Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494452.1:9920786-9931506[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9.8e-05 0.0083 17.2 1.3 1 23 304 327 304 327 0.95

2 9 0.8 68 4.9 7.3 2 23 335 356 334 356 0.96

3 9 0.00063 0.053 14.7 5.1 2 23 388 409 388 409 0.98

4 9 0.016 1.4 10.2 0.2 1 23 413 436 413 436 0.95

5 9 0.15 13 7.2 0.5 2 20 450 468 449 470 0.93

6 9 0.043 3.7 8.9 5.6 3 23 508 529 506 529 0.91

7 9 0.64 54 5.2 0.2 1 23 541 562 541 565 0.77

8 9 1.3e-05 0.0011 20.0 1.2 1 23 568 590 568 590 0.99

9 9 9.9e-05 0.0084 17.2 1.8 3 23 598 619 597 619 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9.8e-05	0.0083	17.2	1.3	1	23	304	327	304	327	0.95
2	9	0.8	68	4.9	7.3	2	23	335	356	334	356	0.96
3	9	0.00063	0.053	14.7	5.1	2	23	388	409	388	409	0.98
4	9	0.016	1.4	10.2	0.2	1	23	413	436	413	436	0.95
5	9	0.15	13	7.2	0.5	2	20	450	468	449	470	0.93
6	9	0.043	3.7	8.9	5.6	3	23	508	529	506	529	0.91
7	9	0.64	54	5.2	0.2	1	23	541	562	541	565	0.77
8	9	1.3e-05	0.0011	20.0	1.2	1	23	568	590	568	590	0.99
9	9	9.9e-05	0.0084	17.2	1.8	3	23	598	619	597	619	0.97

Sequence Information

Coding Sequence: ATGTCCGACCTCAAAATATGTAGAATATGTCTCTCTATCGATGTGAAAATGTATGAATTAGATACGTATCAACTAAGATGTTATTACGAACAGATTATGGCCACAAAAgtTAATGAAAAAGCAGGCCTCCCAAAATATTTCTGCTATCAATGTGCGACCTTATTGCACAAATATCACAAGTTCAAGGAAAAATGCTATATTGGTCAGAAGGTGCTTAAAGAAATACTATGGAAAGGAcctATAACTAAAAGAGCAGTACTCAGCTTAGACAGAAAGAGTCAAAATTTACAAACACCTTTAAACAtaataactgtaaataaaagagttaaaaCCTGCATTATAAAGACCTCCGCCAAATTAAAACTGCATGAGAGAGAGCCAGAAGAAGTAGATGTAGGGTCTCTAAGTGATGACGGTCCCTTCGAAGATGCAATAGAAGACAGCAAAGAACACCTAGAAGAAGTAGAAATAGAAAAGATagaaataaaagaacaaaaggaaaatataatagaaaagattgaaacaaatgaaatagaTGGAATCGAAACAAAACAGTATGAAGAAAAGATAATGGAAATAGAAAAAGTATTCACCGATGATGAATTGCAAAGTGATGATGAAAAGGTATTTGTTGATGATATCAAAATAATGAGTGATGATGATGAGGAATTCGAACCTGAACCGGAACCGGAGCGAAAAGgaactaaaaaaagaaaaacgaggAACAGCGGTAACAGTAAAAAGAAGAAAGCAAAAGAGACTGTTCCTAAAGAAAAGAAATTCGCTGTAAAAACTACGAAAAAGACAGAAATGGATCCGAATAATTGGTTAAAGATTAATTTGACTGAAGAGGAGGCAGATGCAGAGTTCAAAGCTAGAGGGCAGCACAAGAGGTATCTTAACGCACAGTTTAAATGTACTGATTGCCTTAAAGGTTTCTCTAAAGAGGATATGTTGAAAAGGCACGCGAAATTAAGGCATTCTGAGTCCAACGGCCCCATAGAATGTCGGTTCTGCCACATGAGGTTCAAATGGAAGTGCTTCCTCAACAAACATATGAGACAACATTATACTAAATACAAGTGTCTGCGGTGTGATCTCGTCTGTCCATTAGAaacAACAGCTCTGTTTCATGAAGAATATCACAATGGTGTTACGAGGAAATGTGATCATTGTGGCGAAGAATTCAAGCACCTGACGACGTACTACACGCACCTGCGCACGCACCGCAGCGAGCACGTGTGCACGCTCTGCGGCGCATCATTCGTGAGCGTCACCGGCCTCGGAATACACAAGAAGATCAAACATGTTAATGCTGATTCTGAGCTGCCTCAAGGCGAGGAGCAGTACTGCCAGCGCTGTGACGTCAAGTTTGAGACAAGGAAAGCGTATGAAGAACATCTCATACATTCCGCTATGCACGTGGATGGAATTGAAGACTTAGAAATAAATGCACCTATGCCTTCTAACCCCAGGAAACGGCGGCACAACCTGAAGAGGCTTACCCGAATACCTACAGACTGTCATATTTGCGGCAAGCATTTCGCGACGCAGGCGGCGTGTCGCAAGCACCATTTAGCGGAACACCCGCGCACCTCCTTCTTCGCACCCAACGAGAGGCACATCTGCGAGATATGCGGCATGTCACTGGCGCCCGGCAGCGTCTCAAGTCATCTCAATACTCATACTCGAGAGAAGTTGTACACCTGCAACACTTGTGGGAGACAGTTTAACAGCAAAGGTGGCATGACCACACATCAGCTGACACACACCAGTGAAAAGCCGGTGGCTTGCACGCTGTGCGACAAACGGTTCAAACAGGTCAGCAGTATGAAGCTACATTACAGGACCTTCCATTTAAAAGAACCCTATCCTAAAAGGAATCGAAAAAAGAAATCAGATGAGCTGTCAAAGGATGAATATGGACACGAGGATTCTGACGACAATATGACACTTGATAACTTTTACGCGCGTAAATATTAA
Protein Sequence: MSDLKICRICLSIDVKMYELDTYQLRCYYEQIMATKVNEKAGLPKYFCYQCATLLHKYHKFKEKCYIGQKVLKEILWKGPITKRAVLSLDRKSQNLQTPLNIITVNKRVKTCIIKTSAKLKLHEREPEEVDVGSLSDDGPFEDAIEDSKEHLEEVEIEKIEIKEQKENIIEKIETNEIDGIETKQYEEKIMEIEKVFTDDELQSDDEKVFVDDIKIMSDDDEEFEPEPEPERKGTKKRKTRNSGNSKKKKAKETVPKEKKFAVKTTKKTEMDPNNWLKINLTEEEADAEFKARGQHKRYLNAQFKCTDCLKGFSKEDMLKRHAKLRHSESNGPIECRFCHMRFKWKCFLNKHMRQHYTKYKCLRCDLVCPLETTALFHEEYHNGVTRKCDHCGEEFKHLTTYYTHLRTHRSEHVCTLCGASFVSVTGLGIHKKIKHVNADSELPQGEEQYCQRCDVKFETRKAYEEHLIHSAMHVDGIEDLEINAPMPSNPRKRRHNLKRLTRIPTDCHICGKHFATQAACRKHHLAEHPRTSFFAPNERHICEICGMSLAPGSVSSHLNTHTREKLYTCNTCGRQFNSKGGMTTHQLTHTSEKPVACTLCDKRFKQVSSMKLHYRTFHLKEPYPKRNRKKKSDELSKDEYGHEDSDDNMTLDNFYARKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00177608;
90% Identity: iTF_00185688;
80% Identity: -