Prub021517.1
Basic Information
- Insect
- Plemyria rubiginata
- Gene Symbol
- arid5b
- Assembly
- GCA_963576535.1
- Location
- OY754932.1:1143871-1158218[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-13 1.9e-09 38.3 0.1 3 89 227 300 225 300 0.91
Sequence Information
- Coding Sequence
- ATGAGATTAAGAAATGATAAAGATCAAAGTGGCGTCTTTTTAAATACCGTTTCTGATCACGAAGTCTTGGCCATCAACGACAAGGTGGTCCTCAAAGCGGAAGACCTGCTGAGCTGGATCTGCACCGGCGACTCCTGGACGTGGGGCGTGCGCGCGGTGTGGCGCGGAGCCTGCGCGCCGCCGGCTGAGGAGAAGGAGTCTGCGCCGCTGCATCACACCAAGCTGGACTTTAGCGATATTGATAAGGAGAAGAGCACTATTGAGGTGGAACCAGAGGATGCTGGCGTGGTAGTTTTCTCGTACCCTCGCTACTGCCGCTACCGAGCCGTGGCGGCGCGGCTGGACGGCCTGCAAACTGACTGGCTGAGAGACTCGCTGGTGGCCGCGCTGGGGGGGTATGCAGCTCCGACCAGGAACACTAGGATATTGTATTGTAAGGACACATTCGAGTACCCGGAGCTGGAGGGCCACGAGTTCGTATGCAACCACCTCGCGCCGCGGCTGAAGGGGCGCCCGcgcggccgccggcgccgccagcGCTCGCGGACGCAGTCGCGCGACTCGCGGACCAGCGACGAGGACAAGCCGGACGACTATACCGCCGTCACTCCCCCCTCTGGGCCGCGCCGCCTCTCCCTCCGCAACGGTCCCGAGAAGCCCTCCGGAGAGGAAGTGGAGAGGGACTTCCTCCGTCGGCTGAAACACTTCTACAAGGGACGCAACGAGTCGCTCTCGAAGGCGCTCACTCTGAAGCACATTTCGCTAAACGCAGTGTACTCCATGGTGACATCTCGCGGCGGCTACGACGCCGTCTGCAGACACAAGCTTTGGAGAGTCCTCTTCACCGACCAGCCCGTGTATACGCGGAGGCATTACGAAAGATACCTCTTAGCGTTCGAGCACCACGAAAAGCGCAGCGGCGCCAAAGCCAACGGTATCACGCTACCAATAGATACCATACATGTTATGGACTCGCCGTTAAGGGAGGAGAAACCGCACTCGCCCTTCAAAAGCGTGGACTGTGAGACTGgtgaaatcaaagAGGAGCACAGTAACACATCGAAGCCAGCTTCGGAGCTGAACATGGAATTCCTGGCGTCCCTGCCGGAGGACCAGCCCAAGATAGCGGTGCGGCCGCGCGACGCGCTCATGGAGCCCAGGGATCAGCCGCAGTGGATGACTGCCAAAGATGCGCTTGAGTTCCCGAGCGACGCGTCCCCGATGCATCCCCTCCCCGCGCCGCGCCCCCCCGCCGCCGTCAACGGACACGCCCACAACGGGATACCACTCGATCAGAAGGGCCACCGGCCGGCGGGGCGCAGTTCCCTGCGCGCTGTGAGAGTCAAACCCGCACGCCAGAGCGCGCAGCCGGCCACCGCGCCCAACACACCTCCGACGAACTACCCTCTTCTAGCGGAGTCCCTCTCCGCGTCCAGTTCTCCGGCCGCGCCCGCAGCGCCGCCCGTCACCAACTTCGGCATCCACCATCCGCCCGCGCCAGCCGCCAGCAACAGCGACGACGAGATAGTGGAGGTGCCGTACAAGCCAAAAACACCGGAAATCATCGACTTGGACGAGTACCCGGAAACGGAGAGCCCGGACGCGAGCGCCAAGAAGAAGAGACTGGACATACTCAAGGAGCGGGGGCTCGAAGTCACGCCCCTCCCGCCCTGGCCAAACTCCGCCCCCGTCATAACCCCCACTCCTTTACTCCTCAACCCCGTGCAACAGCAGATCATGGCGTCGGGAATCTATGGTTATTACACCCCTCCGGTCGTCGTAGCCCCAGCCTACCCCAACGGAGTCCTACCCCCCAGGGTGATCCAAGCCACGTCTATATACGGCTCCTCGAACCCGGAGAAGACGGTATACGGGAACCCTAAAGACCCTTTCATGCCGCCCCCGCACACTCTACACGGGGTGCCGATTAAACCCAACAGGGTGCAAGTTACCCCTAACCCTCCCCAAACCCAAGATATCCTAGACTTGACTTGCAAGCTGTCGAAACCGGCGGTGGAAATTGTAAGAGTGCCAACCGTTCCCTCGCCCTCGAAACCTCAGAATAGTCAAAACATAGCCAAGAATTACTCTATTGTCGATGGTAAAGCGGTGGTCGGGTCGAACTTGGAGATAACTTTAGTTAACAAGGCGGAAACGCCCCCTAAAAAGGACCCCGTTCGCCCCCAAAAACGGTCCTCCAACGGAAAGTTCGTAGCTAAAACCCCTACACCCCCAAAAGACCCTAAGGTCCCCAAAAAGCCCCCGATTAACGTACCCACCTACCAAATACGAGACGACCCTTCCCCTACTGGTTCAGTTCATTCGAGTAGCTCTCGCGAGAGCCAAAAAGAGCCACAAAAACCGGTCCCGATGTCCTCATTCCTAGACCCCTACATGGCTTTATACAGCTTGGCGGGTCAGATGGACCCTAGACACTTGATGGGGGGTCAAATCGACCCACGCCACCTCGCCGCGTACAGAGAGGCAATGGTTAACCAGTTTAGGGGCTATTCGCATTTGTTAAATATGGGCGTAGCAAACCCTACAACGAAGAATTGA
- Protein Sequence
- MRLRNDKDQSGVFLNTVSDHEVLAINDKVVLKAEDLLSWICTGDSWTWGVRAVWRGACAPPAEEKESAPLHHTKLDFSDIDKEKSTIEVEPEDAGVVVFSYPRYCRYRAVAARLDGLQTDWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRQRSRTQSRDSRTSDEDKPDDYTAVTPPSGPRRLSLRNGPEKPSGEEVERDFLRRLKHFYKGRNESLSKALTLKHISLNAVYSMVTSRGGYDAVCRHKLWRVLFTDQPVYTRRHYERYLLAFEHHEKRSGAKANGITLPIDTIHVMDSPLREEKPHSPFKSVDCETGEIKEEHSNTSKPASELNMEFLASLPEDQPKIAVRPRDALMEPRDQPQWMTAKDALEFPSDASPMHPLPAPRPPAAVNGHAHNGIPLDQKGHRPAGRSSLRAVRVKPARQSAQPATAPNTPPTNYPLLAESLSASSSPAAPAAPPVTNFGIHHPPAPAASNSDDEIVEVPYKPKTPEIIDLDEYPETESPDASAKKKRLDILKERGLEVTPLPPWPNSAPVITPTPLLLNPVQQQIMASGIYGYYTPPVVVAPAYPNGVLPPRVIQATSIYGSSNPEKTVYGNPKDPFMPPPHTLHGVPIKPNRVQVTPNPPQTQDILDLTCKLSKPAVEIVRVPTVPSPSKPQNSQNIAKNYSIVDGKAVVGSNLEITLVNKAETPPKKDPVRPQKRSSNGKFVAKTPTPPKDPKVPKKPPINVPTYQIRDDPSPTGSVHSSSSRESQKEPQKPVPMSSFLDPYMALYSLAGQMDPRHLMGGQIDPRHLAAYREAMVNQFRGYSHLLNMGVANPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00638438;
- 90% Identity
- -
- 80% Identity
- -