Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494460.1:1290760-1308184[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0054 0.45 11.8 1.3 1 23 361 383 361 383 0.98

2 11 0.0067 0.57 11.4 9.8 1 23 390 412 390 413 0.94

3 11 0.35 30 6.0 3.2 1 23 417 439 417 439 0.97

4 11 0.096 8.2 7.8 2.0 1 23 444 467 444 467 0.97

5 11 0.0035 0.3 12.3 0.2 1 23 471 494 471 494 0.94

6 11 9.6 8.1e+02 1.5 0.1 3 20 508 525 507 527 0.86

7 11 1.5 1.2e+02 4.1 0.4 2 23 585 607 584 607 0.94

8 11 0.011 0.9 10.8 0.6 2 20 623 641 622 644 0.91

9 11 2.5e-05 0.0021 19.1 1.4 1 23 650 672 650 672 0.99

10 11 1.3e-05 0.0011 20.0 5.3 1 23 679 701 679 701 0.98

11 11 3.6e-05 0.0031 18.6 1.3 1 23 707 730 707 730 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0054	0.45	11.8	1.3	1	23	361	383	361	383	0.98
2	11	0.0067	0.57	11.4	9.8	1	23	390	412	390	413	0.94
3	11	0.35	30	6.0	3.2	1	23	417	439	417	439	0.97
4	11	0.096	8.2	7.8	2.0	1	23	444	467	444	467	0.97
5	11	0.0035	0.3	12.3	0.2	1	23	471	494	471	494	0.94
6	11	9.6	8.1e+02	1.5	0.1	3	20	508	525	507	527	0.86
7	11	1.5	1.2e+02	4.1	0.4	2	23	585	607	584	607	0.94
8	11	0.011	0.9	10.8	0.6	2	20	623	641	622	644	0.91
9	11	2.5e-05	0.0021	19.1	1.4	1	23	650	672	650	672	0.99
10	11	1.3e-05	0.0011	20.0	5.3	1	23	679	701	679	701	0.98
11	11	3.6e-05	0.0031	18.6	1.3	1	23	707	730	707	730	0.95

Sequence Information

Coding Sequence: atgaagtgTGCTGTGCCGAACTGTATGAATGATTCCCGACTTATATACAAGTCAGATGGCATTACCTTTCACCTGTTTCCAAATGAGTCGTCGGTCCGCTCAGCATGGATGAAAGCCCTTGGCAAAGAGAGTTGGGAGCTGAAGGAACGGAGTGTGGTATGCTCGGAGCACTTCCTGGGCGAAGACTTGTATGTGATGAAAAGTGGGCGGCGGAAGATCAGGGCTGGTGCCGTACCAATGGTTGGTTTGCTTCagGAGTCCAGAATGTGCGACGATGGTGATCCTGCTAGCTCAAACGCATGCAGGATATGTTTGGTAATAGGCATGAAATTGATACCAATAAGAACGAATAAGCTGCAGCTGGCGTACGAAAATCTCACCGGAATATTGttaGATGAAGAAGATAAATTGCCCCAGAAGCTATGCGTGGAATGTGCGCAAAGACTAAAGAATTGCTCAAGTTTTAGATACAAGTGTCTGAGAGCGAACTCTCTTATGCTCGAAGCTCTTAAGAGGCAGAACTGTttgactgtccaagatataaaaacaattaatcgCGATAATAATTCCTTATCATCACCCTTATCCATCAAACACTATGAGGTTTACCATTTTAACGACATTTGCCCTCCACCGATGCAAGAATCTTGTGAGATTGAAATCAAACAAGAAATTAACCAAGAAATCAATCAAGAAAATCAAATATTCTTAACTGAAGACGAAGAAGAAAAAAACGATTCGGATAAAATCGAAGAAGCCATTGATGTAGATTCGGATAAAGATACCGAAACATCGgatatagatttaattttatcagaTAAAGATTCTTCAGATGATAGTCTTCCTTTAGAGATATGTAAAACGAAAACGGTTAAACAGCATaaagttaaagaaaagaaaCCTGTTAAAAGATTGAAAAAGATAAAGGAACCGCCTGAACCGAAAATCGATAGACGAAGGAAGCCGTTTTTGAATGATGATTTGAATGAAACTTTGTTTACAATAACTGATTTGACGGTAGAAGAACAAATAGCTGAGATATTGAAAAGGCAGGAGAGTTCTAACTACAAAAATGCTGTGTTCAAATGCACGGAATGTTTTAAAGGGTTTTTGGATGAAGACGCATATAAGAGTCACATGACGAGGCACACTGATCAATGCGGTGAACATGAATGCGAGATATGCAAGACACATTTCAAGCACTCCCACGCTCTTCGCAAGCATATAACAGCTCACCACACTCAGAGGTTCAGCTGTAAGCAGTGTACGTACGTCACAACTCACAGGCAGACAGCCCGGCTGCATGAGAGGTGGCATAAGGGGACCAAGTACAGATGTCCTCATTGTCAAGACGAGTTCGTCAAATTCACGACATACATGGGTCATATACGTATCAAGCACCCCTCCGACTTCGTGTGCGAGCTCTGCGGGTATTCCTTCGTCAGTGCGAAGGGTATTGAGCTTCACAAGAAGCTGAAGCATCGACTGGATGATGCACAGATCCCTGCAGATGGTCCGTTGTGTGAGCTATGCAACGTAAGATTCGTGTCCATAGAAGCTCATAAGCGACACCTCAGCGTTTCAGCTAGACATGGtactgCTACCGAAAAAGGTTCGAGAGAGTCTAACAAGCCTAAAAAGGGGAAGAAGTCGAAAGAGGCAAAAGATCTTGAGAGGAGAGCGAGAGAGAAGGAGCAAGAAGATGACAAGAGAGCGTATCCCAGTCAGATGAGGAAGGCTGAGGGACCCATTCCTTGTGAACAGtGTGGCCTACAATTGGAAGATTCCAGAGCgtaccacggccactttagacGTATGCACCCAGACAAGAATAGAACCAACTACCCGTCCATGAAGTCACCGTGCATGTGCGAGGTGTGCGGCAGGATGTTCCAGagtTATGCCCTCTTAAAGGACCATACATGGGTCCACACTGGCGAGAGGAATTTCAAATGTGATTCCTGTGGAAAATCCTTCAGGATGAAGCAACGTTTAGTAGCTCACAGGCGCGTTCATAGCCAAGAACGAGCGAGCTATGTGTGTACTGTATGCGGGAAACACTTCTCAACACACAGCAATAGGCAGAGACACATGTTTATACACACCGGCCTTAAACCTTTTAAATGTGAGATGTGTGGTAAGGGTTTCAAGCATGCGAGCGAGAAAAGAGCTCATATTACGTATGTGCATCTTAAGAAACCCTGGCCGAAGCGTGCCAGAGGCAAGCGAAGACCGGAGACCAGACAGGGTCAGCTGGGTCCCCAACAGGGCCCCAACAACGATTTGGACATGGCCCCCCACATGTGGCCCCCTATTGATCCCAAACTATCAGACATGAACGTTATAATAGAAGATAAACCGGGATACTACAACCTGaagatttaa
Protein Sequence: MKCAVPNCMNDSRLIYKSDGITFHLFPNESSVRSAWMKALGKESWELKERSVVCSEHFLGEDLYVMKSGRRKIRAGAVPMVGLLQESRMCDDGDPASSNACRICLVIGMKLIPIRTNKLQLAYENLTGILLDEEDKLPQKLCVECAQRLKNCSSFRYKCLRANSLMLEALKRQNCLTVQDIKTINRDNNSLSSPLSIKHYEVYHFNDICPPPMQESCEIEIKQEINQEINQENQIFLTEDEEEKNDSDKIEEAIDVDSDKDTETSDIDLILSDKDSSDDSLPLEICKTKTVKQHKVKEKKPVKRLKKIKEPPEPKIDRRRKPFLNDDLNETLFTITDLTVEEQIAEILKRQESSNYKNAVFKCTECFKGFLDEDAYKSHMTRHTDQCGEHECEICKTHFKHSHALRKHITAHHTQRFSCKQCTYVTTHRQTARLHERWHKGTKYRCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRLDDAQIPADGPLCELCNVRFVSIEAHKRHLSVSARHGTATEKGSRESNKPKKGKKSKEAKDLERRAREKEQEDDKRAYPSQMRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHTWVHTGERNFKCDSCGKSFRMKQRLVAHRRVHSQERASYVCTVCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRARGKRRPETRQGQLGPQQGPNNDLDMAPHMWPPIDPKLSDMNVIIEDKPGYYNLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01221657;
90% Identity: iTF_01221657;
80% Identity: iTF_01221657;