Pfes023914.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- ZNF296_1
- Assembly
- GCA_950381575.1
- Location
- OX494457.1:99253-111136[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.23 19 6.6 0.2 3 23 111 131 109 131 0.96 2 15 0.011 0.97 10.7 2.4 1 23 260 282 260 282 0.98 3 15 0.0012 0.098 13.8 0.4 1 19 288 306 288 311 0.90 4 15 0.069 5.8 8.3 3.3 1 23 316 338 316 339 0.95 5 15 6e-06 0.00051 21.0 1.0 2 23 530 551 530 551 0.98 6 15 0.00013 0.011 16.8 3.6 1 23 557 579 557 579 0.98 7 15 0.49 42 5.6 5.4 1 23 643 665 636 665 0.97 8 15 0.28 24 6.4 0.1 2 23 673 694 672 694 0.96 9 15 0.0038 0.32 12.2 1.3 1 23 700 722 700 722 0.95 10 15 0.00031 0.026 15.7 0.9 1 23 728 750 728 750 0.98 11 15 1 88 4.6 6.1 1 23 758 780 758 780 0.98 12 15 0.044 3.7 8.9 3.7 2 23 820 841 820 841 0.96 13 15 0.026 2.2 9.6 4.7 1 23 858 880 858 880 0.95 14 15 1.7e-06 0.00014 22.8 0.7 1 23 886 908 886 908 0.98 15 15 2e-05 0.0017 19.4 5.3 1 23 914 937 914 937 0.98
Sequence Information
- Coding Sequence
- ATGAACCAGACAACTCTACCAGTTAACATGGACATAGATCCTCTAAGCTACGAGTACCCTGCGTATGACTACCCACTCAACCCTGCACCATACTCATACCAAGTCAAAGAGGAAACAATGTACTACCAACAGAACTGCGTACCAAACAGTCACACGGAATACAAAATAACACCGTTACAAACTAAAGAAGAAACTAAAATAgaagtaaaagatagcaataaagataaaaaagataGCAAAACAGTACCcacaagaagaaaaaaagataaAGGGCAGAAAAGTACTTATTGTTCAGAAAAGATAACGGATGCAAGCTTCCCGTTCTACGGTTGTTCCGTCTGTAATATAAGTTACACAGCTCTCCATGAGTTAGATCAACATGTTACTATACATAAGAATAGGATGACAAGCTATAGATTAAGATTAAGGAAccaatataaaaagaaacaattaaaaaaggaaaagaaaagattaaaaaagataataaagaaagaaagcaaTGTAGATATAGAAATTAAGCCGGAGGATGGGTATATAGGTAATGAGAAAGCTACAGACTTTTTAAATAACGGAGAGAACTCTGAAAATCATGAGGATCAGAAAAAGAGTGAAAATCCTAACAATACAATTACTACtttatataatgttaataattctATTAGTAATGGGAATGATCAATCTATAAGTAACGGTAACGGTGTGAACAATGAGAATAGTGAAAGTAACGGCAAGATCAGTAAAGAAGaggaaaatgaattaaataatttagagAAAATTTACAAATGTTTTGCTTGTTTGAAGCAGTTTACGTTGAGTTATTATTTGAAGCTTCATGTGCGGTCACATACAGATGAGAAACCTTACAAATGCAACGCCTGCGGGCAGTCCTTTATAACGGCGAGCAAACTCGGGAGGCATGACAAGCGTATACACCAGACCGCGCGCTTCCAGTGCAGGATATGTTTCAAAGTGTTCTTAAGGTTCGACCTGCTGACGGCTCACTTTGATAAGCACCATCCTGAAGACAAACTGGAAGGAGAGCCTTACGACTACAACGCCATCCTCCCCTACCTAAAGGAGTTAGAGGAGCAGCTCGCCCAGCAAGCGGAGGAGAAGCCCAAAGTGGAGGATTTGTGGGGAGATGTCCCCTGTACCCCGCAGCAGGTGACCTTGTGCGAGGACACCGGGGAGGTGAAGGTTGAAAGCTGGAGCGACGGCCACTGTGTTGTACTTACTGATGAGGTCAAAGAGGAGACACCAGATGAGGACAAAAAAGACGTTATACCTAAACAGGTCATAGAGGTTAAAGTTGACTTCGAAGACTTCAAGGTGAAGCAGGAAGTGTCGGATGACGACGGAGGAGATGCGGGGTTCGCGGGGGAAGATGCGGGGATCGCGGGGGAAGATGCGGGGATGGAGCCCCCCGGGGACAGCGACGACAGGGTCAAGGCCGAGGATAGCGCCTCAGACGAGGACTACTTCCCGTCCAACACGTGGGCGGTCCCCCCGGCCCCCCCGCCCGCGTCCCCGCTCCCCTCCCCCCGGCGGAGGCGCGGGGAGGCGGGAGGAGGAGCGGGGAAGGGAGGGGAGTGCCCCGTATGCCACAAGACTGTCAGCAGCGCGTCGTACATGAGAGTGCATATGCGGACGCATACCGGGGAGAGACCGTTCAAGTGTTATAAGTGTGGTAGGGGATTTATAACAAGCAGCAAGATGCACCGGCACGTGTTGACGCATGAGGACAAGGACGGCGAAATTAAGACAGAAGACGGGGCGGAGGGTGAGAAGAAAGTGGAGGGGGAGGGGGGAGAGGATATTGACGAAGACGATCTACCTCTTAAGCCTAGCAAAACTAAGAAGAAAGGCAAGACGAAAGAGAAGAGCAACGGAGAAGAGAAGCCGAGGAGGAAGCATCAGAAGCGGCCGCACGCCTGCGAGTACTGCAACCAGAAATTCCTCCACCTGAACATGCTAGAGGTGCACCGTAAGAGCCACGCGGGCGAGCCGCTAGTGCTGCGCTGCCACTACTGCCTGCTAGAGGTGCCCGACCAGCCAGCTCTAACAGAACACGAGGCCACTCACAATGGACCCAAGCCGTATCTCTGCACGATTTGCGGCAAGGGATATAAGAAGAGAGAGACTATGGTGTACCACCGCAAGCAGCACAAGTCGGAGGCGTCGTTCGTGTGCGACGTGTGCTCGCGCTGCTTCCCGGCGGCGCGCAAGCTGGCGCAGCACCAGCGCTCGCACCGCGCGCGCGTGCTGCGGAGATACGAGTGCCCCGTCTGCGCGCACCTGTTCCACACCAAGTACCACGTGCACATGCACCTCGCCACGCACCAGAAGGAGGGCCTCATCCAGGAGCAGCATCGCGGGCAGGTGCTGGCGATGGCGCTGCAGAACGCGCGCCCGCTGCCCGCGCGACCTCGCGCGACTGCTGCCGACGAGCGCTCGCGCGTCTGCAACATCTGCGGCGAGCTGTTTCACCACTTCTTCCACCTGGAGGAACACCTCAAGGGCCACGCGGCCAGCATCGCCGTCGAGGAGTTAGATAAGCCAGCTGATAAGAAGCACATCTGTCCTCTCTGCAACAAGGGCTTCAAGCTCCACTACTACCTCAAACTGCACAGCTTCACGCACTCTAAGGAGAAGCCGTTCATCTGCCAGCAATGCGGAAAAGGCTTCATCACCAAGGGGAAACTGAAGCGCCACTTGGAGACTCACTCGGGCCTCAAGAAGTACCAGTGCCACATCTGCTGCAAGTTCTTCACGCGGCCGAGCTACCTGCGTATCCACATCCGCACCATCCACGGCACCCAGGACTACAACTTCCGACTCCAGCTGAGGCAATAG
- Protein Sequence
- MNQTTLPVNMDIDPLSYEYPAYDYPLNPAPYSYQVKEETMYYQQNCVPNSHTEYKITPLQTKEETKIEVKDSNKDKKDSKTVPTRRKKDKGQKSTYCSEKITDASFPFYGCSVCNISYTALHELDQHVTIHKNRMTSYRLRLRNQYKKKQLKKEKKRLKKIIKKESNVDIEIKPEDGYIGNEKATDFLNNGENSENHEDQKKSENPNNTITTLYNVNNSISNGNDQSISNGNGVNNENSESNGKISKEEENELNNLEKIYKCFACLKQFTLSYYLKLHVRSHTDEKPYKCNACGQSFITASKLGRHDKRIHQTARFQCRICFKVFLRFDLLTAHFDKHHPEDKLEGEPYDYNAILPYLKELEEQLAQQAEEKPKVEDLWGDVPCTPQQVTLCEDTGEVKVESWSDGHCVVLTDEVKEETPDEDKKDVIPKQVIEVKVDFEDFKVKQEVSDDDGGDAGFAGEDAGIAGEDAGMEPPGDSDDRVKAEDSASDEDYFPSNTWAVPPAPPPASPLPSPRRRRGEAGGGAGKGGECPVCHKTVSSASYMRVHMRTHTGERPFKCYKCGRGFITSSKMHRHVLTHEDKDGEIKTEDGAEGEKKVEGEGGEDIDEDDLPLKPSKTKKKGKTKEKSNGEEKPRRKHQKRPHACEYCNQKFLHLNMLEVHRKSHAGEPLVLRCHYCLLEVPDQPALTEHEATHNGPKPYLCTICGKGYKKRETMVYHRKQHKSEASFVCDVCSRCFPAARKLAQHQRSHRARVLRRYECPVCAHLFHTKYHVHMHLATHQKEGLIQEQHRGQVLAMALQNARPLPARPRATAADERSRVCNICGELFHHFFHLEEHLKGHAASIAVEELDKPADKKHICPLCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHSGLKKYQCHICCKFFTRPSYLRIHIRTIHGTQDYNFRLQLRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -