Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494439.1:4978295-4991500[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.4e-05 0.0071 17.4 2.2 1 23 421 443 421 443 0.97

2 20 0.013 1.1 10.5 2.0 1 20 449 468 449 471 0.94

3 20 2.2e-05 0.0019 19.3 5.6 1 23 490 512 490 512 0.98

4 20 0.0001 0.0087 17.2 4.1 1 23 518 540 518 540 0.99

5 20 3.9e-05 0.0033 18.5 5.3 1 23 546 568 546 568 0.97

6 20 8.9e-06 0.00075 20.5 7.4 1 23 574 596 574 596 0.97

7 20 7.5e-07 6.4e-05 23.9 2.9 1 23 602 624 602 624 0.97

8 20 0.00011 0.009 17.1 6.7 1 23 630 652 630 652 0.97

9 20 0.00011 0.009 17.1 6.5 1 23 658 680 658 680 0.97

10 20 5.1e-07 4.3e-05 24.4 1.9 1 23 686 708 686 708 0.98

11 20 5.2e-05 0.0044 18.1 7.9 1 23 714 736 714 736 0.98

12 20 4.3e-05 0.0036 18.3 6.8 1 23 742 764 742 764 0.98

13 20 1.1e-05 0.00091 20.2 4.5 1 23 770 792 770 792 0.98

14 20 3.7e-06 0.00032 21.7 6.3 1 23 798 820 798 820 0.97

15 20 2.3e-06 0.00019 22.4 5.0 1 23 826 848 826 848 0.98

16 20 3.2e-06 0.00027 21.9 6.0 1 23 854 876 854 876 0.98

17 20 1.8e-05 0.0016 19.5 8.1 1 23 882 904 882 904 0.97

18 20 2.7e-05 0.0023 19.0 7.5 1 23 910 932 910 932 0.96

19 20 0.00077 0.065 14.4 0.3 1 23 939 961 939 961 0.96

20 20 0.036 3.1 9.1 3.7 1 23 971 993 971 993 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.4e-05	0.0071	17.4	2.2	1	23	421	443	421	443	0.97
2	20	0.013	1.1	10.5	2.0	1	20	449	468	449	471	0.94
3	20	2.2e-05	0.0019	19.3	5.6	1	23	490	512	490	512	0.98
4	20	0.0001	0.0087	17.2	4.1	1	23	518	540	518	540	0.99
5	20	3.9e-05	0.0033	18.5	5.3	1	23	546	568	546	568	0.97
6	20	8.9e-06	0.00075	20.5	7.4	1	23	574	596	574	596	0.97
7	20	7.5e-07	6.4e-05	23.9	2.9	1	23	602	624	602	624	0.97
8	20	0.00011	0.009	17.1	6.7	1	23	630	652	630	652	0.97
9	20	0.00011	0.009	17.1	6.5	1	23	658	680	658	680	0.97
10	20	5.1e-07	4.3e-05	24.4	1.9	1	23	686	708	686	708	0.98
11	20	5.2e-05	0.0044	18.1	7.9	1	23	714	736	714	736	0.98
12	20	4.3e-05	0.0036	18.3	6.8	1	23	742	764	742	764	0.98
13	20	1.1e-05	0.00091	20.2	4.5	1	23	770	792	770	792	0.98
14	20	3.7e-06	0.00032	21.7	6.3	1	23	798	820	798	820	0.97
15	20	2.3e-06	0.00019	22.4	5.0	1	23	826	848	826	848	0.98
16	20	3.2e-06	0.00027	21.9	6.0	1	23	854	876	854	876	0.98
17	20	1.8e-05	0.0016	19.5	8.1	1	23	882	904	882	904	0.97
18	20	2.7e-05	0.0023	19.0	7.5	1	23	910	932	910	932	0.96
19	20	0.00077	0.065	14.4	0.3	1	23	939	961	939	961	0.96
20	20	0.036	3.1	9.1	3.7	1	23	971	993	971	993	0.99

Sequence Information

Coding Sequence: ATGAATCAGGAACACCATAATATGAATGCGGGTGGTGGCCAGCCTCCAGGAACTTCGGAGTCACAGAACCAAAGAGTGCAATCTTCACAGCAACAGCAGCAAAATAACTTGCCTGCCACGACATCAGCTACTGATCTGCGGGTGAACTCAGCGGCTGTGAACGTCGCTTTGTCTAGTGTTGCGAAATATTGGGtgtttactaatttatttcCCGGTCCCATACCGCAAGTGTCTGTGTACGGATTACCTGCCGGTGCAAGGATTGAAAATGGAAAACCTGTTCAGGATCTTGGTCAAGCTCATGCCAGTATACTAAATGGGGATCCAAATATTATACTGGGGCATCATGCTGGACAATCGCAGGTCACAGTGTCTGCTGCAGGTGGGCAGCAGATCCCTGTCTCTCAAATTATTGCTACACAGTCAGGCCAGACACATGAAGCGCTTGTGGCCCACAGTCAGCAGGCCGAGCTGGCGGCCGCACAAGGCAATGGCAACAACACCCAGGTGTCAGTTAGTGCGGGCCAGCCCACTCATCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGggaCATCATTCACAACAACACCTAATGCAGCAACAGCTTATGGCACGACCAGAACACAGCAACCAGCAGATTCAGCTGACTGTGAGTGAAGATGGCATAGTAACAGTAGTGGAGCCAGCAGGCAGCAAGATGGTGGACAAAGAGGAACTGCATGACGCTATCAAGATGCCATCCGACCATACTCTCACTGTACACCAGCTCCAACAGATTGTTGGACAACAGgtaataGACAGCGTAGTTCGTATAGAACAAGCAACTGGAGAGCCAGCCAACATACTTGTGACTCACAATCCCGATGGCACAACGTCAATAGAAGCCAGTGCAGCGGATCCTCTAATTGTCAAGGATGAAAAGAGCgccaacaaaatagaaacagcGCAGTTCGCGATTCCTGCTGAAATTAAAGATATCAAAGGGATTGACTTAAAGAGTGTGGGTGCCATGGGGATGGAAGGTGCTGTCGTGAAGATATCAGCCGGTGCTTCAGAGCACGACCTCCACGCCATGTACAAAGTGAACGTCGAAGACCTGTCGCAGCTTCTTGCCTATCATGAAGTGTTTGGAAAGTTAAATTCTGAAGGACAACAACAAGCCAAGgtAATAAGCGAAGTAGAAGTGGAAGCAGGTACCAGCGCTGCAATGGCAGAAGCGGAATCATCGCCCGGCCATCATTCTTGTGATATTTGCGGGAAAATATTTCAGTTCCGATACCAACTCATTGTCCATAGGCGTTATCACGGCGAAAGTAAACCGTTTACGTGCCAAGTATGCGGTTGTGCGTATGCCAATCCCGTGGAACTATCGAGACACGGAAAATGTCATCTTGCAGGTGACCCGAACGAACGACACGCTAAAAGGATGGCTCAAGATAAGCCATATGCTTGCACCACTTGCCACAAAACATTCTCTCGCAAAGAACATTTAGATAATCATGTTCGAAGTCATACAGGCGAAACCCCATACagATGCGAGTTCTGCGCGAAGACTTTTACCCGGAAAGAGCACATGGTGAATCACGTGAGGAAACACACAGGAGAGACTCCTCACCGTTGTGATATATGCAAGAAGAGTTTTACTCGTAAGGAGCACTTTATGAACCACGTCATGTGGCACACAGGTGAAACGCCTCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGGTCGCATACAAACGATACCCCATTCCGATGCGAATTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCATACGGGCGAGACCCCACATCGTTGCGACTTTTGTTCGAAGACATTCACTCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACAGGCGAATCGCCGCACCGCTGCAACTTCTGCAGCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCATGTGCGACAACACACCGGCGAGACCCCCTTCCAGTGCGGATACTGTCCAAAGGCCTTCACTAGGAAAGATCATCTAGtAAACCATGTTCGTCAGCACACTGGGGAATCCCCTCACAAGTGCTCGTTCTGCACAAAGTCGTTCACCCGCAAAGAGCACCTGACGAACCATGTGCGACAGCACACGGGCGAGTCCCCGCACCGCTGCACCTTCTGCGCCAAGTCGTTCACTAGGAAGGAACATCTCACCAATCATATCAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTTCTGTCCTCGGGCGTTTGCGCGCAAGGAGCACCTCACCAACCACATCCGTCAACACACCGGCGTCACGCCGCACTCCTGCTCCTACTGCAACAAGACCTTCACCAGGAAAGAACATCTCGTTAACCATATTCGACAACACACGGGCGAGACTCCTTTCAAGTGTACGTACTGTTCGAAATCGTTCTCTCGTAAGGAGCACCTAACGAACCACGTCAATCTTCACACGGGAGAAACGCCCCACAAATGTCCCTTCTGCACCAAAACATTCTCCAGAAAAGAACACTTGACCAACCATGTCAGAATTCACACGGGTGAGTCGCCACACCGGTGTGATTTCTGCCAGAAGACTTTCACACGCAAGGAGCACCTGACTAATCATATGAAACAACATACCGGCGACACCGCGCACGCCTGCAAGGTCTGCTCGAAGCACTTCACTAGGAAAGAACATCTTATTACGCACATGAGGTCGCATAGTTGTGGCGAAAGGCCATTCAGTTGCGGCGAGTGTGGAAAATCATTCCCTTTGAAAGGCAATCTCCTGTTCCATGAACGTTCGCACAACAAGGCCAATGCTGGTAATAGGCCCTATCGGTGTGGAGTTTGCGGCAAAGAGTTCCTTTGCAaagGTCATTTGGTGTCTCATCGACGCACTCACGCAGAAGGGGATGAAGGTGCTCCGAGCACCGAAACTCCTGCTGAGACAGAAGATTGTACTGACTGTAACAAGTGTGTGAAAGCTGAGCCCGAACACACAAACGAAAGAAAGTTAGAAGTCAGAACTACGGCGGAAACGAGGCCGGCAGAAAGCAATGTTGCACAAACGCAACCTAACTCTACTACTGTAATGCAAATAACCAACCAGCAGGTCCGCGCGGGTGTAGCGGGTGTGGCGGGCGTGGGCAGCGTGggcgcggcggcgagcgcgggcgtgGCGGGGGGCACGTTCACGCACACGGTGAGCGCGCAGCACCACGCGGGCGCCGCCATCTCACACCACCCAGTCACCGTCAACTACTAG
Protein Sequence: MNQEHHNMNAGGGQPPGTSESQNQRVQSSQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSQQAELAAAQGNGNNTQVSVSAGQPTHQQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMARPEHSNQQIQLTVSEDGIVTVVEPAGSKMVDKEELHDAIKMPSDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQAKVISEVEVEAGTSAAMAEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGCAYANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFARKEHLTNHIRQHTGVTPHSCSYCNKTFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGDTAHACKVCSKHFTRKEHLITHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKANAGNRPYRCGVCGKEFLCKGHLVSHRRTHAEGDEGAPSTETPAETEDCTDCNKCVKAEPEHTNERKLEVRTTAETRPAESNVAQTQPNSTTVMQITNQQVRAGVAGVAGVGSVGAAASAGVAGGTFTHTVSAQHHAGAAISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -