Pfes019596.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- -
- Assembly
- GCA_950381575.1
- Location
- OX494450.1:4109615-4110307[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-16 2.8e-13 50.1 0.1 1 45 17 61 17 61 0.97
Sequence Information
- Coding Sequence
- aTGCCAAATAAGTATCAGAGAAAAGCTATAGCCACTCGTGGTAATTGGAGTGAAGACTCATTAAAAGCTGCTataaattccataaaaaatgGAGAATTGTCTGTGTATAAAGCGGCAATTGTCTACAACATACCTCGTAAAACACTAGAAAGAAGGTACAAGACTAACAATGACAAAAAAAGACCAATGGGACCTACGTCAATGCTTGGGgaccaaaatgaaaaaaaacttgctGATCATATTAAAACGATGCAAGAAAAAGGATTTCCGCTAACAATCAGTGATGTAAGAATGATTACCTTCCAGTTTGCTGaacaattaaacataaaacataaattagcaGTACTGATCTCAGTGAACCAATACTATGTGATACATCGTACGAAGAAGATAAAGAAAACGAGGCAGACAACTGCGCTGGATGCGgagaaaattattataagactCGTCTTGTTGAAGATTGGCTCCAGTGCCTTATTTGTGACAGATgggtacatgaaaattgtaccGCGTTTGATGATATGTGCTCCACATGTGGACAACagaaaaaaagagaagctaAACAACCTGTATTTCAAGGCAAGGGAAAGGGAAAAGGGAAGTCAAGCACTGGCCATCTATCCCGTACAACTACGGCCAACTCACCCTGATGTGTCGGGAGAGATGGccaactcaatattttttttaaattga
- Protein Sequence
- MPNKYQRKAIATRGNWSEDSLKAAINSIKNGELSVYKAAIVYNIPRKTLERRYKTNNDKKRPMGPTSMLGDQNEKKLADHIKTMQEKGFPLTISDVRMITFQFAEQLNIKHKLAVLISVNQYYVIHRTKKIKKTRQTTALDAEKIIIRLVLLKIGSSALFVTDGYMKIVPRLMICAPHVDNRKKEKLNNLYFKAREREKGSQALAIYPVQLRPTHPDVSGEMANSIFFLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01221422; iTF_01221423;
- 90% Identity
- iTF_01221422; iTF_01221423;
- 80% Identity
- -