Pfes026403.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- Znf711
- Assembly
- GCA_950381575.1
- Location
- OX494460.1:5979720-5994172[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00067 0.057 14.6 8.4 1 23 273 295 273 295 0.98 2 11 0.47 40 5.6 0.6 1 23 302 324 302 324 0.96 3 11 1.9 1.6e+02 3.7 0.3 1 23 328 351 328 351 0.94 4 11 0.014 1.2 10.4 4.6 1 23 358 380 358 381 0.96 5 11 7.6e-07 6.5e-05 23.9 0.8 2 23 387 408 387 408 0.98 6 11 0.00014 0.012 16.7 4.0 1 23 414 436 414 436 0.98 7 11 0.00067 0.056 14.6 1.8 1 21 442 462 442 467 0.93 8 11 0.00017 0.014 16.5 0.1 1 23 475 498 475 498 0.97 9 11 1.3 1.1e+02 4.3 0.0 1 22 504 525 504 527 0.86 10 11 7.3e-06 0.00062 20.8 1.0 1 23 536 558 536 558 0.98 11 11 5e-06 0.00042 21.3 0.8 1 23 564 587 564 587 0.96
Sequence Information
- Coding Sequence
- atggAGACAATGAGTTTAGGTAACGAAGACGAGTTAAAATATGATCCGGAACTTGTGAGTTCTATTTGTCGGTGCTGTTTAAGTACGGAAAGGTTAATGTACGACGCTTGTAATTTCGAAGTGTTATTCAAGGACCTAACAGGGATATCTGTATTACAGTCTGATGGTCTGCCGCAgtggttgtgttacgagtgtgccTCATTAATGCGGAAAGCAGTTAGAttcaaacaaaaagtattaCGAGCACATACCGTTTTGTATGAGTATCTGACTCGGTGTGCACCGTTTCCATTGGACGCTCAGGATGAGGAGCTATCCAAATACTCCAGCCCTTACCTGGCAGCTACGAAGACATTACACCTGGATATCACTGGTAAAGGCCGAAGCGGTGTCTACAAAGTGTTACAGCATGAGAAGAAGACTCAAATGTCAGAGTTGGATGATGTTGCAATACCCTTCCTAggtaaagaagaaaataatgtcaAAGAAGAAATGGGGTTCTCTGACTACGAAGATAATATTACTTTGGAAGAATTCAGATTAGAGGCTAATAAAATAACGGAAGATGATTTAGCCTCTATACTCCAAGAAACGAAAGTTGaagtaaaaaaagaagaagttaaaaagaaaaagaaaattaaaaagaaacaattaaaaaatgtaaatgaatccGAAGATGAAAATgaagtgaaaaataaatcttcaaTTCGGAAAACTATAGAATTGGATCCAAATAAGATTAGGATTGTGAATCTTAACCCTGaagaacaaataaaacagagagaggagGAGAGTAAGGCGGGCTTGAGGTTTCCTCACCAGTGCCATCTATGTCATAAAGGATTCAATTTTGAGTCTAAATTGCAGAATCATATGTCTAAACACAGTCCGtCTCGGGGCCCGTATGAATGCAAACTGTGTTACATGTATCTGCCAACAAACTATAGTTTCAGTGTACACTCATTGATACACACGCGGCGGTACGAGTGCGTCGTGTGCAAGCGACGCATGATGGACCGTGCCTCCATTATAGATCACTACAAgtcacAACACGAGGGCTTACTCACTATATACACTTGTCAAATATGCGGGAAAGTCTCCAAcaataataaaacacatagGGGTCATATGAGAAACCATCACAGTGGGGACCGTCCAAAATGCGACCAGTGTGGAAAGACATTTATTAATAACGACTCGTTAAAAGAACATCAgcaaattcaTTTAGGTATTAAGAACTACGAGTGCGATACGTGTGGCATGAAGTTCAGAACTAGGACACAAATCAAACATCATCAACTAAAGCACAGCGATGTCCAAGATTATTACTGCGTAGAATGCGACGTAAGATTTAAATCAGCGCATAGTCTTCGGCAGCATCTCACGAAAAGTCTGAAGCACAGAGACAAGGCGACTTTAGTGTTCCCGTGCTCGCGCTGCTCTCGCCGCTTCCCGTCGGCAGCGGCTCTAGCCCGGCACGCGCGCGTGCAGCACGAGGGCGAGCGCGCGCACGcgtgcggcgcgtgcggcgcggcgctggcgtCGCGCGCGTCGCTGGCCAAGCACGCCGCCGCCGTGCACCAGGGCCGCCGCCCGCTGCCCACGCACGTCTGCGACACCTGCGGGAAGGCCTTCCGGGCTAAGAGTGTTCTGACCAACCACGTGCGGACCCACACCGGAGAGAAACCCTTCGAATGCACCGAGTGCGGACGGAAGTTCTCGCAGAGGACGGCAATGAGGACACACATCAAACTCGTGCACCTCAAGATCAAGAGGAACGCTAAGATCAAACCGGAGGTGCCCTTACCGGAATCTCCTAAGGAAGTATTCAAGCCGGAGATCAATATTTTGGAAGCGTGGCGACAACCCTGCGACGTTTACTTTCAAGTTACTGCCGGCCCTTGA
- Protein Sequence
- METMSLGNEDELKYDPELVSSICRCCLSTERLMYDACNFEVLFKDLTGISVLQSDGLPQWLCYECASLMRKAVRFKQKVLRAHTVLYEYLTRCAPFPLDAQDEELSKYSSPYLAATKTLHLDITGKGRSGVYKVLQHEKKTQMSELDDVAIPFLGKEENNVKEEMGFSDYEDNITLEEFRLEANKITEDDLASILQETKVEVKKEEVKKKKKIKKKQLKNVNESEDENEVKNKSSIRKTIELDPNKIRIVNLNPEEQIKQREEESKAGLRFPHQCHLCHKGFNFESKLQNHMSKHSPSRGPYECKLCYMYLPTNYSFSVHSLIHTRRYECVVCKRRMMDRASIIDHYKSQHEGLLTIYTCQICGKVSNNNKTHRGHMRNHHSGDRPKCDQCGKTFINNDSLKEHQQIHLGIKNYECDTCGMKFRTRTQIKHHQLKHSDVQDYYCVECDVRFKSAHSLRQHLTKSLKHRDKATLVFPCSRCSRRFPSAAALARHARVQHEGERAHACGACGAALASRASLAKHAAAVHQGRRPLPTHVCDTCGKAFRAKSVLTNHVRTHTGEKPFECTECGRKFSQRTAMRTHIKLVHLKIKRNAKIKPEVPLPESPKEVFKPEINILEAWRQPCDVYFQVTAGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00186563; iTF_00185564; iTF_00327355;
- 90% Identity
- -
- 80% Identity
- -