Pfes023927.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- arid5b
- Assembly
- GCA_950381575.1
- Location
- OX494457.1:360783-369685[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 2.5e-08 34.9 0.0 3 89 162 235 160 235 0.87 2 2 2.4 6e+03 -1.6 0.2 41 65 752 776 722 793 0.52
Sequence Information
- Coding Sequence
- ATGAAATTTCTTTTCGTTATAGAAGTGGACGCCGACGCGCCCGGGGTAGTAGTGTTCTCGTACCCGCGGTACTGCCGCTaccgcgcgctgctggcgcggCTGGACGGGCTGCAGGCCGACTGGCTGCGGGACTCGCTCGTCGCCGCGCTGGGGGGGTACGCCGCGCCCACCAACAACACCAGGATACTGTACTGCAAGGACACGTTTGAGTACCCGGAGTTGGAGGGGCACGAGTTCGTGTGCAACCACCTCGCGCCGCGCCTCAAGGGCCGGCCGCGGGGACGTCGCCGCCGCGCCCCCCACTCGCCCTCGCCCTCCCCCTCTCCGGAGCCCGAGCCCTCCGACGCTGAGAACACTGACGACATGCAGCCTGGAGACACTTCCTACCCGAGTCGCCGACGCCTGTCCCTCCGTAACGGCGCTCCTCAGCAGAGCGAGGATGAGGATGACGACTGCAAGAGGATAGAGGAGACGGCTGAGGACCGCGCCTTCCTGCAGCAGCTCAAGATGTTCTACAAGAGCCGGAGCGAGCCCTTCAAGAGTGGCCACACGCTCAAACACTggTCGCTGCGCGCGCTGTACGGCTGGGTGGTGTCGCGCGGTGGGTACGAAGCCGCGTGTCGCCGCCAGCTGTGGCGCGCGCTCGCCCCCGCGCAGCCCGCGCGCGCACGCAGACACTACGAGAGATTCCTACTACCCTTCGAAAATCACGAACGCCGTAACGGCTTATCCTACAAATTAAACGGTAAAATTGACTGCGAGCCACAAACCATAGCCACTATAGACGTCACTGACTCACCATTAAGAGACGACGACGTCAAAATCCTACGTACACCGTCCCCAAAACCCGAAAACCTAGAAAAACTCGAAAAGTACGACAAACTCGAAAAGTTCGAGAAACTCGAAAAACACGAAAAAGGCAGTATTGATTCGGAAACGGGTGAAATTACGTCGAAAGATGAATTAATAGTGAAAAATGCTGAGGAGCTGAATCGAGAGTTTTTGGAGTCTTTGAATAAAGATGAGAAGGTCAGCAAGATTTCGGTGAAGCCGGTGGACCAGCTGGTGGAACCGGCCAAGGTGAAGATGTACGAGAAGGATGACAAGGATCTGCAGTACTTGGATACGTCGAAGATCAGTTTAGCAGAATCGGCGTCACCTCGAGCGCCACCAAACGGCCACACTCCTAATGACCTTAAGAGCTCCCGACCGGCCGGGAGGAGTTCCTTACGGGCTGTAAGAGTGAAACCTCAACGAAATCAACCTCCCTCCTCCACACCGCCGGGCAGCGCGTCCAGCACGTCGTCCCCGCCGGCGCCGCTCACCAACTTCGGCATCCAccacccgccgccgccgccgctggaCGACGACATCGTGGAGGTCCCATACAAGCCAAAAACTCCAGAAATAATCGATCTCGACGAGTACCCTGAAAGTCCTCAAGCAGTCAAGAAGAAAAAGCTAGACATCCTCAAAGAACGAGGGTTGGAAGTCACGGCCTTACCTCCCTGGCAGCCACACCCTCAGGTCCTGGGTCCACCTCTCATGCTGAATCCTGCGGTCCAGCACCAGATCATGACGCAGGCACAACTCTTCCAAATGTACAATATCATGCCGCAGAACTACGGCAACGGCCTGCAACCACCAAAGGTAATACAGGCATCTTCTATCTTCGGGACGGCAGGACCTGAGAAGACAGTCTACGGGAATCCCAAGGACCCCTTCATGCCACCACCTCATGTCTTACACGGAGCCCCTTTGAAGCCTCTAAGAACAGCACCAACGACGCCAGCCACTCCTCAGGATATCCTAGACTTAACTTGTAAATCCACTAGCCCGCCCCCTCAGAAACCAACAGTAGAAATAGTCAGGGTACCAAATTCTCCTTCTCCGAAATTAGCTCCTCAAAATTTATCGAAAAATTATACGCTAGTCGACGGAAAGGCAGTTGTAGGATCTAATTTAGAAATAACTTTAGTCAATAAAGCTCAAAGTCCCAACAAGAATCGACCGCCTCAAAAACGGTCGAGCAACGGGAAATTCATGTCAACGAAAACCCCAACACCTCCTAAAGACACCTATCCTAAATTTACCAGCCCCTCTCATAGCAATATACAAAAGAAACCTCCGATCACGATCCCTAGCTACCAAATACGAGAGGATACATCACTACAGAATGCGatgaaaaatcaaaatttagCCCAAATTATGGATCTCCAAAAACACCAGAACTTAGCTCAAATAATGGACCTCCAGAAGAGCCAGAACTATGGTCAGATAATGGACCTTCAGAAGCACCAGAATATTGGCCAGATGCTGGAGCTGCAGAAGAGCCAGCAGCTGGCGCAGCTGGTGGAGATGCaggcgggcgcgggcgaggcgCAGGCGCTGTACCGCCTGGCGCTGGCCGGAGCACCACATGCACGCCAGCTGGCGCTCTACCGCGAGCTGCTCGCCGCTCAGCTGCACCACACGCCCACCACACAGTAG
- Protein Sequence
- MKFLFVIEVDADAPGVVVFSYPRYCRYRALLARLDGLQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPHSPSPSPSPEPEPSDAENTDDMQPGDTSYPSRRRLSLRNGAPQQSEDEDDDCKRIEETAEDRAFLQQLKMFYKSRSEPFKSGHTLKHWSLRALYGWVVSRGGYEAACRRQLWRALAPAQPARARRHYERFLLPFENHERRNGLSYKLNGKIDCEPQTIATIDVTDSPLRDDDVKILRTPSPKPENLEKLEKYDKLEKFEKLEKHEKGSIDSETGEITSKDELIVKNAEELNREFLESLNKDEKVSKISVKPVDQLVEPAKVKMYEKDDKDLQYLDTSKISLAESASPRAPPNGHTPNDLKSSRPAGRSSLRAVRVKPQRNQPPSSTPPGSASSTSSPPAPLTNFGIHHPPPPPLDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPWQPHPQVLGPPLMLNPAVQHQIMTQAQLFQMYNIMPQNYGNGLQPPKVIQASSIFGTAGPEKTVYGNPKDPFMPPPHVLHGAPLKPLRTAPTTPATPQDILDLTCKSTSPPPQKPTVEIVRVPNSPSPKLAPQNLSKNYTLVDGKAVVGSNLEITLVNKAQSPNKNRPPQKRSSNGKFMSTKTPTPPKDTYPKFTSPSHSNIQKKPPITIPSYQIREDTSLQNAMKNQNLAQIMDLQKHQNLAQIMDLQKSQNYGQIMDLQKHQNIGQMLELQKSQQLAQLVEMQAGAGEAQALYRLALAGAPHARQLALYRELLAAQLHHTPTTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -