Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494440.1:13473342-13477863[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.016 1.4 10.2 0.3 3 23 35 55 33 55 0.93

2 15 0.00065 0.055 14.6 3.7 1 23 93 116 93 116 0.97

3 15 0.00037 0.031 15.4 3.9 1 23 118 140 118 140 0.98

4 15 4.5 3.8e+02 2.5 1.1 1 7 149 155 149 171 0.88

5 15 0.16 13 7.1 0.1 1 23 176 198 176 198 0.94

6 15 0.2 17 6.8 0.6 3 23 227 248 226 248 0.92

7 15 0.66 56 5.2 5.6 1 19 255 273 255 277 0.80

8 15 8.8e-06 0.00074 20.5 0.2 1 23 283 306 283 306 0.92

9 15 0.00011 0.0094 17.0 0.1 1 23 315 338 315 338 0.97

10 15 0.019 1.6 10.0 1.7 2 23 344 367 343 367 0.92

11 15 0.34 29 6.1 1.4 3 23 375 395 375 395 0.97

12 15 0.28 24 6.3 0.8 1 19 400 418 400 422 0.86

13 15 0.0006 0.051 14.7 1.9 1 23 428 450 428 450 0.97

14 15 0.00013 0.011 16.8 3.0 1 23 456 478 456 478 0.97

15 15 0.00044 0.037 15.2 4.7 1 23 484 507 484 507 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.016	1.4	10.2	0.3	3	23	35	55	33	55	0.93
2	15	0.00065	0.055	14.6	3.7	1	23	93	116	93	116	0.97
3	15	0.00037	0.031	15.4	3.9	1	23	118	140	118	140	0.98
4	15	4.5	3.8e+02	2.5	1.1	1	7	149	155	149	171	0.88
5	15	0.16	13	7.1	0.1	1	23	176	198	176	198	0.94
6	15	0.2	17	6.8	0.6	3	23	227	248	226	248	0.92
7	15	0.66	56	5.2	5.6	1	19	255	273	255	277	0.80
8	15	8.8e-06	0.00074	20.5	0.2	1	23	283	306	283	306	0.92
9	15	0.00011	0.0094	17.0	0.1	1	23	315	338	315	338	0.97
10	15	0.019	1.6	10.0	1.7	2	23	344	367	343	367	0.92
11	15	0.34	29	6.1	1.4	3	23	375	395	375	395	0.97
12	15	0.28	24	6.3	0.8	1	19	400	418	400	422	0.86
13	15	0.0006	0.051	14.7	1.9	1	23	428	450	428	450	0.97
14	15	0.00013	0.011	16.8	3.0	1	23	456	478	456	478	0.97
15	15	0.00044	0.037	15.2	4.7	1	23	484	507	484	507	0.98

