Basic Information

Insect: Pleistodontes nigriventris
Gene Symbol: -
Assembly: GCA_903653215.1
Location: CAHLDJ010000261.1:108122-119226[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00053 0.17 14.2 0.1 2 23 25 46 24 46 0.96

2 27 0.012 3.8 10.0 0.3 1 23 52 75 52 75 0.91

3 27 9.6e-05 0.031 16.6 0.1 1 23 144 167 144 167 0.96

4 27 0.0065 2.1 10.8 0.4 1 23 173 196 173 196 0.96

5 27 0.098 31 7.1 1.5 1 23 209 231 209 231 0.97

6 27 2.9e-05 0.0092 18.2 0.9 3 23 275 296 274 296 0.96

7 27 0.81 2.6e+02 4.2 0.9 2 23 359 382 358 382 0.93

8 27 2.5 8.1e+02 2.7 0.0 2 23 391 413 391 413 0.84

9 27 0.16 52 6.4 0.1 2 23 420 442 419 442 0.93

10 27 1.1e-05 0.0034 19.6 1.2 1 23 450 472 450 472 0.98

11 27 9.9 3.2e+03 0.8 1.8 2 23 529 552 528 552 0.89

12 27 0.00017 0.054 15.8 3.3 1 23 555 578 555 578 0.97

13 27 0.013 4.3 9.8 0.5 2 23 585 607 584 607 0.95

14 27 0.00057 0.18 14.1 4.8 1 21 646 666 646 667 0.94

15 27 0.0022 0.7 12.3 1.8 2 23 681 702 680 703 0.93

16 27 0.64 2.1e+02 4.5 2.6 1 23 706 728 706 729 0.95

17 27 0.0064 2 10.8 0.9 2 23 736 759 735 759 0.93

18 27 0.78 2.5e+02 4.3 0.2 2 23 767 789 767 789 0.95

19 27 2.9 9.4e+02 2.4 0.0 2 23 796 818 795 818 0.87

20 27 0.18 58 6.2 2.7 2 23 827 849 827 849 0.96

21 27 0.21 68 6.0 0.8 2 23 855 877 855 877 0.93

22 27 0.034 11 8.5 0.3 1 23 944 967 944 967 0.96

23 27 0.025 7.9 9.0 2.0 1 20 996 1015 996 1017 0.91

24 27 0.26 83 5.8 1.9 2 23 1105 1127 1104 1127 0.94

25 27 3.3 1.1e+03 2.3 0.9 2 21 1134 1153 1133 1156 0.94

26 27 0.14 44 6.6 1.8 1 23 1167 1189 1167 1189 0.97

27 27 0.039 13 8.3 0.2 2 20 1197 1215 1196 1216 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00053	0.17	14.2	0.1	2	23	25	46	24	46	0.96
2	27	0.012	3.8	10.0	0.3	1	23	52	75	52	75	0.91
3	27	9.6e-05	0.031	16.6	0.1	1	23	144	167	144	167	0.96
4	27	0.0065	2.1	10.8	0.4	1	23	173	196	173	196	0.96
5	27	0.098	31	7.1	1.5	1	23	209	231	209	231	0.97
6	27	2.9e-05	0.0092	18.2	0.9	3	23	275	296	274	296	0.96
7	27	0.81	2.6e+02	4.2	0.9	2	23	359	382	358	382	0.93
8	27	2.5	8.1e+02	2.7	0.0	2	23	391	413	391	413	0.84
9	27	0.16	52	6.4	0.1	2	23	420	442	419	442	0.93
10	27	1.1e-05	0.0034	19.6	1.2	1	23	450	472	450	472	0.98
11	27	9.9	3.2e+03	0.8	1.8	2	23	529	552	528	552	0.89
12	27	0.00017	0.054	15.8	3.3	1	23	555	578	555	578	0.97
13	27	0.013	4.3	9.8	0.5	2	23	585	607	584	607	0.95
14	27	0.00057	0.18	14.1	4.8	1	21	646	666	646	667	0.94
15	27	0.0022	0.7	12.3	1.8	2	23	681	702	680	703	0.93
16	27	0.64	2.1e+02	4.5	2.6	1	23	706	728	706	729	0.95
17	27	0.0064	2	10.8	0.9	2	23	736	759	735	759	0.93
18	27	0.78	2.5e+02	4.3	0.2	2	23	767	789	767	789	0.95
19	27	2.9	9.4e+02	2.4	0.0	2	23	796	818	795	818	0.87
20	27	0.18	58	6.2	2.7	2	23	827	849	827	849	0.96
21	27	0.21	68	6.0	0.8	2	23	855	877	855	877	0.93
22	27	0.034	11	8.5	0.3	1	23	944	967	944	967	0.96
23	27	0.025	7.9	9.0	2.0	1	20	996	1015	996	1017	0.91
24	27	0.26	83	5.8	1.9	2	23	1105	1127	1104	1127	0.94
25	27	3.3	1.1e+03	2.3	0.9	2	21	1134	1153	1133	1156	0.94
26	27	0.14	44	6.6	1.8	1	23	1167	1189	1167	1189	0.97
27	27	0.039	13	8.3	0.2	2	20	1197	1215	1196	1216	0.94

