Pfes023838.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- Zfy2
- Assembly
- GCA_950381575.1
- Location
- OX494456.1:8906041-8923359[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.039 3.3 9.1 1.1 1 23 170 192 170 192 0.97 2 12 0.25 21 6.5 4.0 1 23 199 221 199 221 0.97 3 12 0.48 41 5.6 1.0 1 15 225 239 225 248 0.82 4 12 2.3e-06 0.0002 22.3 3.7 1 23 253 275 253 276 0.95 5 12 0.005 0.42 11.8 0.9 2 23 283 304 282 304 0.97 6 12 1.2e-05 0.001 20.1 0.5 2 23 318 339 317 339 0.97 7 12 0.036 3 9.2 1.5 3 23 346 367 345 367 0.95 8 12 0.09 7.6 7.9 1.3 2 23 378 400 377 400 0.96 9 12 0.016 1.4 10.2 0.7 1 23 407 430 407 430 0.94 10 12 0.0014 0.12 13.6 0.0 6 23 443 461 442 461 0.96 11 12 3e-05 0.0026 18.8 1.2 1 23 470 492 470 492 0.97 12 12 0.00072 0.061 14.5 0.3 1 23 497 520 497 520 0.97
Sequence Information
- Coding Sequence
- ATGGAGGAGTCAGTGACTGTTGAAATAACTGTGAAAGCTGAACCACTAGACTATGAAGACAGTGAGCAACACAATGATGATGGAAATGACAAATCTCCGAATCTTACGCACGAAGAGATTTGGATCAAACCGGAGAAACAAGATGATGAAACTGAAGAATCTCAGCCGGATGATGGGAAAATAACTATAAAGATTGAAAGCAAGGAGTCTGGAGAATCATCCCAGAGCTGCAATGatgataaaaataaatcctggTTGCCACTTAAGAAGAGACTTGATAAGGAGGTTAAGAGTGATGGGGATGGGGATGGGGAGATCAAACAGGAATCAGGAGAGAAGGAGACCGAGGAGGATGGGAAACAGCCTGCAGAGCAGCCGCCAAAGagtaTGGAGACCCCCGTGATGTACTCGTATGATATCACAAAGAACATCGAGATCGTGACCATCAGTGAGGAGGAGCGACAGCTGGAGTACGAGGAGACGAAGAAGTCGCGCCAGCATATGCGGCACGTATGCGAGCATTGCGCGCTCGGCTTCGTGCTCAAACAAGCATACCTCATGCACATGAAAGTGCATTCTCCTGAGTCAGGCGAGCACGAGTGCGTGCTGTGCCACACGCGCATGAAGACGGCGGACATGCTGTACCGGCACCGGCTGCGCCACTACCGCCGCTACCGCTGCCTGCTGTGCTGGACCCGGTTCAAGGACAAGGACACGGCCGCCTGCCACGTCATGAACGACCACGCGCAGCAGACCTTCGAGTGCGAGCATTGTGGGAAAGGGTTTAAGCGTCCTCAGTACCTGAAGCGGCACGTGGAGCAGCACCACACCAAGCCGCTCAACCTCGAGTGCAGCGTCTGTCTGCGGGTGTTCCACGAGAGGGGTTGGTATAGGACCCACATCAGGTCACATAACGAGGAAATACGAGCCATGACAGTGAAGGTCCCAGTGTCCTGCGCTATCTGCTCCCGAGAGTTCAAGACTAAGGAGGGCCTGAAGAGGCACCTCCTCACGCATGAGAACGAGGATGTGGCTTGCGACCTGTGCGGCGTGAAGTGTAAAAATAGGAACACTTTAGCGCAGCATTTCTTGAAGGTGCACAATGAGAAATATGAAGgCGCACCGGAGCAGACGTGTCCCGAGTGTATGAGGGTGTGCGCGACGCGAGTCATACTCAAACGACACATAAAACGCATGCACAGCGATAGAACTAAAAAATACCAGTGCGACCACTGCCAACGCATGTACTTAACGAAGGCGGAGGTTCGGTCGCACATCGCGTGGTCGCACCTGTCGGGCGAGGCTCGCGGCGGGCACGCGTGCGCGTGCGGGCGCGTGTTCCGCTCGCCCTCGCTGCTGCGCGACCACACTGCGCGTGCGCACGccgcgctgccgccgccgcgcctGCACCAGTGCGACATCTGCGAGAAGGCTTTCGCGAACAAACAAGTGTTGAACCGCCACAGGAAGGGGCACTCCAACGAAATGTACCCCTGCAACGAGTGTGGACTTCTCTTCAAAACACAGCCATACGTCAAAGTCCACTACCAAATCAAACACTTAAACATGACAAGAGCAGAAATTAAAGAACAGAGAAAACTCAACAAGAATAAGATACCTCAGAATAATATACATAAGAGCGTCAGTCCAGAGCCTTTGGTACCTATTCCAAGTTCTGAAGACCAGTTGAAGGACCCTTTGATGATGGAAGTTGAGGTTAAGTTGGAGACCGAAGATCAGCTGGCTTCCGACAGTGTAGAAACAGAATAG
- Protein Sequence
- MEESVTVEITVKAEPLDYEDSEQHNDDGNDKSPNLTHEEIWIKPEKQDDETEESQPDDGKITIKIESKESGESSQSCNDDKNKSWLPLKKRLDKEVKSDGDGDGEIKQESGEKETEEDGKQPAEQPPKSMETPVMYSYDITKNIEIVTISEEERQLEYEETKKSRQHMRHVCEHCALGFVLKQAYLMHMKVHSPESGEHECVLCHTRMKTADMLYRHRLRHYRRYRCLLCWTRFKDKDTAACHVMNDHAQQTFECEHCGKGFKRPQYLKRHVEQHHTKPLNLECSVCLRVFHERGWYRTHIRSHNEEIRAMTVKVPVSCAICSREFKTKEGLKRHLLTHENEDVACDLCGVKCKNRNTLAQHFLKVHNEKYEGAPEQTCPECMRVCATRVILKRHIKRMHSDRTKKYQCDHCQRMYLTKAEVRSHIAWSHLSGEARGGHACACGRVFRSPSLLRDHTARAHAALPPPRLHQCDICEKAFANKQVLNRHRKGHSNEMYPCNECGLLFKTQPYVKVHYQIKHLNMTRAEIKEQRKLNKNKIPQNNIHKSVSPEPLVPIPSSEDQLKDPLMMEVEVKLETEDQLASDSVETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01488041;
- 90% Identity
- iTF_00186569;
- 80% Identity
- -