Pnir058548.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- Myrf_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010002331.1:19646-42458[+]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.13 3e+03 0.2 0.0 36 82 61 107 34 132 0.73 2 3 0.43 9.7e+03 -1.5 0.1 25 45 203 228 187 278 0.58 3 3 8.7e-31 1.9e-26 95.2 1.9 2 170 333 473 332 473 0.89
Sequence Information
- Coding Sequence
- ATGGATTTCGCCTGGACTGTGATATCGCATCAAATAGAGGTGGCTCAGGTGGCGGCTGATAGAAACGAGGATTTTGAGACCGAGCAAGGCCCGCGTAGACTGATTTCTACGGCAGGAAAAAGTGATTTTGTTGGAGGAATAGACAACGAGGCTTTGGATTTTTCACAATTAGAAGATTTCATTAATAGCGATAGTGAACAACCAACCacATACTTCGCGGACACTCTTGCTCACAATGAGAACAACTCTCCAGCAAATCATGGGACACGCATCGAGGTGACAACAACCAGTCAACAGCTTTCACCCAGGTTGCCTTCGCCAATTACGCAAAATCATTCAATCACGACCACCTGCAGTTCCGTGAATACAACTGTAACACCCGGTTCTACTTACAAAGACCCACAATCTTACGTACTTccTTTGCCGACGGAAGTGTTGCTGCAGCAACATCAAGGCAGCACCGTGAGTTACACACCTACTCTATTACCACCGTCACCACGAGGAATGAGCAGCTCACAGGAGCCATTGTTACTTACACATCCCGTGCTCACACCTCTTCTTGCAACAAACGCGTCAATCCTTCCTACGCAACAACAGCAACAGACGCAGCAGCATCAACAGCAACAGTTGACTATACCTCTGTTGCCTCAAGTGCACGACCAGCATAACTCTAGCGGCATAACGACTTTGTATACATCGCTGCAATCCATCCCCAAAAAGCGCAAACATAGCCAGGATGGGCTCATACACGTCAAGCAGGAACCTGAATTGGGAACTGTCGAGCACAGCTGCAGCAGTAGCAGTACAGGTCTCGATAATGAAGAAACGAATGGAGATAATAACTATTCGGACACTACTTACCAATGTATACGTTTCCATCCTTTTCAACAAGCCTCTTGGCATGCATTGTGTGATCACAATTTAAAGGAAATTCCAGTGCCGCATTATAGAGTGGATGCAGATAAAGGATTTAATTTTAGCAATTCAGACGATGCATTTGTTTGTCAGAAGAAAAATCACTTTcaaATTACTTGTCATGCACAATTACAAGGAGAAGCTGTTTTCGTAAAAACCGTCGAAGGCTTAAAAAAAATCAGCAGTTTTCAACTTCACTTTTATGGTGTCAAAGTTGAATCTCCGGCTCAAACTATTAGAGTTGAACAAAGTCAAAGTGACAGGAGTAAAAAACCATTTCATCCCGTTGtGCTTTTCAGGGTCGAAATGGGTGGCGAACGTGTTACCAAAGTGACCGTCGGTCGATTGCATTTTAGTGAAACGACCAGCAACAATatgagaaaaaagggaaaacCTAATCCTGATCAAAGATACTTTTATTTGGTTGTTGGTTTACATGCTCACACAGCCGATCAAGCCAATTACCAAGTAGTTGCACATGCTTCTGAGCGGATAATCGTCAGG
- Protein Sequence
- MDFAWTVISHQIEVAQVAADRNEDFETEQGPRRLISTAGKSDFVGGIDNEALDFSQLEDFINSDSEQPTTYFADTLAHNENNSPANHGTRIEVTTTSQQLSPRLPSPITQNHSITTTCSSVNTTVTPGSTYKDPQSYVLPLPTEVLLQQHQGSTVSYTPTLLPPSPRGMSSSQEPLLLTHPVLTPLLATNASILPTQQQQQTQQHQQQQLTIPLLPQVHDQHNSSGITTLYTSLQSIPKKRKHSQDGLIHVKQEPELGTVEHSCSSSSTGLDNEETNGDNNYSDTTYQCIRFHPFQQASWHALCDHNLKEIPVPHYRVDADKGFNFSNSDDAFVCQKKNHFQITCHAQLQGEAVFVKTVEGLKKISSFQLHFYGVKVESPAQTIRVEQSQSDRSKKPFHPVVLFRVEMGGERVTKVTVGRLHFSETTSNNMRKKGKPNPDQRYFYLVVGLHAHTADQANYQVVAHASERIIVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -