Pnir010629.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- SFU1_2
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010021003.1:310-1596[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-19 1.2e-15 58.6 2.7 1 34 220 252 220 253 0.98 2 2 3.6 1.5e+04 -2.5 0.7 5 11 317 323 315 323 0.87
Sequence Information
- Coding Sequence
- ATGGACACCGACATCAACCAGGTTCTGCAGTCCTTCTACAACACAGACCCGCACAAGAGCACGCTCAAGGACATCAACCTCTCCCAGTCCTTCAGCGACCTCTCAACGAACCTCTCCATCAACAGAATGTACAACTCCAAGGCCTTCAAGCTCCTCCCTAACAACGACAGGATCTCCAACTTGTCCTGGAGGCTCTCCCACGCCAACGTGAACAACGCTAAGATCGATAAGAAGCGATGCAGCCAGAAGGGCTCCCAGAAAAGCGCTGCGAAGATCAAAGGAACCACCAAAGACATGAATAAGAACATCACCAGAAGCTTGAGCGCAACGATAGCTGCAAAAGAGCACGAAGAAGAGGATGCAAAGAACGAGGATGACAATGATAATGACAACGACAATGACGATTTTGATTATGTCGCACACATCAGAAGAATATCCCAGCAGGACAACAGCGTCAGCAACAGCACCAGCACCAGCACCACCAATAGCAATGTCGCCAATCCTGTCAACTTATCCAATACGAGATTCCTCACAAACCCTTCCATTCCACTATCCTCCTCTCTAAATGCCGCCATTAGTGCTCAATCAACATCTGCCTCACAATTGTCCTCATCCACAACATCAAACTCAACTataaatcaatcaaaaataatacaatgcaCAAACTGCTCCACAACATCCACCCCCCTTTGGAGAAGATCTTCTTCTGGTGAGATACTGTGCAACGCCTGTGGTCTGTTCTACAAGCTACATGGAATAATAAGACCAATAAAGCAAAGTAATCCACAACAAAATCAGCATACTTCACTACATAATTCACAGTATCAAATACCAAACACATCAATGCATTCATATTCATTCAACCAACATACACAAAACACACACAGCAATCACAACCACAGTATGGGCCCTAATTTCAATCACAACACAAATACGAATACAAACACAAATACAACCAAAACACCTTTGTCAAACGATTCTCCATTATCCCTATCTGCAAATTCAAATGGATACGTCTCAAGTTCATTATCTTCATTCTCGGAATTCGAAAACTACTTGAATTTTGATCAATCTTCAACTTCGACTAATACAGCCACATCAAGCACTACATCCCATCAAAACAGCAATTCAACTATACACAAGTCCAATGACAACAACTTCATGAGCTTTGACATCAATTACAACCTAAACGATCAATTCAACAGCATAAACCCACACCTAACTACAGGTGATGAAAAGATGAACATAGACACTGACGATTATGATTGGTTGAAGATGGGCATGTGA
- Protein Sequence
- MDTDINQVLQSFYNTDPHKSTLKDINLSQSFSDLSTNLSINRMYNSKAFKLLPNNDRISNLSWRLSHANVNNAKIDKKRCSQKGSQKSAAKIKGTTKDMNKNITRSLSATIAAKEHEEEDAKNEDDNDNDNDNDDFDYVAHIRRISQQDNSVSNSTSTSTTNSNVANPVNLSNTRFLTNPSIPLSSSLNAAISAQSTSASQLSSSTTSNSTINQSKIIQCTNCSTTSTPLWRRSSSGEILCNACGLFYKLHGIIRPIKQSNPQQNQHTSLHNSQYQIPNTSMHSYSFNQHTQNTHSNHNHSMGPNFNHNTNTNTNTNTTKTPLSNDSPLSLSANSNGYVSSSLSSFSEFENYLNFDQSSTSTNTATSSTTSHQNSNSTIHKSNDNNFMSFDINYNLNDQFNSINPHLTTGDEKMNIDTDDYDWLKMGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -