Pfes019375.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- Zfy1
- Assembly
- GCA_950381575.1
- Location
- OX494450.1:423149-427204[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.37 31 6.0 0.1 3 23 248 268 247 268 0.97 2 14 8.9 7.5e+02 1.6 0.3 6 23 280 298 280 298 0.92 3 14 2.1e-06 0.00017 22.5 0.4 3 23 350 370 349 370 0.97 4 14 8.6e-05 0.0073 17.4 1.0 1 23 376 399 376 399 0.94 5 14 0.00094 0.08 14.1 0.3 1 23 405 427 405 427 0.98 6 14 4.5e-05 0.0038 18.3 1.1 1 23 433 455 433 455 0.97 7 14 2.9e-05 0.0024 18.9 5.1 1 23 461 483 461 483 0.99 8 14 0.024 2 9.7 2.5 1 23 551 573 551 573 0.95 9 14 0.00035 0.029 15.5 2.0 2 23 580 602 579 602 0.92 10 14 4.3e-07 3.7e-05 24.6 0.9 1 23 608 630 608 630 0.99 11 14 1.1e-06 9.1e-05 23.4 4.4 1 23 636 658 636 658 0.98 12 14 3.9e-05 0.0033 18.5 0.2 1 23 664 686 664 686 0.98 13 14 0.00053 0.045 14.9 0.7 1 23 692 714 692 714 0.93 14 14 0.00058 0.049 14.8 3.6 1 23 720 742 720 743 0.93
Sequence Information
- Coding Sequence
- atgaataatgaaacggaaaaaatatttatattaaatactggcCAAGGTCCGTCATCAACGTTGTCACAAAAGCTGGTTCAAGCCGAGATGCCGGGGACCACACAGACGAGCCTTGAGAATGTGGAAGATTTCTCCAATGTTTGTCGCACATGTGCAACTGTCACCGAGTTTGTCATACCCATATTTTCTGGAGATGGTCTGCAGAACAACCTTGCCGAGAAGATTCATAAACACTTACCAATCAAgGTGAGCGAAGCAGATGTTCTGCCGCGCGTGGTGTGCTACCAGTGCGCGAGCACGCTGCTGGCGTGGCACGAGCTCGTGCAGTGCTGCGTGCAGGCTGACACCGCGCTGCGAGCGCGCGCTTCGCTGCCCGTACAGGAATCAAAACGCACAGACTCCAAGCCAAACTCAACTTTAACAGAAGACACCCAGAACAAGTTATTTTACACCAACGTCAGAAATGTTCTCATCAATTACTTTCTTAATGATTTGGATGAAGATAACTTGGATGTGGACTTAGTTTGTCAAAAGTGTATTGAGAAACCCGCCCTGGCAACTGTGCTCAGTCTCGCGGAGCACATGCAATACGACCACCCGCATGACGTGCGCGGCGACGAcgctattaaaatgtttataacaaACTATGTTACATTCGAACAAACGTTGGCGGAAGACTCCGACAGAGAATCATCGTCACATAAGGAAGAGAAGAGCCAAGTAGTGTTACCGAGTCTGCTGTGTCCGTTCTGCGCAGACGTGTTCTCGTCCCCTACGCGGCTGGTGTACCACCTGAACCGGCATGTGGAAGTGAGCGTCGAGGAGGGAGTCATGTGCTGCGACCACCTCTACGCCGACAAGAAGAGCTTCGCGACACACCTACAGGAGGCACACGTGAAGCTCGCGGCAGGCGCAACCAGGCCTAGCCTCACTGCTGGTGATCATATAAAAATCAAGCAACATTCTATCGAGTACCACGAAGAAAGGAAAACCAAGCAAGGTAAGAAGCAACAGAGCCCCAACAACCAGAAGTACATTCCGGTGGCTTGCCCGCAATGCGACAAGACCTTCTCCAACAAGTACAACATGCTAGTGCACCTCCGTGGTCACGGCGCAACCGCCTCCTTCGCCTGCGACAAGTGCCAGCGAACGTATCGCAACCAAGGATCCCTCAACAACCATAAAAACTTGGTGCACAAGGGAATACTGAATTTTCCATGTTTCGAGTGTGGCGAAGCGTTCCCGACGCGCTCAGCACGCGACGTGCACCACCGCATCCACACCGGGGACACGCCGTACAAGTGCAGCCACTGCGGGAAGGCCTACCGTGCTAAGAACACGCTCGCCCGGCACGAGGAGATTCATCTAAATGTCAGAAAATATGAGTGTGACACCTGCTCCAAGAAGTTTAGAAGGAAAAGTCACCTGGACTACCACGTAAAGACTCACAGGAAAAACCATTATGTTAACGATAAACATAATAGTGAAGAATATCCCGATTTTACTGACTCGAGTGCGTctgaaattgaagaaagcaACGTAGACAAGTTCGACGACTTGTCGGAATGTAACATGAGGAGAGACATGCTGAACGAGGAGACTCGGCTGGAGCTGAGCGAAGTGCAGCACAAGATTAACGATAAAATGTACTACACGTGTAAGATATGCGGCAAGAACTTGAGCTCGGCGCACACGTACGTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTCTGCGGCAAGCAGTTCCGCGCGCCCAACGGCCTGCAGCGCCACCTCACGGAGACACACGAGCGCGTGCGCAGATACACCTGCACGCTCTGTCCCAAAAACTTTGCTAACTCGCAGAACTTAAAGCAACACTTGCGAATACACACAGGAGAGAAGCCATTCGTGTGTTCTCACTGCGGCAAGAGGTTCACCCAGAGCGGGTCCTTACACGTGCACCTGAAGACTCACAGCGACCAGTTCCCGTACGAGTGCGCGGAGTGCGGCGCCAAGTTCCGGCTGCGCTCGGGGCTGGCGCGGCACCAGCTGAAGCACACGGGCGAGCGGCCGCACGTGTGCGCGCTGTGCGGCAAGGGCTTCCGCCAGCGCCGCGAGCTCAGCAGCCACAGCCTGGCGCACTCCGACGCCAAGCCGCACGCCTGCGCGCTCTGCGGCGCCGCCTTCCGCACGCGCCGCGCGCTGCGCCACCACGCGCGCCGCCACCACCACCAGGAGCCGCCGCCCCTCTACCACCACCTCGCCCACTACTGA
- Protein Sequence
- MNNETEKIFILNTGQGPSSTLSQKLVQAEMPGTTQTSLENVEDFSNVCRTCATVTEFVIPIFSGDGLQNNLAEKIHKHLPIKVSEADVLPRVVCYQCASTLLAWHELVQCCVQADTALRARASLPVQESKRTDSKPNSTLTEDTQNKLFYTNVRNVLINYFLNDLDEDNLDVDLVCQKCIEKPALATVLSLAEHMQYDHPHDVRGDDAIKMFITNYVTFEQTLAEDSDRESSSHKEEKSQVVLPSLLCPFCADVFSSPTRLVYHLNRHVEVSVEEGVMCCDHLYADKKSFATHLQEAHVKLAAGATRPSLTAGDHIKIKQHSIEYHEERKTKQGKKQQSPNNQKYIPVACPQCDKTFSNKYNMLVHLRGHGATASFACDKCQRTYRNQGSLNNHKNLVHKGILNFPCFECGEAFPTRSARDVHHRIHTGDTPYKCSHCGKAYRAKNTLARHEEIHLNVRKYECDTCSKKFRRKSHLDYHVKTHRKNHYVNDKHNSEEYPDFTDSSASEIEESNVDKFDDLSECNMRRDMLNEETRLELSEVQHKINDKMYYTCKICGKNLSSAHTYVFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYTCTLCPKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSDQFPYECAECGAKFRLRSGLARHQLKHTGERPHVCALCGKGFRQRRELSSHSLAHSDAKPHACALCGAAFRTRRALRHHARRHHHQEPPPLYHHLAHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -