Pnir045476.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- -
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010016554.1:91-1572[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-11 1.4e-06 29.8 0.1 2 37 258 293 257 296 0.90 2 2 0.055 9.2e+02 1.6 0.1 43 48 362 367 353 369 0.77
Sequence Information
- Coding Sequence
- ATGGCCCGCAATATGAACATATCACATTTCCGTTCAGGTGCAATTTTACGATCAATTGTGCCACTGAATAATGGCTCGGAGTCATCAACAGAAGATAAGTCGATCGGTTTAACTTCAATATCACATAGACCTTTAAGAAGACTGCGAAGTGACGCAAGCGATGATTCAACTAATGAAACTAACGGTAATACCTTCAATGATGCTGATATGACTCTTCCCAACTCAACCCCAAGAAGAAGACTTCGAACCTTTGTTGGAAGTAAGGAAAATACTCCATCTATTCGTGATGATTCTCATGATCCTGTCTCTAAAACTAACGATAAAGCACACAAAGGTTCTGAAGTAAGGACGACGAGGAAATCTTCCAGAAGGAGAAGACCCAAATCAAGGCCCAAAAGGGAACCCATCTCATTTATTGTCACTTTCAAATATAGAGATTCCAATACCAAAACTGCACCAACAACCCCAACCAAACGAACTCAATCCACTTCACAATCTTCACCTTCATCCGAAGGCAAGAACAACGTCTCCAACGAAATAGTGACTCGAAAACCTACAACAAAAGAAACAAAGAGAGCGATGATGAAGAAATCCAGCACCACAACCCCCAAAGCCGGTACAAAAAAAGCAAAGGTGAAAATAAAGGTGAACGCATTTTCAGAGAATAACGCCCCAGCTCCTACACCAAAAGTTGAGAAGAAAGAAGCGTTGATCCTTACTCCCAAAAAGTCGAGAGTGGAAGGAGATCTTGTTGAATTGAACTCTAAAATCTCCCTCAACGATATCTTATCTGGGAGAAGAATCGCTTATGGTTGCAAATCACTTAGCTGTAATCATATATCTTGCTTTGATTTTTTCAGCTTCCTTGAAATGTATCAATCATATGGTCCAGTCTTTCAAACATTTTTCGAGAATGCTGGTAATAATAGAGTGTCAAGATATTACTCAGAGCCTTATGAACAGCCAGATCTCCTCAGAGGTGAACCTGAAAAGATTTTGGTACGACTAAAGTCTAGCATAAATCACACAGTCACAGAGAGAAAATTCACTAGGAAGACACGAGAAACGCATTTTCCTAACATAAAGTGTCCTATCTGTTCAGTAAGGTTTCAGCCCAAGGAGTTAGTGTTTGATGATTACATGGATTGCATCATTGGCACTTTTCAAGATAGCGAAATAAGTAATGTCATGATCGAGCATTTTGAAGAAGGTTCGCTTGTGACCCCCATTAGAGAAACGCCAGAGATTGAACAGGAAGTCATCTCTTTAGAGGATGATGACGAACAAAGTGCTGAAAACGATCCAGTAGCGTGGAGAAATACAAGGCTAGATATGGAAGACGAACAATCCGATCTTAGTGATTTGTCGTTTGACGACCGGCCTGTCTATTCTGATGAAGACAGTCAACTTTCAAATCTGGGTAGCCTATTTGGTGATGAAGACATTGGAGGTACAGAGGATGATCCTATTGTGATTGACTGA
- Protein Sequence
- MARNMNISHFRSGAILRSIVPLNNGSESSTEDKSIGLTSISHRPLRRLRSDASDDSTNETNGNTFNDADMTLPNSTPRRRLRTFVGSKENTPSIRDDSHDPVSKTNDKAHKGSEVRTTRKSSRRRRPKSRPKREPISFIVTFKYRDSNTKTAPTTPTKRTQSTSQSSPSSEGKNNVSNEIVTRKPTTKETKRAMMKKSSTTTPKAGTKKAKVKIKVNAFSENNAPAPTPKVEKKEALILTPKKSRVEGDLVELNSKISLNDILSGRRIAYGCKSLSCNHISCFDFFSFLEMYQSYGPVFQTFFENAGNNRVSRYYSEPYEQPDLLRGEPEKILVRLKSSINHTVTERKFTRKTRETHFPNIKCPICSVRFQPKELVFDDYMDCIIGTFQDSEISNVMIEHFEEGSLVTPIRETPEIEQEVISLEDDDEQSAENDPVAWRNTRLDMEDEQSDLSDLSFDDRPVYSDEDSQLSNLGSLFGDEDIGGTEDDPIVID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -