Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_963576535.1
Location
OY754922.1:7088573-7114491[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-24 3.5e-21 75.9 0.0 2 89 101 184 100 184 0.93
2 2 4.6 1.3e+04 -2.9 0.0 45 68 1293 1317 1281 1331 0.70

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACGAATGTGGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCGGATAATTTCACGTTCACGCCACCTCCGGAGGCCCCTGTCTTCGAGCCCACCGCGGAAGAGTTCCTGGACCCGTTGGCGTACATCAGCAAAATCCGTCCCATCGCGGAGAAGTCTGGGATTTGCAAGATAAAACCCCCAGCGCACTGGCAGCCACCATTTGGTGTGGATGTAGACCGCCTGCGATTCACACCGAGAATCCAACGGCTCAATGAGCTGGAGGCAATAACCCGAGTGAAGCTGAACTTTCTTGACCAGATCATCAAATTCTGGGAGCTGCAGGGCTCAGTGCTTAAGATCCCCACAGTTGAACGTAAGCCTTTGGACCTGTACGCGCTACACAAAGTTGTCAAGGAAGCAGGAGGCTTCGAAGTATGTTCAGCAGAGCGCAAATGGTCGAAGATTGCGCGCCGCATGGGCCACCCCCAAGGGAAAGGCATAGGCTCCATCCTCAAGAACCACTATGAGAGGATCCTGTACCCATATGATGTGTTTAAAAGCAACGGCGCTGTTGGAGATAATAAGGAGACTAAGATAGAAGTAAAACGCGAGTCTACCCCCGACGGTGCGGGCTGCGGCCCCCGCGCCCGCTCTGCCTCAAAGTGTACCCCCGCCACCCCGCCGCCGGCGCCCTCCCCCCGCCGGTACAAGTGCGAGCCGGAGTCCGCTGAGGGTAGTCATACTGAGGGGGCACTGCCGCCTGACAACGACAAGGGGATCAAAACACCTGTCAAGGAAGAGAGCCCCGAGACTAATCGACGCAGTCCCCGCGAGAACAAGTGGATGTCAAGAACCGGCAGCTGCGGCTCCCGCGGCCGTGTGACGCGCTCCACTAGGCTACGCGAGCACCGGATGTCCAACATGACGGTTTCCGTTACTCCGGCGCCGCCGATAGGCCCCGTGCCTGACGTCTTGCCCGGCGTTGTAATAAGCCCCAATGATCCGTTGGCGAAATACATGTGCCATGTTTGCGGTCGCGGCGACGTGGAAGAACAGATGTTGCTGTGTGATGGCTGTGATGATTCGTATCACACATTCTGTCTGCTGCCGCCCTTAGCGGACGTCCCTAAAGGCGACTGGCGGTGCCCCGTTTGTCTAGCTGAAGCGGTGTCAAAGCCGACCGAAGCCTTCGGATTCGAGCAAGCTACCCGAGAGTACACTCTGCAGCAATTCGGAGAGATGGCCGATCAATTCAAGTCGGACTACTTCAACATGCCAGTACATATGGTACCAACATCAACAGTTGAGAAGGAGTTCTGGCGCGTTGTGTCTTCCATCGATGAGGATGTCACGGTGGAGTACGGAGCTGATCTGCACTCCATGGACCATGGATCTGGTTTCCCGACAAAGTCCAGCGCTCATCTCTACCCCGGCGAGCAACAGTACGCGGAGTCCAGCTGGAATCTCAACAACCTGCCGGTCTTGGAAGGCTCTGTGCTGGGACACATCAACGCCGACATATCTGGGATGAAGGTGCCATGGCTGTATGTAGGCATGTGTTTTGCCACGTTCTGCTGGCATAATGAAGATCACTGGAGCTATTCCATCAACTATCTGCACTGGGGAGAACCTAAGACTTGgTACGGAGTCCCAAGCTCTAAGGCGGAACAGTTCGAAGCAGCCATGAAGGCAGAGGCTCCCGAGCTTTTCCAGTTGCAGCCAGATCTTCTGCATCAGCTCGTCACCATCATGAATCCCAATGTTCTGATGAAAGCTGGAGTTCCAGTTTACAGAATGGACCAGCATGCGGGTGAATTCGTAATCACATTCCCGCGCGCCTACCACGCAGGTTTCAACCAGGGATATAACTTCGCGGAAGCCGTCAACTTCACACCTGCTGACTGGCTGAAAATGGGTCGAGAATGCGTACAGCACTACTCAACGCTCCGCCGCTACTGCGTTTTCTCCCACGACGAGTTAGTTTGCAAGATGGCACTCGAAGCTGACACCCTCAGCCTGACTGTGGCGTTGGCTGCCTATCGGGATATGAGGACCATGCTGCATACTGAACGGAAGCTTCGGAAGAATATCCTGCACTGGGGGGTAACAGAAGCGGAGCGCGAAGCCTTCGAGCTTCTCCCCGACGACTCGCGGCAATGTGTGTCGTGCAAGACGACGTgcttcctgtcgtgcgtgacgtGCCCGTGCACGCCGCACGTGGCGTGCTTGCGGCACGCGGCGCTGTTGTGCAGCTGTCCGCCGCATGCGCACCGACtgagGTACCGCTACACCCTGGACGAGCTGCCAGCTATGCTGGAGAAGTTGAAGAAGAAGTCGGAGCAGTTCCGCGAATGGGCGGAGGCGGTTCAGAACGCATTAGACCCTGACACGCCCAAGACTTGTGATCTGGACGGACTAAGAGCCCATCTGCAGAGGGCTACTGAACTCAAGATGCAAAAGACCGAGCTAGTACGCGCCCTAGAAACTGCCATCGAGGACGCCGAGAAATGCGCGTCCGTCATCCAGCAGCTAGACTTGAACAAGATGCGCACAAGGACCCGCCACCACGACCCCAAGTATCGGCTGTCTATCCACGAGCTGACTCTCTTTGCGGCGGAGATAGACAGTCTGGCGTGTGTGCTGCCAGAAGGTTCTGCAGTAAAAGAAGTTCTGCGTCAGACTTCAGAGTTCGAGACACGATCAACTGAACTGCTCAACAAAGACTTGGAGAAGATCGAGACGGCTTATGTCAGGGAATTGGAAGAGACTGTGGAACTAGGCAGCCGCCTCTGTATAGTACTACCTAACCTAGAAGCGGTCACAGTCCGGCTAGCACAGGCGCGTTGGCTGGAGGACTCGCAGCATCACCGCGACAACTGCAACTCGTTGACTCCGGCTGCTCTGAAGACTCTCCTGGCCAAATCTGAAGAGCTACTTCCTCATATCGCCATTGAGAAGGAAAGAGCTATACTTTACAAACTGCAAGCTGAAGTAGAAGACTGGGAGAAGCGTGCCCAAGAAGTCCTAGTAGACGGCAGCAAACCATTTGATGACGACAACCCTCAATACAACACTATTGAAGAACTGACCCAGCTACTGTCAGAAGGAGGTGATATCGACGCGGCGCTACCATCCTACCACACTTTGCAGACAGCTATCACGCATGCCAAGGATTGGTTGAACAAGGTTGAAGATATGCAGTCAAAAGATCTATATCCCTACATGCACAGCGTCGAAACCTTGGTGAAGAAGAGCCAGCAGATTCCGTTAGCACTTCTCGAGAAGCATCAGCTGTCGTGTGCGCTCCATTCCGCCCGGGAATGGAAGCGCGGTGCAGCGGAGATGTTCCTCAAGCGAGTTCCGCAGCATGAGAAAAAGAACTCGCCACACACGTTACTCGAAGCCCTCTCTCCCCGCACTTCGCCCgtgggcgggcggcggcgcACACAACCGTCACTGGAAACGACTCTATTCTTAGACAAGTTCAATGAAGAGTCCACTCCCACGGAGATCGTGGCAGCTTTCAAACTGGCTGAGGCACGGGAGCTGCAGGCTATCAAGGAGCTCAGATCTCGCAATATGCGTAAAGATGTGCGCGCGCCGCCGGCTACGACCATCACGTTCTGTATCTGTCAGAAGCGGCAATATGGCGTCATGACGCAATGCGAACTGTGCAAGGACTGGTTCCATGCCTCTTGCATCGCGAACGCGCGAGACGACCGCGAGGAATCGCCGGACCGCGAGGGCTTCCCCAGCAGCGAGTCTAAGTTCCTCTGCCCCGAGTGCGTGAGGACCAAACGACCTCGCTTGGACAGGATCCTGGCTTTACTTGTATGGCTACAGAAACTCCCCGTGAGATTGGCTGAGGGCGAAGCCTTGCAGTGTGTGACAGAACGAGCGATGGCGTGGCAGGACCAAGCCCGCGCGATGCTGACTCAGCCTCATCAGCCCACTTATCACAAACCTGCGAGTCGGGAGAAGGCTGATAAACTGAACGCAGAACTGAAGAAGGCGACTGGCCGTGGCCATGACAGCGCGTCGCAAAATCCAAGATCGTCCGCGTCTGTGGAACACGCGTATAGTGCGACTCCAAGATCGCCCGGCGCCAGGCTTACACCAGCGGCGCTGCAGAAACTTGAGGATGTGATGCTGGAAGGAGATTTATTGGAGGTTGTCCTAGAAGAGCAGCAACAAGTGTGGGAGGCAGTGAGCACCGCCCGCGGCGCTGCgggccggcgcggcgcgcgcgtgtTGGACGCGGGCCGCAGGAAGCGACACCGCGCCACCCCGCGCCCGCACCAAGCCAAACGGACCCGCCAGGCCAGGCACGCGCAGCCCGGACAACCTGGACCGTCAACATCTGCCACAGTTTCGTCGTCAGTAAAGGCATCGACGTCATCAAAGCGTGGAGGAGGTACCACCAATTACCTCAATAGgaaacagGGTCTATCTTCAGCATCAGGGCTGATGATGCGTAAACACTACATGGCAAGACAGGAGCGTCGCAAACGAGGCGTTGCCACCAGACATAGAGGTTCTACAAGGGGCGGTGCCAGTACATCATCAGCGCGGATAGCGCAGGCGCAGGAGAGCAGTTCCTCATCCATGTCTTCAGCTGAGGATGAAGACGACTGCGTGGCTGTTAATTGTCTGCGGCCTACTGGCAAAGAGGTGGATTGGGTGCAATGCGACGGCGGCTGTGACGGCTGGTTCCACATGCATTGCGTCGGCCTCGCCAAAGGATCGCTGGGAGAGAACGATGACTACGTCTGCGGTACTTGCGCTAGAGACAAGCAGTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFGVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKVVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVGDNKETKIEVKRESTPDGAGCGPRARSASKCTPATPPPAPSPRRYKCEPESAEGSHTEGALPPDNDKGIKTPVKEESPETNRRSPRENKWMSRTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPIGPVPDVLPGVVISPNDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVQHYSTLRRYCVFSHDELVCKMALEADTLSLTVALAAYRDMRTMLHTERKLRKNILHWGVTEAEREAFELLPDDSRQCVSCKTTCFLSCVTCPCTPHVACLRHAALLCSCPPHAHRLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLQRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSTELLNKDLEKIETAYVRELEETVELGSRLCIVLPNLEAVTVRLAQARWLEDSQHHRDNCNSLTPAALKTLLAKSEELLPHIAIEKERAILYKLQAEVEDWEKRAQEVLVDGSKPFDDDNPQYNTIEELTQLLSEGGDIDAALPSYHTLQTAITHAKDWLNKVEDMQSKDLYPYMHSVETLVKKSQQIPLALLEKHQLSCALHSAREWKRGAAEMFLKRVPQHEKKNSPHTLLEALSPRTSPVGGRRRTQPSLETTLFLDKFNEESTPTEIVAAFKLAEARELQAIKELRSRNMRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSSESKFLCPECVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLTQPHQPTYHKPASREKADKLNAELKKATGRGHDSASQNPRSSASVEHAYSATPRSPGARLTPAALQKLEDVMLEGDLLEVVLEEQQQVWEAVSTARGAAGRRGARVLDAGRRKRHRATPRPHQAKRTRQARHAQPGQPGPSTSATVSSSVKASTSSKRGGGTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGVATRHRGSTRGGASTSSARIAQAQESSSSSMSSAEDEDDCVAVNCLRPTGKEVDWVQCDGGCDGWFHMHCVGLAKGSLGENDDYVCGTCARDKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
-
80% Identity
-