Basic Information

Insect: Plemyria rubiginata
Gene Symbol: -
Assembly: GCA_963576535.1
Location: OY754932.1:4374592-4375986[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.3 2.5e+03 -0.9 0.1 15 25 79 89 72 99 0.83

2 8 0.00069 1.4 9.5 0.2 11 43 128 157 124 158 0.84

3 8 3.6 6.9e+03 -2.3 0.1 18 28 208 218 200 225 0.77

4 8 0.96 1.9e+03 -0.5 0.1 18 28 264 274 259 287 0.86

5 8 2.7e-05 0.053 14.0 0.3 14 43 290 316 281 317 0.91

6 8 0.013 26 5.4 2.6 5 26 310 331 310 333 0.90

7 8 0.00027 0.52 10.9 3.6 9 39 343 369 336 376 0.79

8 8 0.0003 0.58 10.7 3.6 10 44 372 402 367 402 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.3	2.5e+03	-0.9	0.1	15	25	79	89	72	99	0.83
2	8	0.00069	1.4	9.5	0.2	11	43	128	157	124	158	0.84
3	8	3.6	6.9e+03	-2.3	0.1	18	28	208	218	200	225	0.77
4	8	0.96	1.9e+03	-0.5	0.1	18	28	264	274	259	287	0.86
5	8	2.7e-05	0.053	14.0	0.3	14	43	290	316	281	317	0.91
6	8	0.013	26	5.4	2.6	5	26	310	331	310	333	0.90
7	8	0.00027	0.52	10.9	3.6	9	39	343	369	336	376	0.79
8	8	0.0003	0.58	10.7	3.6	10	44	372	402	367	402	0.85

Sequence Information

Coding Sequence: ATGATCAAAGAAAACATTAACATAGATGTAATCCTCtcagtaaaaaaagaaaaagacagCAACACAAAACACCACATCGCAAAAGTAAAATCTACAAATTTGTTCGCAGGTGCGATAATCAATGTGGAGGACAAATATAAGAAAATGGAGGTCGCACGCAAGCTGCTCTTTAAAAGACGAAATGTCGAATACATCCTGCAATACAGCAATGTGACGCCGTTTATGTGGCATAAATCTAAATACAAATGCTTCTTTTGTTCCGAAACCATGCGCGATCCGTCTTACCTCCGTCAGCATACCGCTCTAGCGCACGTAAACGCCAATCTTGAGCTTATAATTTTCGACAGAACAAAAAACAATCGCAACAAAGATGCTGCCATCAAAATCGATGTAACAAACATTCGTTGCAAACTCTGTGAACAAACTGTAAACTCTCTCGAAGAGTTGATACACCATATCATTATAGCACATGATGCGGAATACGATGTCAACATCCCGAACTGTGTACTACCTTTCAAGCTAGACAAGGATACACTTTCATGCGCTACTTGCGACTCGAAGTTCGCTTTCTTCGAATATTTACTTAGACATGCTAATAAATACCATCTGTTTCACCAGTTTGTGTGTGACGTGTGTGGTACAAGCTTCCAAGGCGAGAACCATCTCAAAATGCACTACCGTTACTATCATAGGGAAGGTGGTTATATCTGTGACACCTGTGGCGTCAGTCTCGCAACGCTCTCCAAGAAAATACTGCACGAGAAAAACGTTCATTCGGTCAATCTTTACACGTGTCCGCACTGCCCCGAAACGTTCAAAAGCCCCTAtctaaaaaaactacatttagCCAACGTTCATGGAGTTGAAGAGCTGAAGATAAAATGCCCATACTGCTTCAAAGTGTATCCGCAAGAGAGTATAATGTCGCGTCACATGAGACGCGTCCACTTGCGGGAGAAGAACGTCGAATGCGAAGTGTGTGGTGACAAATTCTTTGGTCCTTACGACGTGAAACTCCACATGTTGAAACACAATGGAGACAAGAAGTTTGTTTGCTCTGTCTGTGGCAAGAAATTCTCGAAAAAGAGTAATTTGAATTCCCACATGATTCTACACACTCGAAAAAAGACTTACAATTGTGGTATTTGTGGCAGGTCGTTCGCTTATCAGTCTTCTTTGAAGGTGCATATTAAGCATAGGCATCCGCAGGTTGAACGCTTCGCCCTTCTCGAAGAAATGATGGATGGTGATTTTGTGAACTTAGAGGTGATTGAAGAAGAGTTAAAATGCGATGAGATTACAGAGTTCATACAGGAGGGATCGAGTCTCATTCTAGAGGAAGAAATACCTGCACCATTAGGGAAGCTCTGTATTACAACCGATGCGAGCCGTTAA
Protein Sequence: MIKENINIDVILSVKKEKDSNTKHHIAKVKSTNLFAGAIINVEDKYKKMEVARKLLFKRRNVEYILQYSNVTPFMWHKSKYKCFFCSETMRDPSYLRQHTALAHVNANLELIIFDRTKNNRNKDAAIKIDVTNIRCKLCEQTVNSLEELIHHIIIAHDAEYDVNIPNCVLPFKLDKDTLSCATCDSKFAFFEYLLRHANKYHLFHQFVCDVCGTSFQGENHLKMHYRYYHREGGYICDTCGVSLATLSKKILHEKNVHSVNLYTCPHCPETFKSPYLKKLHLANVHGVEELKIKCPYCFKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMLKHNGDKKFVCSVCGKKFSKKSNLNSHMILHTRKKTYNCGICGRSFAYQSSLKVHIKHRHPQVERFALLEEMMDGDFVNLEVIEEELKCDEITEFIQEGSSLILEEEIPAPLGKLCITTDASR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01171734;
90% Identity: iTF_01429304;
80% Identity: iTF_01220020;