Pnir067295.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- SIZ1_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010018969.1:2-1956[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 3.2e+04 -3.3 0.0 11 24 76 88 74 94 0.75 2 2 5.1e-25 8.5e-21 75.3 2.5 1 49 297 345 297 346 0.97
Sequence Information
- Coding Sequence
- ATGTGCAGCGCACCTAATAATGATCTTGCACAGATGGGCGAGATAGCAGGTCTTAGAGTGGCTGAGTTGAAGCTTTTAGCGAGAGCCTTGGGGGTACCTATGACTGGAAGAAAGGCAGATATACAAGATCGTCTGCGAAGATTTAATCAGATAATAGTGAACCAGAATGGCAGGAATAAATTGATAGCCTTGGCTCGTATGGTAGCTGATGTTGCACAGAGTGGAAGAATAGATGTACCGTTTGAATCACTTTGCAACCATTATGCAAGTACGAACAACGCTGCCGTTTCTACTAGCAGGAATTCCACACATGCACATCATCACACCTCTAGAAACACAACAAGACGTTGGTTATTCTTTAGAGAGAACccgtttttcattttaaagaagcTAGTGACGCAGGATGCAGGCTATTGCCCGAAAGCTCCTGATGGAAGAGGAACTTGCATGATGACTTTCCAGCTAAATGATAATGATTACAACTTATTGAAGAATTCAAATCGTTACAAATTGATACTGATATGTGGTGTTTATGAGAAGAATAAGACAGACGACGCATTGATACAGTTCCCCCAAGCATTGGAGATCCATTTCAATAACGTGCAGCTCAAAGATAATGTGAAAGGTATCAAGAATAAGCCGGGAACATCCAAGCCAGCAAATTTGACACCACACGTCAAAGGACTAGGTGGtctgaatgaattaaaaatgatttatgctTTTACTGAAGTCGATCACCTAATATTCTGCTATCTAGTAGAAGAAGTTCCagtggaaaaaatattacagaaagtGCTAGAGCATCCTCATATTTCGAAACAGATAAcattgaatgaatttaataaagatgaTACAGACGAAGACGATATCAAAGAGGTTTCCACAAGATTGAGTTTGAAATGTCCGCTTTCGTTTATGAGAATAAAGTATCCTGCTAAAGGAATTCAGTGTACTCACTTGGCATGTTTCGACGCGTTATATTTCCTTTATCTCCAGGAGCAAACACCACTCTGGCAGTGTCCTTTGTGTAACAGAAGCGTCAAGGTCAAGGAATTAGTGATCAGTGATTACGTTGCTGATATTATTGAGAAGACAGATGAAAGTGTCGAAGCTGTTGAAATAGAACTTGATGGTACTTGGAAGCCTGTAATCGAAGAAGACGATACAAATGGACATGCAAGTTCAAACAAGGACAATTCTACCACTCCAgcagaagaaaatgaaaactcCACAGATGCTGTTTCAGTCAAAGACTCTCCAGTGAAAAAGAAAGCCCCTTCCTCTCCAATAATTATCAGTCTTGACAGTGATGACGAGGATGCTGATTTTTCCTTGATAGCTGAAACCTCAAAAGGCTCTACTGAAAGACGACCACCAACAACGAATGCAGCTACTGGCAACTCATTTGACTCTCGAAATTCTCAACCCACAACACATAGAGAGCCTTCTCAACGAGAACCTACTCAACGAGAACCTGCTCCTCAGTCAGCCACGACTGAATGGCCACTAGCTGATTATCGTGAACAACCTTTGCATTCACACAATCCACATAGAAATCCACCAACACCTGTATGGTCCTCAAACCAACTACATATTCCTCATTTTCCTGCTATACCGTACGCTGATGGGCCACTATCTTTATTTCCTCCTCGTGGATATGAAACTCAGACTCATCCACTACCTCAACCATCTCAACCACCTCAGCCACCTCAACCACCTCAACCACGTTATGGCATGCCTGGTATGTTTAGTGGCCATACATCATCGATATTGGCTCAT
- Protein Sequence
- MCSAPNNDLAQMGEIAGLRVAELKLLARALGVPMTGRKADIQDRLRRFNQIIVNQNGRNKLIALARMVADVAQSGRIDVPFESLCNHYASTNNAAVSTSRNSTHAHHHTSRNTTRRWLFFRENPFFILKKLVTQDAGYCPKAPDGRGTCMMTFQLNDNDYNLLKNSNRYKLILICGVYEKNKTDDALIQFPQALEIHFNNVQLKDNVKGIKNKPGTSKPANLTPHVKGLGGLNELKMIYAFTEVDHLIFCYLVEEVPVEKILQKVLEHPHISKQITLNEFNKDDTDEDDIKEVSTRLSLKCPLSFMRIKYPAKGIQCTHLACFDALYFLYLQEQTPLWQCPLCNRSVKVKELVISDYVADIIEKTDESVEAVEIELDGTWKPVIEEDDTNGHASSNKDNSTTPAEENENSTDAVSVKDSPVKKKAPSSPIIISLDSDDEDADFSLIAETSKGSTERRPPTTNAATGNSFDSRNSQPTTHREPSQREPTQREPAPQSATTEWPLADYREQPLHSHNPHRNPPTPVWSSNQLHIPHFPAIPYADGPLSLFPPRGYETQTHPLPQPSQPPQPPQPPQPRYGMPGMFSGHTSSILAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -