Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494455.1:382283-384217[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-12 6.1e-10 39.4 0.0 2 36 11 46 10 53 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-12	6.1e-10	39.4	0.0	2	36	11	46	10	53	0.92

Sequence Information

Coding Sequence: atggAGAGGGTAAAGAAAGGCAGTTGGGAGcctgaaaatttaaaagttgCTATTGAAAAAGTAACTACAAAGAAGATGTCCTTAAGGGAAGCTGCTTCAAGATATGGTATACCTACTACTACTTTATATGATAAGCTTAAACTCATAAAAGAAGGAAAAGAAGTACAATTAAAGCCCATCTTAGGGAGATTTATGAAAACCTTTTCTCCAGAATATGAAAATGTCCTAGAAACACATATCAGAGATTTGGCTGATAGGTGCATGCCATTGACAAAAAAGGAATTTTTGAAACTAGCCTTTGATTTAGCTGTTCAGCTCAAAATACCTCATCGTTTCAATGTGCAAAAGAATACAGCtggaaaacatttttattatgaatttatgaaaCGTCATCCAGGTTTATCACTGAGAACAGCAGAGTCTACGAGTTTGATGCGTGCAGTTGGATTCAACAAACCACAGGTGGATGTTttcttcaataattttaaaagtcttCTAGATAAACACAATTTCACACCGTCCAATATTTATAACTGCGATGAAACTGGAGTTACAACcgttcaaaaacattcaaaagttATAGCAAAGAAGAATGTTCGTCAAATAGGAAAGCTTACGTCGGCTGAAAGGGGGAAAAACGTTACAATCTTATTTTGTATGAGTGCCACAGGTTATTTTGTTCCTCCCTTTTTCGTTTTTCCGCGGCAGAGGATGCATGAACGGCTAATGATAAATTCGCCTCCTGAGAGTGTGGGTGTCGCACAGCCCAAAGGCTGGATGAACAGCGAGTTTTTCTTCAAGTGGTTGCAACACTTCACAAATTTTTCTCGCCCCTCAAAAGAAAGCCCAATTTTGCTTCTACTTGATGGACACAGCAGCCATAAAACTTTGGAGGTGATAAACTGGTGCAGAGATAACAACATTCACCTAATTAGCTTTCCACCTCATACAACACACAAGCTCCAGCCATTGGACAGATCGTTCATGAAACCGTTCAAGAATGCATATAATGAACAATGCGGGATGTGGATAAGAGCTAATGCAGGAGCTAGAATAACTGAATATGATATTGCTGGACTCGTTTCTAATGCCTTTATAAAGGTAGCACGTTATGATATAGCCGCAGCGGGCTTTAAATGTACTGGCATATATCCAttcgacaataatatttttactgattTGGATTACCTGCCAAGTGATGTGACAAATATTCCAATAGAAGAATCTAATGAAAATCTTCCAATGAATTCAACAGATTTGAATGACAGGCCACAAGTTTATCCATCTAGTTCTTCTCATGTAGATGTCGAGGAACCAACGCCTCAGCCTTCTACTAGCGAAGGCCCGGATTCTATGAGTTTGATCTATCAGTCTATTTCTTCTCGTGCAGATGTCGAAGAACTAGCATCTCAACCTTCCACTAGCAAAGAACCGGATTTTGTTAGAATAGTCTTTCCATCTAGCTCTGTTCGTGCATCCGTTGAGATACCATCACCTCAACCTTCTACTAGTCTGGATTATGTGAGACaagctattttaaatatttcacctTTGCCAGACGCTGCAAAGAAAAGAGCTCAAGCAAGGAAACGCAAGTCTGAGAAAAGCCAAGTCCTTACCTCGTCTCCTTATAAATTGGCTATGGAAGCGAAAGAAAACGAGAAGaaaatgaaagaagaaaaaaaattacgtcgTGGTACATTTAAGAAGACTGTTAAAGAAGagaagataaaaaaatctaaagttttgccattaaaagaaaattgtcaGCAGCAATCACAATCTCTGCACGATACCTTATGTGTTGTTTGTCTAGAAGGACATGAGGAGGACTGGATTCAGTGCAACTCGTGTAAGGAGTGGGCTCACGAGGCATGCGCTGATATTCCAGAGTGCTCTGACCTATATATATGTGACAGATGTCACCTTTTTTAG
Protein Sequence: MERVKKGSWEPENLKVAIEKVTTKKMSLREAASRYGIPTTTLYDKLKLIKEGKEVQLKPILGRFMKTFSPEYENVLETHIRDLADRCMPLTKKEFLKLAFDLAVQLKIPHRFNVQKNTAGKHFYYEFMKRHPGLSLRTAESTSLMRAVGFNKPQVDVFFNNFKSLLDKHNFTPSNIYNCDETGVTTVQKHSKVIAKKNVRQIGKLTSAERGKNVTILFCMSATGYFVPPFFVFPRQRMHERLMINSPPESVGVAQPKGWMNSEFFFKWLQHFTNFSRPSKESPILLLLDGHSSHKTLEVINWCRDNNIHLISFPPHTTHKLQPLDRSFMKPFKNAYNEQCGMWIRANAGARITEYDIAGLVSNAFIKVARYDIAAAGFKCTGIYPFDNNIFTDLDYLPSDVTNIPIEESNENLPMNSTDLNDRPQVYPSSSSHVDVEEPTPQPSTSEGPDSMSLIYQSISSRADVEELASQPSTSKEPDFVRIVFPSSSVRASVEIPSPQPSTSLDYVRQAILNISPLPDAAKKRAQARKRKSEKSQVLTSSPYKLAMEAKENEKKMKEEKKLRRGTFKKTVKEEKIKKSKVLPLKENCQQQSQSLHDTLCVVCLEGHEEDWIQCNSCKEWAHEACADIPECSDLYICDRCHLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -