Basic Information

Insect: Plodia interpunctella
Gene Symbol: Zfa
Assembly: GCA_027563975.2
Location: CM050465.1:8284344-8292862[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0064 0.37 11.6 0.8 2 23 622 644 621 644 0.95

2 23 0.05 2.9 8.8 0.6 1 22 1024 1045 1024 1045 0.95

3 23 7.5 4.4e+02 1.9 0.3 1 22 1087 1108 1087 1110 0.82

4 23 0.0074 0.43 11.4 1.4 3 21 1121 1139 1119 1140 0.94

5 23 0.2 12 6.9 0.2 2 23 1148 1170 1147 1170 0.91

6 23 0.046 2.7 8.9 0.1 3 23 1191 1212 1189 1212 0.96

7 23 0.00012 0.0068 17.1 1.9 1 23 1218 1241 1218 1241 0.96

8 23 0.14 8.2 7.4 0.0 1 23 1263 1286 1263 1286 0.90

9 23 0.0062 0.36 11.7 3.5 1 23 1291 1313 1291 1313 0.97

10 23 0.0026 0.15 12.8 0.2 1 23 1319 1342 1319 1342 0.95

11 23 0.0026 0.15 12.8 1.3 1 23 1358 1380 1358 1380 0.97

12 23 0.0002 0.012 16.3 1.8 1 23 1428 1451 1428 1451 0.97

13 23 0.00087 0.05 14.3 1.7 1 23 1512 1535 1512 1535 0.96

14 23 0.0012 0.072 13.8 2.1 2 23 1562 1584 1561 1584 0.95

15 23 0.098 5.7 7.9 0.1 2 23 1590 1612 1589 1612 0.93

16 23 0.011 0.64 10.8 0.2 1 21 1656 1676 1656 1677 0.95

17 23 0.0014 0.08 13.7 0.6 1 23 1687 1709 1687 1709 0.93

18 23 0.00027 0.016 15.9 0.4 2 23 1801 1823 1801 1823 0.93

19 23 2e-07 1.2e-05 25.8 1.1 3 23 1830 1850 1829 1850 0.98

20 23 0.015 0.85 10.5 0.2 2 23 1868 1889 1867 1890 0.92

21 23 0.21 12 6.9 0.0 1 23 1912 1934 1912 1934 0.97

22 23 0.033 1.9 9.4 0.6 1 23 1940 1963 1940 1963 0.95

23 23 0.00016 0.0095 16.6 0.5 1 23 1971 1994 1971 1994 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0064	0.37	11.6	0.8	2	23	622	644	621	644	0.95
2	23	0.05	2.9	8.8	0.6	1	22	1024	1045	1024	1045	0.95
3	23	7.5	4.4e+02	1.9	0.3	1	22	1087	1108	1087	1110	0.82
4	23	0.0074	0.43	11.4	1.4	3	21	1121	1139	1119	1140	0.94
5	23	0.2	12	6.9	0.2	2	23	1148	1170	1147	1170	0.91
6	23	0.046	2.7	8.9	0.1	3	23	1191	1212	1189	1212	0.96
7	23	0.00012	0.0068	17.1	1.9	1	23	1218	1241	1218	1241	0.96
8	23	0.14	8.2	7.4	0.0	1	23	1263	1286	1263	1286	0.90
9	23	0.0062	0.36	11.7	3.5	1	23	1291	1313	1291	1313	0.97
10	23	0.0026	0.15	12.8	0.2	1	23	1319	1342	1319	1342	0.95
11	23	0.0026	0.15	12.8	1.3	1	23	1358	1380	1358	1380	0.97
12	23	0.0002	0.012	16.3	1.8	1	23	1428	1451	1428	1451	0.97
13	23	0.00087	0.05	14.3	1.7	1	23	1512	1535	1512	1535	0.96
14	23	0.0012	0.072	13.8	2.1	2	23	1562	1584	1561	1584	0.95
15	23	0.098	5.7	7.9	0.1	2	23	1590	1612	1589	1612	0.93
16	23	0.011	0.64	10.8	0.2	1	21	1656	1676	1656	1677	0.95
17	23	0.0014	0.08	13.7	0.6	1	23	1687	1709	1687	1709	0.93
18	23	0.00027	0.016	15.9	0.4	2	23	1801	1823	1801	1823	0.93
19	23	2e-07	1.2e-05	25.8	1.1	3	23	1830	1850	1829	1850	0.98
20	23	0.015	0.85	10.5	0.2	2	23	1868	1889	1867	1890	0.92
21	23	0.21	12	6.9	0.0	1	23	1912	1934	1912	1934	0.97
22	23	0.033	1.9	9.4	0.6	1	23	1940	1963	1940	1963	0.95
23	23	0.00016	0.0095	16.6	0.5	1	23	1971	1994	1971	1994	0.97

Sequence Information

Coding Sequence: atgaGTGTGAATTATGATAGTGTTTGTAGACTGTGCTTGTCATCCCGAGACGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTTGCGAGGAAAATCAAGGATTGCGTCTCTGTACAGataagCAAAAATGATGAGCTGCCAACTAATGTCTGCAGGAAATGCATGAACAATGTGAATAACTGGCACATATTTAAGTCAGTATGTGAAAGGACACAAAACAAACTAGAATCTCTGATAAAAAAAGATGGCAACCAACTAGAAGAGgtgaaaattaaaagtgaACCGTTTTCTGATGAGGCTTATGAAGATGGAGTGGTTATTGATGGGTCATACCCTGATAGTGAGAATGTTGGAGGCTCTAGTAAAATACAACCGGAAGGCCCACCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATATATAGATCCTCGAATGGACTGGAGTCGGGTACATGCAATCTTGGACTTAGTGCAAGAGGATGATGTCATAGATTCTTTGCAGAACACCGAAGAAAGTGATATATTGCATCACTCTGATCACGATTCTGACTCAGAGCTTGACCTTTTGAAACCCTCTGACATTGCTGATATTTATGTTGACTGCAAATCTGGATATGTCTGTAAAGATGAGGAGCTTCTTTCTAAAACACCAAGATATTCCCTAACAAATAGATTGAACAAAATGAAAGAGGTCCATATAATGAGGAAAAGAAAACTGGAAAAGGCATCGTTCTGCCCTCAGCCAAAGTCAGCATGGCAAAAATTTTTCTCAGATGATTTATTGGAGCTTATTGTTACATCAACTAATTATGCAATAGAAAAACGTGGACATAGTATTTCATTGTGTACAAatataagtgaaataaaaactatgatTGGTCTATTGTACCTTCATGGTATACTGAGACCAACTCAACAGAAATTTGATGATCTTTGGAGCAGTGATTGTGGAGTTCCATGTATTAGAGCtgctataaaatatgacaGAGTTAAATTTCTCCTTCAAAACTTATGCTTTGATAAAGATGCAGATGATGATATAATGCAATTTGATATAATGAGGCGCATGAGGAAAGTGTTCGaaatatttgcaatgaattgcAGGACAGCATTCAGTACATATGGGAATTCTGTAGTTATTGATGAGATCCTTGTACCAGTTTATGGACCTTGCCCATTCAGATATAACATTGATAAGAAACCATTAAAGAACGGAATAAAGCTGGTTTTATTAGTGGACCCCTTGACATTTTATGTCAATAATTTAGATGTTATTACTGATCCTTATTTTGAATCTTTGGAGATTGTGAAAAAACTGGTTCAACACTTAGCTGGCACTGGCAAGACCATAATTATGGATAGCTGGTTTATGTCTTTGcctttgattaattatttgaagaaTGAATATGAGTTATTTACTCTGGCAGGTGTCAATCCCAAAGACGATATGATACCACCTTTGTTTTTATCAGAATACAGAAAAAATCAGAAAGTATTGACTGGATTTAGAGAAGATGATTTAATACTCACTTCTTTTGTCACTATGGAATCTAAGTCAATAAATGTTGTTAGTAATGAGCCTCAGTATAACAGAAAAGGTCACACAAAACTCACAAGTGCAACATCTACATATTTGAAGTCCCAATCGGCTGTGGAAgGAATGGAAAGCGACAAAGAGGAGGAGGAAGAAGACGAAGAGATGAACGAGTCCTCCCAGTCGTTCTCCACGGTGCCAGCGCCGGCAATTCCGGAGGTGTCGATCACTGTGATGCGGCCGTCGGGCGAGACTCTGCCGGCGCGGCAAGGCATCCAGGCGCTGGCGTCCAAGGAGTGCCTGGTCTGCGGCCGCGCCTACCGCTACTCGCACAACGCCCGCCGCCACGAGCTCACCGCCCACAGCTTCGACAGGTACACCAACAAGGTCTCCCATAAGAAGAAGCCCTTCTCCCACATGCAACCTAAACTTAGACCCAATCCGTTCAACCCTAAAGCGCGCCTGATGCCCAGCCACAAGATGCATCTGATACCCAAACCGGTCCCTAAGTTGATGCCGGTCAGAAATGCCAACCCCCCGAAACCGGTTCTGATCAAGAAGGGCCCGCAGAACAATTTGCCCTATCCCCTCCGCATCAAAGCCTTGAAAGATttgcaaataaagaaaaaggaaCCCCAGATGCTGAAGACTTTGCTCACGTCGAAACCCGAGATTTTGACTTCCGAGATTGACATAGCTAATTCTGAACCGGAGAGTCCTGAAACTCTGGTATCTGAGCCCGAAATAGCTTCATTCCAAGTTGAGACTATACTATCGGAACCCGATGCTTTTGACCAGCCGCAAGGCGAGGAAGATGGAGAAGGAGAGGTCGAAGGCAATAATCAAAACCAGAATTATGACACTGTCGACATGGATTCAGAAAATGAAATCGAAATAGCTCGACAACAAGATAATGAACCGGAGGAGGATGATCATAATCCTGATAATGACAACGAAGATAACCTAAATCAAGATGAGGAGCACAATGCAGATGAAGCCCACAGTGAGACAGAAAAAGAGCAAAATGAAGAGAATTTAGAGCAGGATGAAATTATggataaagaaaattttgaaaataaagctGAAATTGagggagatattaaagaaatggATGAAGAGGAAGATAGGGAACATGACGACCAAGAGGTAAATCATGATGAAAATGAAGAAGATGATGATATGCCTCCCATGGCGCCAGTTGTCGAGATAAATGAGGACATGCAAACAAATTCATACAATAGCGAGAtgaatgaagaagaagaagaacttGATGAAACTGCCGATGATACTGCAGATCTCAATGAAACTGAAGAAGAACCGGTCAAAGAGTTAGACCCTGATAAAGTATATGTGACCAAAACTCAAAGAGATTTCATAGTCAAATACAGGGACATAATTCAACAAATCAACACAAAAGTATGTCTCTGCTGCGATCGGGAGCATCCTCGCCGAAAGGCAGTCATACAACATTTGCAGAAAAATGGACATAAGGTCCCAAAACATACATGTTACAATTGTGTGGTCACATTTTCACACATTGGTGCATTACTGAGTCACATGAGATCAAATACTTGCACAGATTTGTGGAAGATCATTTACAATGAAAACGGCATCACGGACGATATAGTAATCGATGACGAACCTAAGGAAGCCAAAGTacaatataaagatattttcaaCGCTAGGTCTTATGCTTGCAAATTGTGCCCTGCTAAATTCCAACTCAAACAGTTTATTATGAAACACGTGTTGGATGTCCATGAAGATGGACAATCAAGAGTTCCAATGATTTGTGTCCATTGTCGAACAAGATTTAAGGACAAGAGTTTAATCAAGAAACATATACGTAATGGTGACTGCACAGTATACATATCTTGCGACTTATGTTCAGAAAAGTTTTCAAATATGCAGACTTTCAACGACCACGCGATGGCCGTGCATGCCGGCAACTTCGACCAGGCTGACAACCCGAGCAAATGTGTCGATGGCCGCCCGACCGATTGTCCCATTTGCGGGAAAAAGAACAGCGGTTATCCTAACCTGgtgaaacatttgaaaattatacacaATGAAGAAAAACCGCATTACTGCACACACTGCGATGAAAGATTCGAACAAGCTGCTGATCTTAATCAACATATTTACACTGTCCATTCTGACAGAGGCATGACCGAGCCTGACATGTCACTTGTGAAGGAAGAAGCTGAAGAATATCATTATTCCTGTACAGAATGCAACGCTATATTTGAGACGGTCGACGCGTGGACTGACCACCAGGTGGCCGAGCATAACCAAGTGGCTCACCATTGTGATCAGTGTGACAAGAAGTTCTTGCGACCATCAGAACTTGCTGAGCATAAAAATACTCATTTGCGCGTGAAGTTCTATCCATGCAATATATGCAGCAATTCATACAGTACTCCTCAAAAGCTGACGGAACATGTCCAACAAGCCCACCCCGGTGCTGGGTCCGGAGGAGGATCGCAGACCACAGATAATGAATTCTTCTGCGACATTTGTATAAGGTCCTTCAAGAGTCGCCAAGCTTACTCCAACCATATGCGTATTCATTCTCGGGTGCCCACCCCTAACAGGAAACCTGGCGACCCTAAAGGTTTCTCCCCTCAAATTATAGGGAAACCCATCAAACAGTTCCCATCTATTCAAGCTAACTTTGTTTACAAGCCAAATTGCAATGTTCCTAATGCTCCTTACTCGTGTGATATTTGTGGCAAAGGCTTTATGCACAAGAAGAATATATGGAAACATAAGAAGGTGTTACATGCAGATATACTCAATGATAGGAATGACAGTGAAGAAAATACAATGCAAGCTTCTACTGAGGAGGATGAATACAACGTAGACGAAAATGGTGCTTTGTTGTCGACTCCGCAATTTAACAGTTTTAACTTCGCCAACTTCGCTAACAATGTACAGCAGACGCCTCAGGAGGATCAGTTGCTTTACACCTGCGAGCTCTGCTTCAAGCGATTCCCGCTTAGGTCTAGTTTGTGGAAACACAAACGCGCTAAACATGGAATCATCAACGCGAGTGCGGGCGGGGAGGTTGCGACGCCGTCCTCGGCCGGACCGTCTGAAGGCAGCAGCAGGTCCAGTTGcactatttgtaaaataacattcTCCGACAAGAAGTCTTATTATCGTCATAGAAAGAACGTGCACAAGACTGCTACACAAATGTGTAAAATATGTGGCAAACCATTGAATTCGACATTGGAACTATATGAACATTTGAAAGCTGCTCACGCTCGTGAATTGTTAGGTTACAATGCCAGTCAGGGATCTAGTACTAAGCAGGAAATGAAACAGGAATTAGAAGTAGATTATGAGAATGATCAAGATTCGATAGACCCGACGGTGGATTATCAGGCGCGTTATCCGTGCGACACGTGCGGCAAGCAATTCGTCGGATTGTTGGCGTTACAAAACCACCAGTGTATAAATCAAGTCCAATCGCAGCCGCAGACTTTCGATTGTGAGATTTGCCACAAGAGTTACACCTCGATCGCCGCACTAAAGAGCCACCGCGGCTGGCACTTGCGTTCTCCCGACGGCAAGGCGGCCGCCAACAACACCGGGCTGTGGATGCCGCAGAACAAGGTCACCAACAAGGTCAGCAAGCACGAGGTGGTGGACCCGGTGCAGCTGGCGCGGGTGCAGCATACCACTGTGTCGTcccccgccgccgccgtcgCGGCCAAGCGGAGGCTGCCGCCGGAAGTCGAGGTCACCGTCGTCAATCCCAATAAAAAATTGCGCTCCGACGACTCCATCGATTTGGAACAACAGACCGGCTCGATGGAAGACAGATATTGCACGCTCTGCGACAAGGAGTTCACGAAGCGGGCGGCGTACCAGCGCCACATGGAGGAGGTCCACATGCCGAACTCGGTGTTTTGTCCCGTCTGCGACAAGAGCTTCACTAGGAAGTCCACTTTGATCGTGCACATGAAGAAGCACTATGAGGGCGGGCAGGGCAGCTCCAGCGGCACCCAGATGGAGGAGGATTGCGCGTGCGAAGTGTGCGGCGTGCAGTTCGAGAGCGAGGCGGCGCTGCGGGCGCACGCGGCGCGGCACCACGGGGAGGAGGAGTCTGAGGAGTCGGAGGAGGAGGGAGGCGCGGCGCCGCTGCAGCCGGGGGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCGACGCCGCGCGACCTCATCGCGCACCGCACGATGCACGCGACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGTGCGGGCGCTGGACCTGTCGTCGCACACGCGCGCGCGGCACGCGGACAACGAGAAAGTGTTTTTCCCCTGCGCCATGTGCGACCGCTTCTACATGAACAAGAAGAGCTTGCAGCGGCACATCGAGACCGCTCATTGA
Protein Sequence: MSVNYDSVCRLCLSSRDELLPIFPTTSSDDSEPPVLARKIKDCVSVQISKNDELPTNVCRKCMNNVNNWHIFKSVCERTQNKLESLIKKDGNQLEEVKIKSEPFSDEAYEDGVVIDGSYPDSENVGGSSKIQPEGPPILASLGLTPRSDKKYIDPRMDWSRVHAILDLVQEDDVIDSLQNTEESDILHHSDHDSDSELDLLKPSDIADIYVDCKSGYVCKDEELLSKTPRYSLTNRLNKMKEVHIMRKRKLEKASFCPQPKSAWQKFFSDDLLELIVTSTNYAIEKRGHSISLCTNISEIKTMIGLLYLHGILRPTQQKFDDLWSSDCGVPCIRAAIKYDRVKFLLQNLCFDKDADDDIMQFDIMRRMRKVFEIFAMNCRTAFSTYGNSVVIDEILVPVYGPCPFRYNIDKKPLKNGIKLVLLVDPLTFYVNNLDVITDPYFESLEIVKKLVQHLAGTGKTIIMDSWFMSLPLINYLKNEYELFTLAGVNPKDDMIPPLFLSEYRKNQKVLTGFREDDLILTSFVTMESKSINVVSNEPQYNRKGHTKLTSATSTYLKSQSAVEGMESDKEEEEEDEEMNESSQSFSTVPAPAIPEVSITVMRPSGETLPARQGIQALASKECLVCGRAYRYSHNARRHELTAHSFDRYTNKVSHKKKPFSHMQPKLRPNPFNPKARLMPSHKMHLIPKPVPKLMPVRNANPPKPVLIKKGPQNNLPYPLRIKALKDLQIKKKEPQMLKTLLTSKPEILTSEIDIANSEPESPETLVSEPEIASFQVETILSEPDAFDQPQGEEDGEGEVEGNNQNQNYDTVDMDSENEIEIARQQDNEPEEDDHNPDNDNEDNLNQDEEHNADEAHSETEKEQNEENLEQDEIMDKENFENKAEIEGDIKEMDEEEDREHDDQEVNHDENEEDDDMPPMAPVVEINEDMQTNSYNSEMNEEEEELDETADDTADLNETEEEPVKELDPDKVYVTKTQRDFIVKYRDIIQQINTKVCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRSNTCTDLWKIIYNENGITDDIVIDDEPKEAKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMICVHCRTRFKDKSLIKKHIRNGDCTVYISCDLCSEKFSNMQTFNDHAMAVHAGNFDQADNPSKCVDGRPTDCPICGKKNSGYPNLVKHLKIIHNEEKPHYCTHCDERFEQAADLNQHIYTVHSDRGMTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLTEHVQQAHPGAGSGGGSQTTDNEFFCDICIRSFKSRQAYSNHMRIHSRVPTPNRKPGDPKGFSPQIIGKPIKQFPSIQANFVYKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEDEYNVDENGALLSTPQFNSFNFANFANNVQQTPQEDQLLYTCELCFKRFPLRSSLWKHKRAKHGIINASAGGEVATPSSAGPSEGSSRSSCTICKITFSDKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGSSTKQEMKQELEVDYENDQDSIDPTVDYQARYPCDTCGKQFVGLLALQNHQCINQVQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTNKVSKHEVVDPVQLARVQHTTVSSPAAAVAAKRRLPPEVEVTVVNPNKKLRSDDSIDLEQQTGSMEDRYCTLCDKEFTKRAAYQRHMEEVHMPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGQGSSSGTQMEEDCACEVCGVQFESEAALRAHAARHHGEEESEESEEEGGAAPLQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIETAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00012228;
90% Identity: -
80% Identity: -