Prub003523.1
Basic Information
- Insect
- Plemyria rubiginata
- Gene Symbol
- GATA4
- Assembly
- GCA_963576535.1
- Location
- OY754908.1:120920-124721[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-16 3.3e-13 49.4 3.3 1 35 471 504 471 505 0.97 2 2 2.1e-17 6e-14 51.8 6.5 1 35 532 565 532 566 0.97
Sequence Information
- Coding Sequence
- ATGCATTTCACGCACTCCAGTAAGTGGAAGGCAGTACTATCATCGTCGTTTGTTACAGAGCTAATCATGGAAAAAGATCAACAACAGACGTGCCGTGAAGGCGAGGCGGAACCGGAGGAGGGGCCCAGCGCCGAGGCACTGCAGCTCGTCAAGAGCGAGGAGCGTCTGCAGGAGCCCGACGACCAGCAGCAGCAACTACAGcaccaacaacaacaacaactgCAGCACCAGCTGCAGCACCAGCAGCAGCAGATGcaccagcagcagcagcagcagatGCATCAGCAGCAGAGCGACATGCGTTGCGACGCGCCGCAGTCCATGTCGGTGATCACGCGCCGCGGCCGCACCATCACCGCCGCCGGACATATCACCGAGGACGAGCTCGCCGACGACGGCGTCAAGGACGAGCCGGCCGAGCCCGCGCCGCCGGCCGACGAGCAGCcagcgccccccgcgcccccgccgcccGCGCAGCTGCACTACGCGCTGAAGCTGGAGGAGGCGGCGCACTACGAGGAGGAGCGCCTGCGACTCTCCGAGGCGGAGGCGGCGCGCTACCTCGCCTTCAAGCAGGagccgcgcgcgcgcgccccgcCCCCCCGCGGACTCGCACTGCGCTACGGCGCGCCGCACCACGTGCTGCTgcagcaccagcaccagcaccagcagGACGCCGAGGACGGGCCGCAGTACTCCGCGCCGGGCCCCGCGCAGGGCGAGGGCGACGGCCGGCAGTACGCGGAGCAGGCGTCCGCGGCGCTCGAGATGATCCAGGCGACGGCGCTCGCCGACCAGCAGGCGGTCGGCGTCGCCTACCAGCCGGTCAAGTACGAGAGCCGCGCGGAAGCCGAGCCGCGCGCCGGCACCTACGCGAGCCTGCAGCCGGTGACGTCAGCGGCCGGCGGGTACGCGtacgccgcgcccgcgccgcactACGCCGGCGGATACCCCTACGCCGCCGGCGGCAAGGAGCTGCTGGCGCTGTACGGCGGCGCGGGGAgtgcggggggcgcgggggcaGAGCGGCGCGGGGACGAGTCGCCGCCCTCGCAGCTGCTGTACCGGTCGGACCCCACGCTGTCCTCGTCGTCGTCGCtgggcgggcgcggcgcgcacCTGGTGTACGGCTCCGTGGTGCCGCAGTCGCAGGCGGTGTACGACGCGCCGCCCAGCCCCAACTCGCAGCAGGTGACGCTGTACACCCACGGGAACACGGTGCAGTACAAGGTGGGCGGCGAACACTACCTGTCGTCGGGCGGCGGGGTGGAATACGTGCCGGTGTCCGCTTACGATGGGCTACTGGTGGAGGGCTACCCGGCGTCCAGCCAGCCCTGGCCCGCGCACAACTTGCTGCCGATCGATGATGGATTCGACCCCGGCATGGCGGCCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCCGCCGCGACGACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTCTACACGCGCATCAACGGCGTGAACCGGCCGCCGCTGAAGGGGCAGAAGGCCAAGCCGCAGCAGGCCCTGCCGACGAACGGCAGCCGGCGCGTGGGCGTCACCTGCGCCAACTGCCGCACCGCCAACACGACGCTCTGGCGGCGCAACAACAGCGGCGAGCCCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGCCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGCGGCGCGCAGCACAACGCGcggcccgcgcccgcgccgctctCCGCGGAGGGGCACGCCCACAAGGTGCTGCCCCCGCTGTACGCGGCGGTGGaggggggcggcggcggcgcggggggcgcggggggacCGCTGCTGCTGCAGCTGCCCGCGCGCCACCACCCCGACATGCTATCAGCGCTAGAGCGCGGAGGCAGCTCCCTGGGGCACTACCGCCCACCCTAA
- Protein Sequence
- MHFTHSSKWKAVLSSSFVTELIMEKDQQQTCREGEAEPEEGPSAEALQLVKSEERLQEPDDQQQQLQHQQQQQLQHQLQHQQQQMHQQQQQQMHQQQSDMRCDAPQSMSVITRRGRTITAAGHITEDELADDGVKDEPAEPAPPADEQPAPPAPPPPAQLHYALKLEEAAHYEEERLRLSEAEAARYLAFKQEPRARAPPPRGLALRYGAPHHVLLQHQHQHQQDAEDGPQYSAPGPAQGEGDGRQYAEQASAALEMIQATALADQQAVGVAYQPVKYESRAEAEPRAGTYASLQPVTSAAGGYAYAAPAPHYAGGYPYAAGGKELLALYGGAGSAGGAGAERRGDESPPSQLLYRSDPTLSSSSSLGGRGAHLVYGSVVPQSQAVYDAPPSPNSQQVTLYTHGNTVQYKVGGEHYLSSGGGVEYVPVSAYDGLLVEGYPASSQPWPAHNLLPIDDGFDPGMAAMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGSRRVGVTCANCRTANTTLWRRNNSGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGAQHNARPAPAPLSAEGHAHKVLPPLYAAVEGGGGGAGGAGGPLLLQLPARHHPDMLSALERGGSSLGHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01429602;
- 90% Identity
- -
- 80% Identity
- -