKISVKPVETLLENNLAEYFKSSEVVKSLAADNSALIAELANKYNLKDSTKILEEIANKKLSDGSNLFLNELAMKLNLGHPDSTGASDLSRRAAHAASNGHADTDNSEKRSVARNAQRSSLRSVRVKPAREARAFNTTTPSLRPDSASSSPPVSSSTPRTNFGIAYPPPPAHGHVSSTNSHEDDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTAIPSNWTPAVVPNMVPMLNPAMQHQLLTNPMFQMYSIMPSFANGAQPPPKVIQGMSVFGSSGTEKTVYGNPKDPFMPPPHILQGTPIKPPRAPPVSSSPQPPAKDIMDLSKPQGPSPQKPAVEIVRVPNIPSPSKNVPQNLSAKNYTLIDGKAVVGSNLEITLVNPKSQTPVKNRPPQKRSSNGKFTSAKTPTPPKEGYPKAYASPSPSGVQKDRKPNIIIPNYQINSTRDDPSPTGSTGSRDSQSSLLQNNLLNAYKGQNNLAQLMEMQAKSAVPALSPFMDPMYMSALYSSLAGQMDQRQMALYRDFMASQVRGFPGLLNMGAIANTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-