Basic Information

Insect: Plemyria rubiginata
Gene Symbol: ZNF784
Assembly: GCA_963576535.1
Location: OY754922.1:9086328-9102918[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.089 5.8 8.1 1.5 1 23 362 384 362 384 0.98

2 11 0.23 15 6.8 0.3 1 23 391 414 391 414 0.93

3 11 6.4 4.2e+02 2.2 0.3 1 23 418 440 418 440 0.84

4 11 0.01 0.68 11.0 1.5 1 23 445 468 445 468 0.98

5 11 0.0031 0.2 12.7 0.2 2 23 473 495 472 495 0.95

6 11 8.8 5.7e+02 1.8 0.1 2 21 508 527 508 528 0.85

7 11 0.19 12 7.0 0.2 2 23 583 605 582 605 0.96

8 11 0.019 1.2 10.2 0.1 3 20 622 639 621 642 0.92

9 11 1.6e-05 0.0011 19.8 0.7 1 23 648 670 648 670 0.97

10 11 0.00014 0.0091 16.9 3.2 1 23 677 699 677 699 0.97

11 11 0.0026 0.17 12.9 2.5 1 23 705 728 705 728 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.089	5.8	8.1	1.5	1	23	362	384	362	384	0.98
2	11	0.23	15	6.8	0.3	1	23	391	414	391	414	0.93
3	11	6.4	4.2e+02	2.2	0.3	1	23	418	440	418	440	0.84
4	11	0.01	0.68	11.0	1.5	1	23	445	468	445	468	0.98
5	11	0.0031	0.2	12.7	0.2	2	23	473	495	472	495	0.95
6	11	8.8	5.7e+02	1.8	0.1	2	21	508	527	508	528	0.85
7	11	0.19	12	7.0	0.2	2	23	583	605	582	605	0.96
8	11	0.019	1.2	10.2	0.1	3	20	622	639	621	642	0.92
9	11	1.6e-05	0.0011	19.8	0.7	1	23	648	670	648	670	0.97
10	11	0.00014	0.0091	16.9	3.2	1	23	677	699	677	699	0.97
11	11	0.0026	0.17	12.9	2.5	1	23	705	728	705	728	0.89

Sequence Information

Coding Sequence: ATGCGTTGCAGCGTTCAGAACTGCCGCAATGAAACTAGCAGAAGCACTAAGATCGTTGGGATTACTTATCACTTGTTTCCGAAAGAACCTATTTTGAGATCAGCATGGCTGGAAGCCCTTGGCAATCCAGAATGGACTCCCAAAGAGAGAAGCGTCATTTGCTCTGAACATTTTCAGAATGAGGACTTCTTCCTGTCAAAGACAGGCAGGAGGAAAATCAGAAATGGAGCTGTTCCTGCTTTAGTTCATGATTCCATAGAAGAACTGGAATCGCCGGCCACATCCaggGTTTGCAGGATATGCCTTGCGATGGACACCAGGCTATTTGACATCCGGGAGCACAGGCTAGATCATTTTTATCTGCAGATCACTGGGATTTTTGTGAACGATCAGGACAGACTCCCGCAGGGCGTATGCTGGGAATGCTCGCATCGCCTTCGCTCCGCGGCCGCGTTTCGGGGCAAGTCTTTGCGGGCGCACTCGCTTCTTCTAAAATCAATGCAGGCTGGAAAAAGTACAACAATAAGAGATATCAAAGGCATAAACCGAACAACCGAGCAACTCACAAGCACTTTAGTAAAAACGATTTGTAACTGCAACGACTCCGACTTACACATCCGGGAGAACGAAGTCATCAAATCTGAAGTCCAGACTGAATATAACGATAACGGTGATGAGTATAACGATAGCGATGATTTTGATTATAAGGATGAAGAATTTAAGGCACCCGAAGTAGAAATCAAAGATGAAAGCAATGAGATATTCATTGACGAGTTTAATGATTTTGAGTCTGACGATGAGAAGACACTAAGTGTGCTATCAAGTCAAGTGCTTGAGCTGGAGAGGGttgaagttaaaaagaaaaaagttagGAAGGTTAAGAAAAGTGAACCCGCCAGAAGTAAGGATGAAGTTGAGAACCCAGAGACTACTATGGATAAgtaCAAAACTTCAGATATCAAACGTCGCAAACATAGTGACGTATTAGACGAATCACTGTTCACTATCACTCCGCTAACCTATGAGGAGCAAATTGCAGAAGTGGAGAAACGCCAAGATTCCAATGCATATAAGAACGCACTGTTCAAATGCACGACGTGTTACCGCGGCTTTCAGATCCGCGACCGCTTTGAGGCGCATTTATTACGGCATAGCGAGAAAAGCGGTATGTACGAGTGTTTTATCTGCAAGACGCGAATGAAAGCTGCGCGGGCGCTTCGCAAACACATCACCGCTCTGCACTCAGAACAGTTCAGCTGCAAGGGATGCCCCTTCCTCACGAGAAACAGAGGTGTGGCTAGAGAGCACGAGAAATGGCATGCAGGGACCAAGTATCGATGTCCACACTGTTCTATGGAGTTCGACAAAATAACTACTTACATGGGTCACATCCGCATAAAGCACGCCTCGGACTGGGTTTGCGTGCTGTGTGGATACACATTCGTGAGTCGCAAGGGCGTGGAGGTGCACAAGCGGAAGAAACATCGCCTGATTGATGACAATACGCCGTTAGAGGGACCCACGTGTACAGTTTGCGAGGTACAGTTCGCGTCAGAAGAGGCGCACGCGCGGCATCTGAAGCTTTCATCACGACATATGACTGAGAGCGACCCCAACCGCCTCCGCAACGACTCTCAGAGTATGAAGACGGAGCGCATCGGGCGCGTGATGCGTCGCATCGAGCGCCGGCCGGTCATTCACCCGCGGCTCCCGGGCGAGGCGGCGCCGGACGCCCCGCGACCCGTCACCTGCGAACAGTGCGGCGTCCAACTGCGAGACTTGCGTCTGTACGCGCAGCACTTCCGACGTGCGCACCCCGATAAGAACCGAACCAAGTACCCCGCCATGAAGACGCCGGCCATGTGTGAGCTGTGCGGACGGATCTTCCAGAGCATGGCGCTACTGAAAGACCACATGTGGGTGCACACTGGCGAGAAGCGCTTCAAGTGCGCCGGCTGCCCCAAGAGCTTCACGCAGAAGAGCAACCTGGTGTTCCACGAGCGGATTCACAGCGAGTCGCGCCCCTCCTTCCCGTGTCCGCTGTGCGGGAAGCACTTCTCCTTCTACAACAACCGACGCCGGCACATGTTCatccACACGGGCCTAAAGCCGTTCAAATGCGGCTCGTGCGGAAAGTGCTTTACGACGGCGGGAGAACAGCGCGCGCACTCTGAGCACGTCCATATGAAGAAACCGTGGCCGAAGCGAGCGCGCAAGGAACTCTACCCTGACAAGTGCACTGAGCCCTGA
Protein Sequence: MRCSVQNCRNETSRSTKIVGITYHLFPKEPILRSAWLEALGNPEWTPKERSVICSEHFQNEDFFLSKTGRRKIRNGAVPALVHDSIEELESPATSRVCRICLAMDTRLFDIREHRLDHFYLQITGIFVNDQDRLPQGVCWECSHRLRSAAAFRGKSLRAHSLLLKSMQAGKSTTIRDIKGINRTTEQLTSTLVKTICNCNDSDLHIRENEVIKSEVQTEYNDNGDEYNDSDDFDYKDEEFKAPEVEIKDESNEIFIDEFNDFESDDEKTLSVLSSQVLELERVEVKKKKVRKVKKSEPARSKDEVENPETTMDKYKTSDIKRRKHSDVLDESLFTITPLTYEEQIAEVEKRQDSNAYKNALFKCTTCYRGFQIRDRFEAHLLRHSEKSGMYECFICKTRMKAARALRKHITALHSEQFSCKGCPFLTRNRGVAREHEKWHAGTKYRCPHCSMEFDKITTYMGHIRIKHASDWVCVLCGYTFVSRKGVEVHKRKKHRLIDDNTPLEGPTCTVCEVQFASEEAHARHLKLSSRHMTESDPNRLRNDSQSMKTERIGRVMRRIERRPVIHPRLPGEAAPDAPRPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPAMCELCGRIFQSMALLKDHMWVHTGEKRFKCAGCPKSFTQKSNLVFHERIHSESRPSFPCPLCGKHFSFYNNRRRHMFIHTGLKPFKCGSCGKCFTTAGEQRAHSEHVHMKKPWPKRARKELYPDKCTEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663529;
90% Identity: iTF_01219838;
80% Identity: iTF_01219838;