Prub012175.1
Basic Information
- Insect
- Plemyria rubiginata
- Gene Symbol
- Gata6
- Assembly
- GCA_963576535.1
- Location
- OY754918.1:3864074-3871946[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-17 6.2e-14 51.8 3.7 1 35 373 406 373 407 0.98
Sequence Information
- Coding Sequence
- ATGAAGAACCTGGAGAGCCGGCAGGCTGCGGTCACACTACTGCAGATCAAGAATTACGATCCCAACAAATATGCAGTCAAACCGGAGGAGGAGCCGCAAGTTATGTACAACAGCGGGCCGAGCTTACCGCCCGCTGACAGAGCGAGAGAGGTGATGCACTGCAATGCTGTCATCGATATTATAAGCAAGGCTGTGGCGGTGGCGCAGAGGGAGAACGAGGAAACACAGAAGTACCCTCCTAGCTACGAGAGCGTCATAGAGCGGACGCATGCTCCGGCGAGCGCGGCCACCGAAGCCAACTACCCGCCAGAATACCCCGAGGACAGATACACGTACGGAACAACGCAGACCGCCGCTAGTCCCTGCAGCAACGAAGACCATGACAAGGAGATGGATCTCTCACTGTACAGCAGCGTCAAGAACGAACCGAACGAACACACCGAACAGGACGAGCAGAACGCGTACTTCCACAGAACAATGGCACAAAACAACACAAACTTTGCAGAGGAATACAAGCAGCACATCTTCGGCAGAAACACAAACAAAACGAAAATGAGTAAAGACAACTCCTTAATTTACGAGGAGTGCAGTCGAAGCAGTAGCGGCTCCGACCCCGATAGATTGCAAATGGACATTTCTCAGATGTCGCAGGACGACCCTGAAGAGACGCAATCTGCGCGATCGAACCAGTCCTCGCCGCAGCCGCCGCCAGACGAACACGAGACAAAGGAATCCTTATGGCAGGCTCTTCACAGAAACAACGGCCGTAGCGGGGAAGCAACGCAACTGCTCCGGCGACTGATAAACAGCAAGCATCTCGGTATGACTGTCTCGCCTCTGCGTCCCGCCACGTCGCCGCTCCCCGCGCCTACATTGACGCCGACTCCACCGCCCAACGGCTCCATCTCACCGAACGGAAAATGGCAGCTAGTGGACCGCGGCGTCAACGTAGCGGGTACGGCGCGCAGGAAACAGAGCTTCCCGGCGCGTGCGCAGCCGGTGTCCGCCTCGGAGCCGGCCAATGCACAGTGGCCTCCTGTCTCGGAGAACCAAGATGCAACGGACGCGCaatccggcggcggcggcgctcggTCCGGGCCGCGCGTTGAGATCTCGTGCACCAACTGCGGCACTCACACCACCACCATCTGGCGGCGCGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGACTGTACTACAAGCTGCACGGCGTGCCGCGACCCACCGCCATGCGGCGCGACACCATTCacacgcgccgccgccggccgagGCACGACGCCAAGCATTCGCGGACCAAAAACCGTCGAAGCGGCGCGTGTCCGGAACCGATCGAGGCGCCGACATCCGGCACTGGGAATGGCGCGAGCGTGCAGCCCGCGTGCAGCGAGAATGCAGCGCCGGAGGAAGCTGTGTTAGCTGCACTACGCAGGCAGCTGCAGCCGCACTTGCTTGCCGCATTGCATGCGCATACCAGTCGCACGCATCGCCCACAGGGAGGTCTCAACGCCCCGGAATATGACGAGGCTCCACTAAACCTAGTGGCCAGTCATGTGGCTGCTGAAGAAACGCACTGA
- Protein Sequence
- MKNLESRQAAVTLLQIKNYDPNKYAVKPEEEPQVMYNSGPSLPPADRAREVMHCNAVIDIISKAVAVAQRENEETQKYPPSYESVIERTHAPASAATEANYPPEYPEDRYTYGTTQTAASPCSNEDHDKEMDLSLYSSVKNEPNEHTEQDEQNAYFHRTMAQNNTNFAEEYKQHIFGRNTNKTKMSKDNSLIYEECSRSSSGSDPDRLQMDISQMSQDDPEETQSARSNQSSPQPPPDEHETKESLWQALHRNNGRSGEATQLLRRLINSKHLGMTVSPLRPATSPLPAPTLTPTPPPNGSISPNGKWQLVDRGVNVAGTARRKQSFPARAQPVSASEPANAQWPPVSENQDATDAQSGGGGARSGPRVEISCTNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHSRTKNRRSGACPEPIEAPTSGTGNGASVQPACSENAAPEEAVLAALRRQLQPHLLAALHAHTSRTHRPQGGLNAPEYDEAPLNLVASHVAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377679;
- 90% Identity
- iTF_01429604; iTF_00639196;
- 80% Identity
- -