Pint015629.1
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_027563975.2
- Location
- CM050486.1:1994026-2026047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-14 2.4e-11 43.4 0.0 1 38 377 415 377 418 0.95 2 2 1.4e-18 1.3e-15 57.1 0.0 1 43 581 624 581 626 0.95
Sequence Information
- Coding Sequence
- ATGCTGCTAATAATTTCGACAAGAAGCAATCCCAAGAAGCGGTCCCTGGATTCCGATGCTTTAGGTCTCAGAATGCAACCTGAAAAACGATACAGTAGAAGAGGGAGACTAATAAAAGATGAATGGATCGCTTtagatatagGTCTAGAACGGGTGGCAGAGGAGTTGATGGGGCGAAGAAAATGGAAACTTTATCAAGACGCATTAATACCAAAGCGTGGCGACGCCCAATCCAGCGACGAAGACTCCATGCCTTCCACCGACCCCCCACCGGCTTTGAAAATCAAAACCATAGAGCAGATAAACGAGGACGAACGTCCAGAGAAACGGCCAGAGACAATTCTAGAAAGTTTGATCAAAAGGCCGGCGACCCAGCCGAAGGTAGAAGTAGACGAACCTACAGATTGGAAGCCACCAGATAAATGCTATTTCTGTGTGGATGGAGATGGGAAGGGTGAGAGAGACAAGGACaaggagagagagagagaagagaGGCCGGCAGGTGGAGCCAGTATATCAGCTACCTTCCCCGGGTTGAAAGGCGCGCCCGTGTCAAGCATGTCTTTGCCCAAGACGAGTCGTCCCGCTGCTCCGAGGAGAGCAGCCGAGCCAGAGACTCCCGTGGTAGCGGCCGCCGCGCCGGGGCTGTGGAGCGAGAGTAGCACATGGTCCCCGCACAAATGCGGTTGGCATCGGCACCGTGTCGTTTTAAGTCCAGCCTCGGAGTCGGACAGCAGCTCGGTGTCGGGCGCTAAGAGCCCGGCCGCGCCGCCGTTGCTTCACCATCTGTTGCAGATGCAACTGCAGGCGCAGACACCGCAGGCCATTGCACAGTTCCAGCAGATGGCGGCCGCGCTGGCGACGCTGGGCTCGGGGCTTATGCCGCCCGCGCTGACACAGCTCATGTTGCTGCAGCGGCTGGCGCACCGGCAGCAAGCGGACAGATTACCAGAGTCAGACAAGGCGCCGCCGCCATCATCCCCGACCCTGGCCGAGCAGCCCCTGGACCTGAGCGCCAAGTCTACCTCCAGCACGAGCGGCACCCCACCTCCCGACTCCAAGATCCTTGATAACAGGTTGAAGCGCACAGCCATCGAGAGTGCCGGCAACAGCCAACGTCGCACGTACACTGAAGACGAGCTACAGTCAGCTCTAAGGGACATCCAGTCCGGTCGGCTCGGCACAcggcgcgccgccgccgtctACGGCATACCCCGCTCCACCCTCCGCAACAAAGTCAACAAGTTCGGCCTCAACCCCGACCCCCACGACTCCGACCCCGACAGCGACCCCGAACGATCAGACTCCCCGCCATCGGTTATCCTCAAAATACCAACGTTCCCACCTCCGGACGAAAACAGCCCCTCTCCTGCCAGCGTCACCACTCCCGTCACACCGATCACTCCTATGATCCCCCCGCCGCAGCCCCCAGTCAACCCTCCCCCGCATCTGCCAGCCTTCTTCGCCGATCCACCAAACCAGCTCTTCACATCCATCAACGACGTCATAGTTAGGAGCATCAGCCAGAAATTTCAGCATCCTGACAGACCACCGCAGGCCAACGATTTGCAACACTTCATGCGAGCGCCGGAACGACACGTCTCCGTCATCAAAACACCTCCGGAAAACCAGAGGAACTACTCCGCTCCGAGCAATTCTAGAGCCCAGTCTAATAATAATGGCCAGCCTGCGACAGGCGGCAAGGGCACGCGACCTAAACGAGGGAAGTATAGAAATTACGACAGAGACAGCCTCGTCGAAGCAGTTAAGGCGGTCCAACGTGGCGAAATGTCCGTACATCGAGCCGGCTCATATTATGGCGTGCCTCATTCCACTCTGGAATACAAAGTTAAAGAGCGGCATCTCATGCGGCCGAGGAAACGAGAGCCGAAACCGCAGCAGGATATAAAGCCGCAGCCGCCAAAGCCTCAGCCTCCGAAGCCCCCTACGAAGCCCTTCTCCAACGGCCTAAATGGACCGGAGACGTCTGGGTACCCACCGAGCTACCCGTTCTGGCCAAACGCTGGCTTCCCACCGCCATCTCCCGATTTATACGCGTCGCATATGATGCGACGGCTGCGCGAAGAAGCCCCTCCGCCAGCAAACGGGTCGTTTCTAGAAGGTATCATCAGGTCGAGCCTCGAGCGGCCCCGCGCGGCGTTGCTGCAGCAGCTGACGGCGGAGCCGCGGCCGCCGATGCCGTCGGCTGAGGCGCCCAGCTTGCTGCGGCGACTGGCCGGCTCGCCCGCGGACGACGGGCCCCCAGCGCGCCGTCCTCGCATGGACAACGCGGACTTGGCGGCCGACATCCGCGACACGGTGCAGCGGCTGCGAGCGGACAAGCTGCGGCCGCGCAACGGCACGCCGACCCCGCCGGGCGCCGCGTCGCCGCCGCACGCGCCGCCGCTCGCCGCCCCGCCCGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MLLIISTRSNPKKRSLDSDALGLRMQPEKRYSRRGRLIKDEWIALDIGLERVAEELMGRRKWKLYQDALIPKRGDAQSSDEDSMPSTDPPPALKIKTIEQINEDERPEKRPETILESLIKRPATQPKVEVDEPTDWKPPDKCYFCVDGDGKGERDKDKEREREERPAGGASISATFPGLKGAPVSSMSLPKTSRPAAPRRAAEPETPVVAAAAPGLWSESSTWSPHKCGWHRHRVVLSPASESDSSSVSGAKSPAAPPLLHHLLQMQLQAQTPQAIAQFQQMAAALATLGSGLMPPALTQLMLLQRLAHRQQADRLPESDKAPPPSSPTLAEQPLDLSAKSTSSTSGTPPPDSKILDNRLKRTAIESAGNSQRRTYTEDELQSALRDIQSGRLGTRRAAAVYGIPRSTLRNKVNKFGLNPDPHDSDPDSDPERSDSPPSVILKIPTFPPPDENSPSPASVTTPVTPITPMIPPPQPPVNPPPHLPAFFADPPNQLFTSINDVIVRSISQKFQHPDRPPQANDLQHFMRAPERHVSVIKTPPENQRNYSAPSNSRAQSNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDIKPQPPKPQPPKPPTKPFSNGLNGPETSGYPPSYPFWPNAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPRAALLQQLTAEPRPPMPSAEAPSLLRRLAGSPADDGPPARRPRMDNADLAADIRDTVQRLRADKLRPRNGTPTPPGAASPPHAPPLAAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01124528;
- 90% Identity
- -
- 80% Identity
- -