Sequence Information

Coding Sequence: ATGCTAAGCAAAGCGAAAAAGCAAACTAATGCATCTAATAAAGAAGGGAGTAATTCGGATGCAAAGAGATGGTACTGCGAAGTGTGTCCTTTAAACTTTGCAAGTGCCGATGACTTGAGGCAGCACGAGAAGAGTCATGATGCCGATAAGCCTTATATATGCATTTTATGTGAGAAAGACTTTGTTTTAAAGTCTTCTTTAAGTAGGCATATACTCTCATCTCACGGTGTTGATCCAACGCCACTGATCGAGAGtgataaatgtttgaaaaagtcGATGCAAGATGGAAGTGGACAACCACTCGTGATAAAAGAGGAACAAAACATTACCAAAGAAAATTCTACGTCGCCATTTTCTCCTGATAATATGGAAAATGACGACGATGAACAAGAAAACGGAAACGAAAATATGCTCGAAATAGAGACAGTTTTTGTCTGTGAAATCTGTACGCGAGACTTCAACGATCGAGCGTCACTTTGGTTACACATTCGAGCCACTCACAAAGAATACGCAGCGTTTGCATGTGGAGTTTGCCTAAAAATTTGTTCAGATAATGCACAACTATTAAATCACGTCAATATGTATCACGGCGGTTCAAAGCTTTTAATGTCTGAACAAAGAAGgtaTAGCTGTACGATATGTGGAAGACAGCATGACTCGCGTAAAAAACTTATAACGCACGTGTCAATTCACAATGTCGATCCGGGCTACGATCCCGCCAGCtttgtacaattaaatactaattactaTAACGAGAACGTCAACAGCAATGAAGGAAATGATCTGATCATGGACTGTGATGACGAAAATGAAAAAGTCGACTGCTACATTTGTTACAAATCATTCCCAAATGAGGACCACCTCATTCGCCATCAAAGAAACGCCCACAAGACTGAGCAGATGGTCCAAATGGGTGAATTTGGCGGCAATGGCGCAGCTGCCGGACAAAATGGAACTGGCAATCGAGCTCAGTACCATCTTTTCTTTGTGTGCGAACTTTGCGGAAGTTCTCATCCTAGTAAATGGGAGCGCTGGCTTCACGTCAGCAGTATGCACAACAACGAACCTTCCATCAAGTGCGAGCGCGACGACTGCGCTAAAATCTTCGCCACGAAGACCTTGCGCAACGAGCATGCGCAGCACCACCAACTCCAGGGTAGCTCGCCCAATACCTGCGAAATCTGCGGCAAGCTCTGGGGTAGTCGGGTCGATTATTGGAAGCACGTGATGGGTGTGCATTCCGACACGGTACCCCTCATCTGTGGCGTTTGCCTCAAGGTCTTTCCAGATGTGCTGCAGCTCAGCCAACATGTTAAACTAAAGCACTGGCCGCTCACTAATGGCGACTTCAGTTGCGACATATGCGGCCGGCCGTATTCGAACAAGAGTAAAATGTCGAGGCACAGGAAAATTCATGGCCTTGACGGGGAGGCTTACAACCCCGCATCCACCAATAGCAGTTTAATCATTAATGACGCCTCGATGAACGACGTTCCAGTTACTTTCCAAATTTTAGGTCTTCCAATTCCTCTGCAATTGGACAATGGCCTCCCGCAACCCGTGGAGGCAGCCTCGGTTGATCTGAGCTGCGAAATGTGCGGTGACCTCAAATTCCCTTGCCTGGAGGACCTGTGTAACCACCGACGTATGGCTCATAGCCTCTTTCCTTGCGACCTTTGCAACAAATGCTACGGGCGCACCTCGCATCTCTGGAAACACGTGAACCGCGTACACAAGGGCCACGAGGACGTTACCTGTCGGTTCTGCCTCAAAACGAGCGCGTCCAAGGATCATCTCGCGGCCCACATCGCCAAAATACACCGATACGAGCCCGAACTCAAGAGCGAGGTCAGGGAAGCGATGAGCTACAAGAGCAGTAGCTATAGCGCAGCCGCAGCCGCAGCCGCCAGCGCAGCCGCTGAAGATGATGTTCTACATTTCTGCGAGAAGTGTAACAAATCCTTTCACAAAAGGTATCTATTGCGTCGCCATATGAAGGGTTGTCAAAACTACCGCAAGGATCCGGGCGCCCTGTTGACGCGCTGTAGGGCTTGCGAGCGCATCTTCAAGGATCGCGCAAGCTTGCAGAAACACATCGAAAACCACCACAGCTCTTACGAGTGCCACCTATGCAAGGAGACGATAACGTCGAAGCTCGGCATAATGACGCACAACCGCGTACACCACATGCTCCACCCGGATCTCACCTGCGAGCTCGAGAACTGTCGCAAGCTCTTCAGGACAAAGGAGGACCTCGAGTCTCATCGCAAGGATCACAAGCATCACGGCAGTCCTAACGTGTGCGACTTTTGCGGAGACACTGTGGAGAATAAACTTAAGCTTAAAATGCATATATTGAGCTTACACAGGAATGAGATTGGCGTTTCTTGTGGAGTATGTCTGATCCCTATGAAAGACCCCAAAGACCTTAAAAAGCATGTTGAGGATGTCCACGAGAGTGTACTGCTGAAACCGAATACCTGTCaaGTGTGCGGCAAGCAGTACGCGTCTAAGTGGAAGGCATTCGACCATACGAAGAAATGCCACGGTAAGGTGTTCCGCACCTGCAAGCAGTGTCTGGCCGTATTCACCTCCGACGAGGACCTGCGCTACCACTACGAGCATATACACAACATTCCTAAGGACCAGCTGGACGCGTTCCAGTACCGGCTGGAGGTGGCCGGCAGTAAAATGGATGACTACGACCTCGGGCCCCTCGAGGTCGTCGTCAAGGAAGAGCCCGAGGAGCTGGACTTCGACATGGAGCCCTTCGACGAGGACAATTGCAACTCGAACGACTCCAAGAGGCGCCGCTCCATCGGCGACACTTACGACTGCGAGATCTGTCCCGAGATATTCCTCAATCACGAGCTCCTGTCCTCCCACTACCGCAACGTCCACAACACCGACCCCACGAGGATGTTCAAGAAGATGCGGCTCGAGCCCGCGGCCAAGACTAAGAAGAAGACGCGCGACCGCGAGAACTACGAGTGCAAAAATTGCCAGAAGCAGTTCTGCACCAAGACGCTCTACCTCGGTCACGTGAGCGTGTGCACGCGCAGGTCGACCTCGATTCTCGAGGCCCACCTCAAGAACAACAACCAGGTAAAGCGCGAGGAGCCCGAGCCCGCGCTCTGCGAGACGAACCTCAACATCCCGGACTTCAACCTTTTCGAGGACATTAACATGCAGCTGTCGGGCCAGAAGCCGGTGCCGAGCCTCATGCCTCTCGGCCACTCCTCCTCCAAGTCCTCCAAATACTCTCGAAAGGATTCGCGCAAGGTGTACGACGAGTCGACCAACACCGAATGCACCTGCGAGGTCTGCGGCAAGCAGTGGCCAGCCAAAAAGCACCTGTGGCAGCATCTCATCCGATTCCACAGAGCCGAGGCCGCGGTGACCTGCGGCGTCTGTCTCAAGTTGTGCGCCACGTACGAGGACCTTGCCGAGCACCTCAGGTGTGCCCACCCTGCCATCCTCTCCACCGCGGGCAACAACTTCACCTGCAAGATATGCGGCCGTTACCACAACGCCCGTAGCAAACTCTTGCTGCACATGAGCATACACATCAATTGCGCGGCCAACTCCATGTGCCAGCGTTGCAACAGAAGCTTCGAGAACGACGAAAAGCTCAAGGAGCACATCGGCGCCTGCCTCGGAGCCCAGGGCGAGGAACACAGTCCCGACAAGCCTATGAAGGACGATGGCGAAGAGAAGGGAAGCCTCATCGGCGACGAGGACGAGCCCGAGGACAACGAGTACGAGTCGGAGGACGAGGACGACGAggaggacgaggacgaggatAACGAGGACAATGATAACTCGGAAAACGTCGACAGCAGCTCCGACAAGTCCAATGACTCCGACAGTAACAGCAGCAGTAACAGTAACAGCTCGagtgacgacgacgacgacgacagcGATGACGACGATAGCAGTAACAGCAAAGACTCCGACAGCGTGCAGCttcagcaacagcagcagcaacaacagcaacaacagcagcagcagcaacaacagcagcagcaacagcagcataACGCTGCCAAAGCCGAAATCGTCGAGGAGAACGAAACGATGAGTCTCGGGGACGATGACGACGAGGAGGGCGAGAGCGCCGACGAGAAGACGAGGTACGAGGCCATGTCCGAGTCCGAGGACGACGAATACTCGAAGAAAAAGGAAGACTCGGTGCTCGTTAACTACTCGGACGACGAGGGACCTCCGCCTCTTAGTGCTATGATGCCGCTCGCCGTGAAGGAGGCCAGCAGCGAGCAACAAGAGGACGACAGTCAGGATGAATTGAGCGCCAGGCGTCGCACCCTTAGTAATTCACTGAGTTCGAAGAAGGACAAAAGCGAGGAGAGCGAAGATGACAGTAGTGAGGTTGAAATGGAAGAGGAAGAGGCCGAGGCCGAGGCTGAGGCCGAGGGAGAGGCAGAAGCAGAGGAAGAGGCAGAAGCTGAAGCGGAGGCCGAGGTCGAGATCTCCGACGAAGATGATGAGGTACAACAGGCTGAAATTGTCGATCCCAATAGCGCCTTTCACGCGGACAACAATTCGAGGAGCAGTAATGAAGGGGAGGAGGAACAAGAGGAAGCAGAGGAGGAACAAGAGGTAGAAGACCAGGAGGAAGAGCAAGAGCAAGTGGACGAGGGAGAGGAGCAGGAAGACCAAGAGGTTCACGAGGTCGAGgaggaagaagaggaagaagaggAGGAAGGTGGCGAGCACGCTATGAACGAGGAGGAGGTCCTCGAGGTTGACGAAAATGACATGCACAATCTCAACGGTACCGTCCTCATGCTCGCCAACGATGCGGATGGCAATCAGATTCTCATCGAACGTAACATGGCCGACCTTGAAAACGACGATTCGGTCCACGACATGGCGCAATACGTGTTCCAGGACGGCACAGGCTTCGCCCTCGAGGATTACGAAGCGATTGTCGAGAGTCAGGGAGACGAAGAAGAGGACGAACAGCATCACGACTTCGAGGTGGAGATCGGCAACGTCCAGGAGGAAGAACTCGACGAGCAAGAGGTGGACGAGGAAGACGAGGAGCACGAGGATCGGGAAGAGGCTCAAGAAGAAGATCAAGATGAAGATGAGCTCAGCTCTAGTGCCAAAAGCTAA
Protein Sequence: MLSKAKKQTNASNKEGSNSDAKRWYCEVCPLNFASADDLRQHEKSHDADKPYICILCEKDFVLKSSLSRHILSSHGVDPTPLIESDKCLKKSMQDGSGQPLVIKEEQNITKENSTSPFSPDNMENDDDEQENGNENMLEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNTNYYNENVNSNEGNDLIMDCDDENEKVDCYICYKSFPNEDHLIRHQRNAHKTEQMVQMGEFGGNGAAAGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSMHNNEPSIKCERDDCAKIFATKTLRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEAYNPASTNSSLIINDASMNDVPVTFQILGLPIPLQLDNGLPQPVEAASVDLSCEMCGDLKFPCLEDLCNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCLKTSASKDHLAAHIAKIHRYEPELKSEVREAMSYKSSSYSAAAAAAASAAAEDDVLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMLHPDLTCELENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGSKMDDYDLGPLEVVVKEEPEELDFDMEPFDEDNCNSNDSKRRRSIGDTYDCEICPEIFLNHELLSSHYRNVHNTDPTRMFKKMRLEPAAKTKKKTRDRENYECKNCQKQFCTKTLYLGHVSVCTRRSTSILEAHLKNNNQVKREEPEPALCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHSSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYEDLAEHLRCAHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCAANSMCQRCNRSFENDEKLKEHIGACLGAQGEEHSPDKPMKDDGEEKGSLIGDEDEPEDNEYESEDEDDEEDEDEDNEDNDNSENVDSSSDKSNDSDSNSSSNSNSSSDDDDDDSDDDDSSNSKDSDSVQLQQQQQQQQQQQQQQQQQQQQQQHNAAKAEIVEENETMSLGDDDDEEGESADEKTRYEAMSESEDDEYSKKKEDSVLVNYSDDEGPPPLSAMMPLAVKEASSEQQEDDSQDELSARRRTLSNSLSSKKDKSEESEDDSSEVEMEEEEAEAEAEAEGEAEAEEEAEAEAEAEVEISDEDDEVQQAEIVDPNSAFHADNNSRSSNEGEEEQEEAEEEQEVEDQEEEQEQVDEGEEQEDQEVHEVEEEEEEEEEEGGEHAMNEEEVLEVDENDMHNLNGTVLMLANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVESQGDEEEDEQHHDFEVEIGNVQEEELDEQEVDEEDEEHEDREEAQEEDQDEDELSSSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -