Pint012465.1
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- retn
- Assembly
- GCA_027563975.2
- Location
- CM050480.1:3409694-3417992[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 2.2e-16 60.3 0.0 17 89 20 90 14 90 0.94 2 2 5.3 9.6e+03 -2.7 0.0 25 38 221 234 184 236 0.57
Sequence Information
- Coding Sequence
- ATGGGCGGCTTCGAGCTGCTCTCCGGCCTCTCTGATTGGTCGCTCGCAGGGTTGTGCGGCACTCCAATAAACCGGCTGCCGATCATGGCTAAGTCTGTGTTGGACTTGTACGAGCTGTACAACCTCGTGATCGCTAGAGGCGGCCTCGTCGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAAGGTCTTCGGCTTCCGTCGTCTATCACCTCCGCTGCATTTACTTTGAGGACACAgtATATGAAGTACCTCTATGACTACGAGTGTGAGAAGAAAAATCTGTCGACCCGTAGCGAGCTGGATGCGGCCATCGAAGGCAACAAGAGAGAAGGACGCAGAGCATCCGGACAGTATGACGCTCAGGCGGCTCTCGCTATGCCTCCACTAAGCCGCGGGGTACCTGCCTCGCTCGCACAACTGTCTCAACACATGCAGCCTCTCTCGCTCTCACTCGGCGGGGGAGTAGCGGGGGTGCCGCGGTTGCCTCCACTGCCCCCGCATGCCCCGCACATTTCCCAGCACGACATAGAGTACAGAGTCAGAGAGTACATGAAGATGATTCAGCAACAGAGGGAGCTTATGAGGAATGGCTCGGAGTCGCCCCCGGGGAACCCAGCCCCGATCATGTCCCCGCGCGATGCCGCCGCCCTCAGCGCTATCGACGTCTCGCGCTTGACGCTCTGGTCGCTCTACAAcaataacaacaacaacagTCCCCAGCCAGACCTGGAGCCACAACGCGAGGCCCTGAATCTGAGCGAGAGTCCAAACTCAAGCCTGAGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCCCCCGCCAAGCGGCGCACCCCGCGGCCGGCGTCGCCGCGCTCCCCGCACGCGCCCAGCGAGCGCAGCACGCCGGGCGTGCCGCGCGCCTGTCTGCCGCAGTCGCAGATCAATGGAACGCCGACCAACGGCGTCAATGGTGCCGCTTTTAAGATTACCACTAGAGGTGATGTGAGCACAGGCGACCAACAACTGGTGGTCTCAATAGAACTCAACGGAGTCACATACGAAGGAGTTCTTTTCCCTTCCCAAAACGGCAGTGGTCAGAATGGTCACAGGCAGATGGTCTCTTAA
- Protein Sequence
- MGGFELLSGLSDWSLAGLCGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGNPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSLSGKREACRSPPPPAKRRTPRPASPRSPHAPSERSTPGVPRACLPQSQINGTPTNGVNGAAFKITTRGDVSTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00007792;
- 80% Identity
- -