Sequence Information

Coding Sequence: ATGGCTTCCCCGAGCCAGTCGGAGCCGGCGGTCTGGCTGGAGCAGATCGAGAGCGTGCTGGGCCGCAAGCTGACCTCTATAGAGGTCGTGGGCGGCATATTCTGCAGCATATGCCAGTTGACATTTCCTAACAAAAAGGAATACGACACGCACTACGCAGACCATGGCGTGCGCAACTCGGAGATCAGCTACACCTGTCTAGTGTGCCGCAAAGAGTTCCAAGGCTACCCCAGATTCCGCAACCATTGCTACTTGGCTCATGTTGCTAAGAACAAACACAAATGTGAACATTGCTCCAAATCATATTCAAAACAATCAATTTTGACCAGTCATATTGAGACTGCACACACATTTAAATGTGCATCTTGCAAAAAACAgtTTTCATCTAAAAAAGAACTGCACACACATCAGATCATTCAcaaaaacgaaaaagaaaagCCGCCGTACCAGTGCCATGAGTGCGGGGACTCTATTGAGAGCATCGACATGTGTGAGTATCACATTGACGAGCACTGCTCCAGCCTGTACACATGCCCTGTGTGCAGTGAGACGGCCAACAACAAGCTGGATGCAGCTAAACATCTCACGGAACACTTCGGGGAAGCTCTCACACCTGAAGACATCACTGCTCCAAAGCTCAGTGAGGACTGCTCCATTGACATCCTTGGCGGAGTCCTCTGCAACTACTGTGACGAACTCTTCAAGAACAGACTGGAGTTTGACACGCACTTCTCCATAGAACATGAGGATAAGGAACTGGTTTACTCATGCAACATTTGTGGGAAACAGTACAACAAGTATCATTTGTTTGGCAACCACTGCTACTATCACATCGCTAAAGACAGATTTGAATGCACGGACTGCGGCAAGACGTTCCCGCGGCTGTCGCTGCTGGTGCTGCACACGGAGGCGTTCCACTCGCTGGGCAGCGAGGCCAAGCCCTTCAGCTGCGGCGACTGCGGCTACGGCTTCAAGTCCGCGCGCCGCCTCACCGAGCACGCGCGCGTCGTGCACGACACGTCCGCCATGCGCTGCCGACACCGAGGCTGCGAACGCACGTTCGAGTCCCTGCGGGAGCTGGTCCTGCACCAGCGCGAGCACGGCAGCGCGCGCGACAACTGGTGCCGGCAGTGCGGGCTGCAGTTCAGCTCGCTGGCGTCGTGCGAGCGCCACCTGGACGTGCACCGCAAGAAGCGCTACGCCTGCCCCGTGTGCCAGCGCGTGTACCACGAGAAGCACCTCATCCTCAAGCACGTGCCCTCGCACTTCGAGGCCGTGCTGCACGTGTGCAAGGTGTGCGGCAAGGTGTACAACCTGCGCTCCCGCCTCGTGCAGCACTCCAAGACGCACTCCGACCTGCGCTCGCACGTCTGCTCCTTCTGCAACAAGGGCTTCATGAAGGCCTCGCACCTGGAGCAGCACCTCAACATCCACACCGGCACCAAGCCCTACAAGTGCACCGTCTGTCCCAAGTCCTTCGCCAGCCACCCCAACTGCTACAAGCACATGCGCAGAGTTCATAATGAAGATAAACTAACCAATAAAAACGCAAAAGACGACAAAACCAATAAAACGATCGCCCCTATAGTAGCGGCTCCTGTTACTAACATGGATACTAACGAAAGTAAAAAAGTCGAATCGGGAATCGATTCTACGAGTTCGGAAATGTCTTTGGAGACATACAGCTTCGCAGAGTCGGATGACAGCACCATGGACAGTATTGATCCggcaatttttgaaaaagaatgGTGCATTTTTAACGAAAACTCTCTAATAGACCATAGTCTACAATACACAGATCTGCTGCCAGTTAACAGTACTACATTTGATTCAGCGGGGTCGCTGGAGGCGGCGGGGCCGAGCTCGGCGCTGGGCGGGGCCGAGCCGGCGCGCGAGTACGGGCCGGAGTGCTCGGCGCTGGGCTGGGCCGAGCCCGACGCGCGCGAGCTGGCGCACATCGACCCGCGCCTCACCGTGCGCGCGCCGCCCGGCACGCTGCTCTACTCGCTGCTGCACGCCGACATCTACTGA
Protein Sequence: MASPSQSEPAVWLEQIESVLGRKLTSIEVVGGIFCSICQLTFPNKKEYDTHYADHGVRNSEISYTCLVCRKEFQGYPRFRNHCYLAHVAKNKHKCEHCSKSYSKQSILTSHIETAHTFKCASCKKQFSSKKELHTHQIIHKNEKEKPPYQCHECGDSIESIDMCEYHIDEHCSSLYTCPVCSETANNKLDAAKHLTEHFGEALTPEDITAPKLSEDCSIDILGGVLCNYCDELFKNRLEFDTHFSIEHEDKELVYSCNICGKQYNKYHLFGNHCYYHIAKDRFECTDCGKTFPRLSLLVLHTEAFHSLGSEAKPFSCGDCGYGFKSARRLTEHARVVHDTSAMRCRHRGCERTFESLRELVLHQREHGSARDNWCRQCGLQFSSLASCERHLDVHRKKRYACPVCQRVYHEKHLILKHVPSHFEAVLHVCKVCGKVYNLRSRLVQHSKTHSDLRSHVCSFCNKGFMKASHLEQHLNIHTGTKPYKCTVCPKSFASHPNCYKHMRRVHNEDKLTNKNAKDDKTNKTIAPIVAAPVTNMDTNESKKVESGIDSTSSEMSLETYSFAESDDSTMDSIDPAIFEKEWCIFNENSLIDHSLQYTDLLPVNSTTFDSAGSLEAAGPSSALGGAEPAREYGPECSALGWAEPDARELAHIDPRLTVRAPPGTLLYSLLHADIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00185574; iTF_00186562;
90% Identity: -
80% Identity: -