Basic Information

Insect: Plusia festucae
Gene Symbol: BCL11A
Assembly: GCA_950381575.1
Location: OX494445.1:4383234-4385126[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3e-05 0.0025 18.8 3.3 1 23 259 281 259 281 0.97

2 5 2.7e-07 2.3e-05 25.3 0.8 1 23 287 309 287 309 0.99

3 5 6.7e-07 5.7e-05 24.0 3.2 2 23 527 548 526 548 0.97

4 5 8.8e-06 0.00074 20.5 3.3 1 23 554 576 554 576 0.99

5 5 5.7e-05 0.0048 18.0 0.4 1 22 584 605 584 605 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3e-05	0.0025	18.8	3.3	1	23	259	281	259	281	0.97
2	5	2.7e-07	2.3e-05	25.3	0.8	1	23	287	309	287	309	0.99
3	5	6.7e-07	5.7e-05	24.0	3.2	2	23	527	548	526	548	0.97
4	5	8.8e-06	0.00074	20.5	3.3	1	23	554	576	554	576	0.99
5	5	5.7e-05	0.0048	18.0	0.4	1	22	584	605	584	605	0.97

Sequence Information

Coding Sequence: ATGCCACAACAGCAACCTAACAAACAAAACCACTCGTCGTCAAGCACTTCTTCGTCAAGCTCGGGCTGCTCATCCACTGGCGCACCATTGCCGCCACCCAGCTTACGTCATCACCCATTACTTCCACCTCCAGACATGCATTCACCGTTTGGAGTAGGTGGTCTTCTAAGGATGCCATTACCAGGCAGCTTACCGCCACTGGCACATCCATCAGTTCCTCCTACACCATTGTTTGCACGGCCTAACCACCATGACCACCGGTTTAGGATGGAGCAGCTGGTATCAGAGCAGTTCCGTCACCATGGCCTAAACTTAGCAGCCGCGGCTGCTGCTGTAGCGGCAAACTCCTTGCCACCACACCAAGCATTCCCTTCACCGGCAGACCGACCACCAGTCGTGCCAACGTCAATATCGGGCCGAGATAGAGCCCCACCAGTATCTCAGCCCCTCTCACTTGAACCCCAGCTGGATTTTTACTCGCAGCGCTTGCGGCAACTGGCCGGTACGACCAGTCCAGGGGCGGCCACAGGCAATTCCAGCTCTCCTAGCCCCAGGAAGCATTCTCCTCCGTTCGCTTCCCCGTCGCCCTCCCGAGTCGGCCAGACTCCACCGGCGGGCGCCGGACCCGGAACGGTGGAAACGCCTCGCGAAGCTACGAGGCCGCACAGTTCGACTTCACCAGAACGACGCATTGAACCACTCGCTGCTGATGCGCCGCCCTCAGAACGGCCCTCATCCACGCCACCCGCTAAACGCAACTCTGAAGAATCTATCCATTCATGCGAGTTTTGCGGCAAAAAattccgatttgaaaataactTGATTGTTCATCGCCGATCTCACACTGGCGAAAAACCTTTTAAATGCACCGAATGCGATGAAGCGTTTGAAAAAGCATCAAAATTAAAACGACACATGAAAATTCATCGAACATCTGAAACCAATGTCGAAGATGGGGAATCTGGTGGCGATACAGGAGAGGATGATTCCGATGATGACTTGGAGGACGAGGAATTGGAAGGTGAGGAGGAGGATGAGAATGAGGACGTAGATGACGTTGAGGAGGCAGAAGATTTAACCGTCTCTAATAGTAGCGCCCCTTCTGCACCAACTAGGAAACAAACACCAGTTTTACCTAACAATCCGCCTACTGCATCAGTTGTTGGCGAGTTGATGGACAAATTCGGTCTTTCTAATATTGCTCAATATAGCGAAGCTTTCAAACAGGCTTTGCAAGAATCTGGAAATTCTTTAAAATGGCAACTAGCTAAAGATAGAGACAATAATAATGGCCCACCCAGTGACAAGCCGAATGGTATGCCACCAACGGCTGCCTTACGTTTAAAAGAAGAATTCGCCAAAATGCCACCCCAACCGCATCCTCTGTTCAACCCTTTTGAGAACCCTTTCGAAACCTCTAAACGTATAAAATTGGATATGGATCGAGGGGAAGGTTGGTGGCTACCAACGTTACACGCTCAGCGGCCGCCCGAGAACATCTTCGACGGCTTAAAAAATAGCGGTAATGGCCTTTTGCAGAACCCTCTGCTCAAGTCAAAAGATGGACGACGAAACGATACCTGCGAATTCTGCGGGAAAGTTTTCAAAAACTGCTCAAACTTAACGGTTCACCGGCGATCACACACCGGAGAGAAGCCATACAAATGTGAGTTGTGCTCGTACGCTTGCGCACAGAGCTCCAAGCTTACGAGGCATATGAAGACGCACGGGCGACTGGGCAAGGACGTCTACCGGTGCAGGTTCTGCGAGATGCCCTTCTCCGTGCCGTCGACGCTAGAGAAGCATATGCGAAAGTGTGTTGTTAATCAAAGTAATGGTGCTCCCTTAGCTCTATCCGATGACTCTAACGCGTGCCGTGACGAGGCGTCGTGA
Protein Sequence: MPQQQPNKQNHSSSSTSSSSSGCSSTGAPLPPPSLRHHPLLPPPDMHSPFGVGGLLRMPLPGSLPPLAHPSVPPTPLFARPNHHDHRFRMEQLVSEQFRHHGLNLAAAAAAVAANSLPPHQAFPSPADRPPVVPTSISGRDRAPPVSQPLSLEPQLDFYSQRLRQLAGTTSPGAATGNSSSPSPRKHSPPFASPSPSRVGQTPPAGAGPGTVETPREATRPHSSTSPERRIEPLAADAPPSERPSSTPPAKRNSEESIHSCEFCGKKFRFENNLIVHRRSHTGEKPFKCTECDEAFEKASKLKRHMKIHRTSETNVEDGESGGDTGEDDSDDDLEDEELEGEEEDENEDVDDVEEAEDLTVSNSSAPSAPTRKQTPVLPNNPPTASVVGELMDKFGLSNIAQYSEAFKQALQESGNSLKWQLAKDRDNNNGPPSDKPNGMPPTAALRLKEEFAKMPPQPHPLFNPFENPFETSKRIKLDMDRGEGWWLPTLHAQRPPENIFDGLKNSGNGLLQNPLLKSKDGRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQSNGAPLALSDDSNACRDEAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00040232;
90% Identity: iTF_01093477;
80% Identity: -