Basic Information

Insect: Plusia festucae
Gene Symbol: ZEB2
Assembly: GCA_950381575.1
Location: OX494457.1:878977-882466[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 8.2 7e+02 1.7 7.3 2 21 154 173 153 174 0.93

2 10 9.6 8.1e+02 1.5 0.6 1 23 180 202 180 202 0.80

3 10 0.00047 0.04 15.1 1.1 1 23 207 230 207 230 0.96

4 10 0.0019 0.16 13.2 2.4 2 23 236 257 235 257 0.95

5 10 0.27 23 6.4 2.2 2 21 261 280 260 281 0.92

6 10 0.001 0.084 14.1 0.5 2 23 324 346 323 346 0.95

7 10 0.00081 0.069 14.3 1.4 1 23 379 401 379 401 0.98

8 10 0.0041 0.35 12.1 3.6 1 23 407 430 407 430 0.97

9 10 0.01 0.85 10.9 0.6 1 23 439 462 439 462 0.92

10 10 0.0054 0.46 11.7 8.3 1 23 472 494 472 494 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	8.2	7e+02	1.7	7.3	2	21	154	173	153	174	0.93
2	10	9.6	8.1e+02	1.5	0.6	1	23	180	202	180	202	0.80
3	10	0.00047	0.04	15.1	1.1	1	23	207	230	207	230	0.96
4	10	0.0019	0.16	13.2	2.4	2	23	236	257	235	257	0.95
5	10	0.27	23	6.4	2.2	2	21	261	280	260	281	0.92
6	10	0.001	0.084	14.1	0.5	2	23	324	346	323	346	0.95
7	10	0.00081	0.069	14.3	1.4	1	23	379	401	379	401	0.98
8	10	0.0041	0.35	12.1	3.6	1	23	407	430	407	430	0.97
9	10	0.01	0.85	10.9	0.6	1	23	439	462	439	462	0.92
10	10	0.0054	0.46	11.7	8.3	1	23	472	494	472	494	0.98

Sequence Information

Coding Sequence: ATGAGCCGGCAAGTAGATATTAAGGCGTTAGTATCTCATATAGTGCGTGGCGATGGCCCTGATAGATGCCGTATATGTATGGGAGATACGACGGAAGGCCAAGTTCATTTAGACGACACAGTTATGATGGATGGAGACAAGCCTGTGACGCTCGCTGAGTTGCTAGAAATTATCACAGGAGTCGAGGTGCCGCTGGACGAAGACCTGCCGTTAGGCCTGTGCTCCGTATGCTCGGTATCGGCCCTCCAGGCTGCGGACTTCAGGACTCTGTGCCGCCAGGCCGACTCCCAATGGGAGACCACGATCCAACTCCTCAACAGCATACCCATACAACAAacatccaataaaaaaatcatagctaTACTCACGGAAAACTCGATCGCAGTTTCTGAACACGAGGAAAAAGAGATTCCGAAAGTGAAGCGGAGTCGATGCgagaatataaaaaatcataGATGCCAGTGCCCTTGTTGTGGTAAGAAGTTCTTGTATGCGCAACATTTGTGCCAACATTTGAAGGAATCGTCCAACAACCAACATGCGTGTCATATTTGCGCTGAAATTATGACCAGAGAAGAACTGATCACGCATCTCTTGGAAACGCATAACAGAGAACCCTATGCCTGCAAAAAGTGTCCTGCTATGTTCAGATCCTATAAACAGTATAAGATACATTTATCGAAAGCCCACGCGTCTGGAGCCTGTACCTGCGGTGAATGTGGCCGTAACTTTCAAAGCCAACACGCTTACTACGCTCACCTATCAGTGCATGCACCGAAAACGTGTCCAGGCTGCGACGTATTGTTCAGAAACCAAAAATGCTATCACTACCACGTGAAAGAATGCTGTAACCTTGATAAAACACGGTTGGATATACGCAAAACTAAACATAAAGTGACAGTAACAGttaataaaaggaataataagaGTATTAAAGTTGGTATGCGAGGTAGTACTGATTCTGAATGCATTTGTGATTATTGCAACAAGACTTTTGCTGGAAAAAAGTTTGTTGCTGCCCATATACAGATCGTGCACATGAAGAACACTCATAGACCTTGCATTTACTGCGGGAAGCTACTCGCAGCAGCTCACATGACGACCCACGTCAAAAAACACGAGTCAAGGGAATCGTTTAAATGCGGGCATTGTGGCATTACTCTCAAAACGAAACTTGGATATATACAGCATCTACGTCTCCATACGGGAGAAAGACCTTACACTTGTAAATTCTGTGGCGAATCATTCTCAGCGTCTTCTAGACGCTCCGAACATATACGAAAATGTCACAAAGGGTCTGAAATCGTATTGAAGCATGCTTGTGAGTTTTGTCCGGCGAGATTTAGATTGCCGTATCGGCTAAAAAAACATGTGAATGCGGTTCACGGTGAAGGGAAAGAGCAGTTGTTGCAATTTGAATGTAATATCTGCCATCAGAAGTTCAGCAGCTGTCGTGGTCTGCTCCATCATAGTAGGAAGCACCAGGATGATGTTACGCCAGCGCAGATGCCTCCAATAAGTGCTGTTGCAGGAAACGTGGAATAA
Protein Sequence: MSRQVDIKALVSHIVRGDGPDRCRICMGDTTEGQVHLDDTVMMDGDKPVTLAELLEIITGVEVPLDEDLPLGLCSVCSVSALQAADFRTLCRQADSQWETTIQLLNSIPIQQTSNKKIIAILTENSIAVSEHEEKEIPKVKRSRCENIKNHRCQCPCCGKKFLYAQHLCQHLKESSNNQHACHICAEIMTREELITHLLETHNREPYACKKCPAMFRSYKQYKIHLSKAHASGACTCGECGRNFQSQHAYYAHLSVHAPKTCPGCDVLFRNQKCYHYHVKECCNLDKTRLDIRKTKHKVTVTVNKRNNKSIKVGMRGSTDSECICDYCNKTFAGKKFVAAHIQIVHMKNTHRPCIYCGKLLAAAHMTTHVKKHESRESFKCGHCGITLKTKLGYIQHLRLHTGERPYTCKFCGESFSASSRRSEHIRKCHKGSEIVLKHACEFCPARFRLPYRLKKHVNAVHGEGKEQLLQFECNICHQKFSSCRGLLHHSRKHQDDVTPAQMPPISAVAGNVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00185736;
90% Identity: iTF_00185736;
80% Identity: -