Pint008845.3
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- RCOR3
- Assembly
- GCA_027563975.2
- Location
- CM050474.1:8590531-8598644[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 1.2e-06 28.7 0.0 3 46 132 175 130 175 0.97 2 2 5.1e-11 5e-08 33.2 0.0 3 46 402 445 400 445 0.96
Sequence Information
- Coding Sequence
- ATGGTATTGGCTGAAAGAAGTACCGATGTTCGGAACGGGAAGCGGTCGAGGGGGCCAAGCCCCAATGGTCATGGAAGTCCAGATTCAAGTTCAGAAGATGAAAATGTAGTGCCATTTGCAGCTGAGAAAATCAGAGTGGGTAGGGATTACCAAGCAGTTTGTCCTGAACTTGAGCCAGTTGATCAACGGAAACCGGAGCAAATATCAGATCGCGCATTATTAGTGTGGTCACCTACTGCAGATATCACTGACATGAAATtggatgaatatattacaactgcaaaagaaaaatatggatATAATGGGGAACAAGCACTTGGCATGTTATTTTGGCACAAACACGACCTCAACAGAGCATCTATGGATCTTGCTAACTTCACTCCCTTTCCTGATGAATGGACAGTTGAGGATAAGGTGTTATTTGAACAGGCTTTTCAGTTCCATGGCAAAAGCTTTCACAGAATAAGGCAAATGCTCCCTGATAAATCCATAGCATCACTAGTCAAATATTACTATTCATGGAAGAAAACACGAGCGCGCACATCCCTCATGGATGTTGTAGGTGAAGGCCGAAATGCTACCAGCTCCGGCACTGGTAAACGGGAATCTGGAGCAGGGTCTGAGCCAGGAGGTTCAGATAAAGAGTCTGATAACGACGAGAAGAAGTGGACTTACCACCGTGGTATAGTGCGTGGCGGGAAGGGCCAGCCGGCGGGCGGGAGCTCGCTTCGCGCGTCCGGATCCGGGCCGCAGGGCGAGGCGAGTGCCGAAGGCGCCGGCAAGAGTTGCACCGTGTGCGGCATTCTGTGCTCTCACATCACGCCGCACAACTCGCACAAGTTGTGTCAGGCTTGCCTCGTGCATGCCAGACGCACGGGCACGATGCGGCCGCTGTGCGGGCCTTCGGGGCGGCGCGGGCCGGGCTCCAAACAGCAGCGGTACAAACACCGTTTGCCGCGCGGCATTTACATCAATCACGACGATCTGGTCGCCATGGCCACCGGGCCCCAGCCCGGCGACGCCCCGGTGGCAGGCCTCGTCAATCAGGGCGACGCCATGCTTAAAGCGATGGACAGGGAAATTATATCGCTAAAGAGACAAGTACAGCAGAATAAGCAACAATTAAGCGCAATGAAACGCAAGGTGGGAGACGCGGGAGTTGAGGAGTTGAGGCCTGGAGAACCACCGGCAAAGATAAATTCTCGTTGGACAAATGATGAACTCCTAATGGCCGTCACAGCAGTCAGGAAATATGGTCGCGACTTCCAAGCGATCGCAGAGACGCTAGGCACGAAAACAGAGGCGCACGTCCGCACGTTCTTCGTGTCGTACCGACGTCGTTACAACTTGGACGCGGTTCTGCGTGAACACGAGGCTGATGAGTCGGCGCGCGTCAATAATCCACAAATAAACCGCACAGGTGCAACGAGCACAGAATCAACAGACACAGCCAACGACAACACTAACGCTAACAACGGGACAGCGTCGCCGCCGTCCACCAATAAAGATGAGAAAATGGAAGTGGACAGCGAGGGCGTAGCTATCGGCGCGTCGGCGGAGCAGGGCGGCCCGCCCACCACGCCGCCCAAACACAAGTCCAGCAAGTGA
- Protein Sequence
- MVLAERSTDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVDQRKPEQISDRALLVWSPTADITDMKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVGEGRNATSSGTGKRESGAGSEPGGSDKESDNDEKKWTYHRGIVRGGKGQPAGGSSLRASGSGPQGEASAEGAGKSCTVCGILCSHITPHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDAPVAGLVNQGDAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDAGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAIAETLGTKTEAHVRTFFVSYRRRYNLDAVLREHEADESARVNNPQINRTGATSTESTDTANDNTNANNGTASPPSTNKDEKMEVDSEGVAIGASAEQGGPPTTPPKHKSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_00720245;
- 80% Identity
- -