Basic Information

Insect: Plodia interpunctella
Gene Symbol: zld
Assembly: GCA_027563975.2
Location: CM050493.2:3938351-3941551[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.019 1.1 10.1 0.4 1 23 16 38 16 38 0.97

2 7 0.22 13 6.8 2.3 2 23 198 220 197 220 0.89

3 7 0.0038 0.22 12.3 2.9 1 23 445 469 445 469 0.92

4 7 0.017 0.99 10.3 6.8 1 23 926 949 926 949 0.97

5 7 0.00083 0.048 14.4 1.0 1 23 955 977 955 977 0.98

6 7 2.3e-06 0.00013 22.4 6.5 1 23 983 1005 983 1005 0.98

7 7 9.9e-05 0.0057 17.3 3.3 1 23 1011 1033 1011 1033 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.019	1.1	10.1	0.4	1	23	16	38	16	38	0.97
2	7	0.22	13	6.8	2.3	2	23	198	220	197	220	0.89
3	7	0.0038	0.22	12.3	2.9	1	23	445	469	445	469	0.92
4	7	0.017	0.99	10.3	6.8	1	23	926	949	926	949	0.97
5	7	0.00083	0.048	14.4	1.0	1	23	955	977	955	977	0.98
6	7	2.3e-06	0.00013	22.4	6.5	1	23	983	1005	983	1005	0.98
7	7	9.9e-05	0.0057	17.3	3.3	1	23	1011	1033	1011	1033	0.96

Sequence Information

Coding Sequence: ATGGCTAACAGCAACGCCGTATCGTCGACCTTGCCGTCAAGGGATTATCATTGTAAGATTTGCGGCCTCTACTTGGACTCTGTGGACTCATTAGAGGTACATTTACAATatcataaagaaaatttatacgTTAAGTGGGGCACGCAAAACTCGCAGAATgatactgaaaataataacggaACTAAAGTGAAGAACGAGACGACACTGTCGGCGCCGGCCGACTCTAGCGACAACATGATCACCAAGCCCAGTCCGGAGTTCCAGCAGCGCGCCACCCCGGAGACCTCCACGCAGTTCCAGCACCCCGCCACGCCGCAGAGCTACCACAGCGCTCCTTCGCCGTACCAGAATCCCGACCAAACTAACTTCTCGCCGGGTGCACAATTCGGTAACAATTATTCTCATTCTGGCTTTCCACAAAATCAGCACTCTGAACAAATAAACTGGGAGCAATCTCAATACAACCAAGAATATCATAAAACTGCTCGCTTCCATCCTTATAATATGCAAGAACGCGTTCCACGCGTAACTTCTTCGAGCCCTTTGTATGGCCAACCTCTAAACCAGCCGACACCGTCGCCGTCTCCCAACCAATGCGACAAGTGTGGCTTTGTGTGCGATTCCGCCGTCCAACTCAATGAGCACTGTAACTCTGCCCATGCCGGGTCTAGCACGACGCCCACTACTGGCTCCATGCCATTTCAACAATTCCCACCGAAGCAGTATAACAACTCAGGTTACCAGAATGAAAATGCCAAAATTAAAGAAGAGCATGAAGAGTCATCGGACATATTAGACCTAGATTCCCAAAAAGTAGTTTACCAAGGAAATGAAGGCGAAGGTCAAACAACGCCCTATGAAGACGCACCACCCCAAAATCGAGAAGTCAACACACGAACTGTACCCATAATGCCCTGGGAAACACAAAAGTTATATAGTAATCCTCAACTTAATGGCGATGTATCTCTTTTCAAAgatcaaaaaatgtttactgaACAAAAAGGGGTATATCAAACAGACACAAAGATGTTTCATCCAGATCAAAAGTTTGCTTATAGCCAAGAGAAGTTCCTGACTGGTCATCAAGACCAAAAACCATTTATGCATATtgatcaaaaaatatacccTGGTGTACAAATGCCTCCTTTAACAGACTATTCAGGGCTAACCCCTTCGAATCCGGATATGAAACCTCCTTACCGTCCGTACGATTCTCCGTCGGCACCACAGATAACTAGCACACAACCGGCGAATCCAACATCCTCGACAATGCCCTCTATTGGCGGTAAGGGAGCAAACTGGAAGTCTAATGAAGCGCGGCGGCCAAAAACGTATAATTGCACAGCATGCAACAAATGGTTTACGAGTTCCGGGCATCTAAAGCGGCACTACAATACGACGTTGCATAAAAATGCCGTGAGGTCTTCGGGACAGCCGGACCCAGCCACCATGCCGATCTCCAGTCATCACCACCCGAGTCGAGATGCAATCCAGAATCGCGCACAACAACAAGCGGCTGACTCCAATACGCAGAGCCCCGTGCCCTCTGAGGACGGCCGCAGCGTAGACGACGTGTCTCTCCAGTCGCCCTACGTGTCGCAGAACTTCGACCGATCGCATCGTGTTGCCGCCATGCAGTCCAAGTCACCGTACACACATCTTCAACAGGgtaatttagataataatttcAGTAATAATCCTTTAGCTAATCACCCTTTACAGCACCAAGTCGGATCGCATCCGCTCAACATAGGTAGTAGTCAGCCGCCAGGCATAGGAAATCCTAATGATAATAATCATCAAGGGTCAAAGGGCGCTGCAGTATCCTCTACTGGGAATCCCCCAAACGGGGAAGCAGGTCCCTCTGTTTCTCAAAATCACCATATGAGGGGCCTGCTATCAGTCTCAACCAGCAATATTTCAACTCCAGCTCTAACTCAGAGTACGCCGGCGCTTACGGCTCACACCCTGCCCCCGTTCAGTCATTTGGGTGTCAACCCGTACAGCCCGAGGTCTACGGATCCTTTGGGGCCTTCGGTTCCGGACCCCACGCACACCCCATTATATTTGGGTCAGAATTTTCAGCAGACTATAGCACCGAATTACCCAAACGGGATGGCCCCCCACGTTATGGATATGGCTATCAACAATCTGCCTATAGCCAGTCCGGCTACTTTTGGTGAATCCGCACCTGAAGAAGTCGAAGTTATGGAACAGGAAACGTCGAATCAACCTGCCGGCGGACGCTTGCCTAGTTTCGCGCAGCTCCAAACGCAGAGTTTCAGCGTTTATGTTTCAAACTATATAACACAGCCTAACGTGGGGGGTCAAATTGTCGGTGACGAGTCCACCGCCGGATACATTATCGTCGACCCAGTTCACTCTCCTTTACCATATAATAATCTAGAATTTGGCGGGCAATCAGTGGATTACGATTACAGCTTTTCGCCTAGACCTGTCAAACAGGAAAATGTCGTAACTTACAGCCCCGAGCACGTCAAAGTTTTCCCTTACGGTTACGCGGTCGGGGGAAAGACGATCAAACGAGAAGACGATATTTTGAGAACTGACTCTAGCCaacttcaaattttgaaaatcgagGATATAATGGATTACGCGAATAAAGAGAACTATGGTAGTCAGATGAAGTCTCCCGCTAGTCCGGAGAGCGCAAAAGCGGAGAACGAGAGCCGTGGCTCGCCGGCCGTGTCGTCCACTGTCAGCACGCCGCTGGCCGAGCGCAACCAACTCAAGAAGCCCGCACCCGTCACCGTGCACAAGTGCTACGAGTGCGACAAAATCTTCAATAAGGCTTGTTATCTCACGCAGCATAACAAGACCTTCCATTCGGGCGCTAAGCCCTTCAAATGTGACCGTTGTGGCAAGCGTTTCTCGGATGATGTCTCGTACGAAGGACATTATCTTAAACATACCGACAATAAGCCGTTCAAATGCAACGAGTGTCCCAAGTCTTTCAATCACAAGACAGATCTGCGCAGGCACATGTGTCTTCACTCGGGTTGCAAACCGTTCGCTTGTGACCACTGCGGGAAAGGGTTTATTAGAAAAGACCACATGGTCAAACATTTTGATACGCACATGAAGAAAAATATGCGTTCTTCGTCGTCGTCGATGTCGTCGGCGTCGTCCGTGACGTCGACGACATCGCCCCCCTCTTCGTTACCGTACGTTCTCAATTAA
Protein Sequence: MANSNAVSSTLPSRDYHCKICGLYLDSVDSLEVHLQYHKENLYVKWGTQNSQNDTENNNGTKVKNETTLSAPADSSDNMITKPSPEFQQRATPETSTQFQHPATPQSYHSAPSPYQNPDQTNFSPGAQFGNNYSHSGFPQNQHSEQINWEQSQYNQEYHKTARFHPYNMQERVPRVTSSSPLYGQPLNQPTPSPSPNQCDKCGFVCDSAVQLNEHCNSAHAGSSTTPTTGSMPFQQFPPKQYNNSGYQNENAKIKEEHEESSDILDLDSQKVVYQGNEGEGQTTPYEDAPPQNREVNTRTVPIMPWETQKLYSNPQLNGDVSLFKDQKMFTEQKGVYQTDTKMFHPDQKFAYSQEKFLTGHQDQKPFMHIDQKIYPGVQMPPLTDYSGLTPSNPDMKPPYRPYDSPSAPQITSTQPANPTSSTMPSIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQAADSNTQSPVPSEDGRSVDDVSLQSPYVSQNFDRSHRVAAMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPLNIGSSQPPGIGNPNDNNHQGSKGAAVSSTGNPPNGEAGPSVSQNHHMRGLLSVSTSNISTPALTQSTPALTAHTLPPFSHLGVNPYSPRSTDPLGPSVPDPTHTPLYLGQNFQQTIAPNYPNGMAPHVMDMAINNLPIASPATFGESAPEEVEVMEQETSNQPAGGRLPSFAQLQTQSFSVYVSNYITQPNVGGQIVGDESTAGYIIVDPVHSPLPYNNLEFGGQSVDYDYSFSPRPVKQENVVTYSPEHVKVFPYGYAVGGKTIKREDDILRTDSSQLQILKIEDIMDYANKENYGSQMKSPASPESAKAENESRGSPAVSSTVSTPLAERNQLKKPAPVTVHKCYECDKIFNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYLKHTDNKPFKCNECPKSFNHKTDLRRHMCLHSGCKPFACDHCGKGFIRKDHMVKHFDTHMKKNMRSSSSSMSSASSVTSTTSPPSSLPYVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00204677;
90% Identity: iTF_00652200;
80% Identity: -