Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494457.1:6523101-6528794[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.17 15 7.0 0.5 1 23 41 64 41 64 0.94

2 16 0.074 6.3 8.2 0.5 2 23 93 115 92 115 0.95

3 16 0.63 53 5.2 5.8 2 23 138 159 137 159 0.97

4 16 7.1e-05 0.006 17.7 0.1 1 23 163 185 163 185 0.98

5 16 0.00067 0.057 14.6 3.7 1 23 190 212 190 213 0.96

6 16 1.1e-05 0.00091 20.2 1.6 1 23 219 241 219 241 0.97

7 16 0.46 39 5.7 0.3 3 23 319 340 317 340 0.89

8 16 0.011 0.89 10.8 0.1 2 23 366 388 365 388 0.94

9 16 0.024 2 9.7 0.4 2 23 411 432 410 432 0.97

10 16 0.0001 0.0088 17.1 0.3 1 23 436 458 436 458 0.99

11 16 0.00041 0.035 15.3 3.8 1 23 463 486 463 486 0.98

12 16 0.097 8.2 7.8 0.3 2 23 493 515 492 515 0.94

13 16 0.00015 0.013 16.7 2.4 2 23 523 545 522 545 0.96

14 16 4.4e-06 0.00037 21.5 2.3 1 23 551 573 551 573 0.98

15 16 7.7e-06 0.00065 20.7 1.1 1 23 579 601 579 601 0.99

16 16 1.6e-05 0.0013 19.7 3.3 1 23 607 630 607 630 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.17	15	7.0	0.5	1	23	41	64	41	64	0.94
2	16	0.074	6.3	8.2	0.5	2	23	93	115	92	115	0.95
3	16	0.63	53	5.2	5.8	2	23	138	159	137	159	0.97
4	16	7.1e-05	0.006	17.7	0.1	1	23	163	185	163	185	0.98
5	16	0.00067	0.057	14.6	3.7	1	23	190	212	190	213	0.96
6	16	1.1e-05	0.00091	20.2	1.6	1	23	219	241	219	241	0.97
7	16	0.46	39	5.7	0.3	3	23	319	340	317	340	0.89
8	16	0.011	0.89	10.8	0.1	2	23	366	388	365	388	0.94
9	16	0.024	2	9.7	0.4	2	23	411	432	410	432	0.97
10	16	0.0001	0.0088	17.1	0.3	1	23	436	458	436	458	0.99
11	16	0.00041	0.035	15.3	3.8	1	23	463	486	463	486	0.98
12	16	0.097	8.2	7.8	0.3	2	23	493	515	492	515	0.94
13	16	0.00015	0.013	16.7	2.4	2	23	523	545	522	545	0.96
14	16	4.4e-06	0.00037	21.5	2.3	1	23	551	573	551	573	0.98
15	16	7.7e-06	0.00065	20.7	1.1	1	23	579	601	579	601	0.99
16	16	1.6e-05	0.0013	19.7	3.3	1	23	607	630	607	630	0.97

Sequence Information

Coding Sequence: ATGCCTGATAAGGAAACTAAACTAGCCATGCACaaagaactaaaaaaacatCAACATAATCTAAGCGTCATCCTACAATGTTCGAACGCGACCACGATACTTAGATGTGGAGCCACTGGCTATATGTGTGGATACTGCGTCGCCGAATTCGCCAAACCATCCCTATTAAAATGCCACACTTTATCTGCCCACGCAACCGAAATCAATCCAAAAACTGGATATCTGAAGTGCGGCGTCATGACAGAGTATTTCGTCAAATTAGACATTACGGATCTCACGTGCAATCTTTGCTCAACAAAAATCGATTCGTTAGACGAGTTACTGAAACACCTTCAGAATAAGCACGAGAAATACATTCACACTGATATCAAATGCCATTTCTTGCCATTCAAATTCGATACGGAACAATTAACTTGCTGTTTATGTCAGATGGTCTTCGATAAATTCAAGAAAATGCAAGAACACATGCATACCCACTATAGGAATTACATTTGTAATATCTGCGATTCTGGATACGTCAATCAGGGATCCTTGAATAGGCACGCTAATACTCATATTAAAGGCGTTTACAAGTGCAAAGCATGCGATAATACTTATTCTTCCCCAAAAAGATTGAACAAACACGTAAGGAGACATCATTTGTTGGAAAGAAAACACAAGTGTCCGATCTGCGAAAAGAGTTTTTTCTACCCCTATGACGTGAAAAAACATATGGTCATGCACACAGGTGCAAGAGAGTTTCAATGTGTTCGGGGAACTAGAATAATCAAAATAGAAAAGCCATCAAAATCAACAGTTGAGTTGAAGTTTGTTACAAAAAGGACCGACCCCCTTGACAGAGAAGTACGCATAACCTCTTTGACTGAACCAATGAAGAATAGAATCAATCTTAAAAACATACTTCTTAATTCTAACGCGAATCCAATTAGGTGCAAAGACAGTCAGGGGTACGGGTGTTCATTCTGCCCAAAACAGTTCCCAGAACCCAAAATTCTAAAAAAGCACTTCCTTGAAGAACACAAcagtgataaattaataaaatatatgtcaaCGAGACTGTTTGAGCATGTTATCAAACTTGATATAACTTACTTGAATTGCGCACTGTGTGATAAAGATTTCGAAAAATTAGACGAATTTGTTGTACATCTAAAAAATGAGCACAACAAACCGGTGTATGTTGAGGCTAAAACACAAATCGTTCCGTTCAAATTCGATTCACCAGAACTTAAATGTGTAATATGTTCAACTGCATTCCTGAGTTTCAAACTTCTACAGGAGCATATGAACTCACATTTCGGGAACTACGTTTGTGAGATGTGTGGCAGTGGGTACGTCACTGAGAAGCTTCTCACAAGTCATATGAAACGGCATGGAAGCGGACAGTACAAATGCGAGCAATGCGACAAAACATTTACTAGCGTTTACAAGAAGCGGGATCATCAGAAACGGACACATTTAGGTTTCAAACGAAATAAATGCAGTGAATGTTCCGAAAGGTTTGTAGATTACTGGAAAAAGATTGATCACATGGTGAAAGTACACAATATGCCTCCTATTGTCTTGAAATGTACCGCTTGCGAGCGAACATTCACCAACCAGAGATCTTTGTCACGTCACACGAAGAAAGATCATCTCTTAGAGCGAAGACataaatgtcctgaatgtgacatGAAGTTTTTTGGGAAGAGCAGTTTGCAGCGCCACATGGCTAAGCATACAGGGATCCGGCAATTTCGGTGTGACATCTGTTTGAAATCTTACGGCAGGAAAAATACTTTGAGAGAGCATATGAGGATACATGCGAATGATAGGAGGTTTGCTTGTCCTCATTGTGGACAGGCTTTTGTTCAGAAATGTAGCTGGCGAAGTCATATGCGATCCAAACATGGAGAAGAAGTCTGA
Protein Sequence: MPDKETKLAMHKELKKHQHNLSVILQCSNATTILRCGATGYMCGYCVAEFAKPSLLKCHTLSAHATEINPKTGYLKCGVMTEYFVKLDITDLTCNLCSTKIDSLDELLKHLQNKHEKYIHTDIKCHFLPFKFDTEQLTCCLCQMVFDKFKKMQEHMHTHYRNYICNICDSGYVNQGSLNRHANTHIKGVYKCKACDNTYSSPKRLNKHVRRHHLLERKHKCPICEKSFFYPYDVKKHMVMHTGAREFQCVRGTRIIKIEKPSKSTVELKFVTKRTDPLDREVRITSLTEPMKNRINLKNILLNSNANPIRCKDSQGYGCSFCPKQFPEPKILKKHFLEEHNSDKLIKYMSTRLFEHVIKLDITYLNCALCDKDFEKLDEFVVHLKNEHNKPVYVEAKTQIVPFKFDSPELKCVICSTAFLSFKLLQEHMNSHFGNYVCEMCGSGYVTEKLLTSHMKRHGSGQYKCEQCDKTFTSVYKKRDHQKRTHLGFKRNKCSECSERFVDYWKKIDHMVKVHNMPPIVLKCTACERTFTNQRSLSRHTKKDHLLERRHKCPECDMKFFGKSSLQRHMAKHTGIRQFRCDICLKSYGRKNTLREHMRIHANDRRFACPHCGQAFVQKCSWRSHMRSKHGEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -