Pnir052392.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- ncor1_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010003021.1:4857-20326[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-08 0.00011 24.1 0.0 3 43 966 1006 965 1009 0.96
Sequence Information
- Coding Sequence
- ATGAGTCGCCTAGAAAAATTGAAGAGCAACGCGGAACCTTTTTTTTGCTCGTGTAAGTGTATTTTCTCCGAGCCGAAGCCAGGAGGTCGTGCAGATAAGAATACGTTTCTTTGTCTCCTTCGAAATCTCCGCAGAGTCTCCGGGGAATTTATCAGCTCTCGTACCGCAGGAGTAGAAGGAGATGTGATCAATATGAACTCGCGAAGTCGTCGTCCGATAATGTGGAGGCGCGACACCGAGCCAAGAAACGAGGAGGCGAAAAGAAACGGAGCTAACCGTTACAGCGGCGAAcGGAACTACGGTTCGAGCTACCGTAGATCAAAAGAAACGCAAAGAGCCCGCGTTCCCGATGCAGAACCGTTGCGAAACGCGCGGGACAGCGAGTCTCTAAAACTTTGCTCGGATAATCGGGAATCCCCGGCAATTCCTAGAGGCATCGCCAGCTGTTCCTCGCAAGCTTTAACGATGTGGTTTCCGTTGACTGTTGCAGGCCCCAGCAGAGCTACGCGGTGTCGGGGGCGTGGGGGGCGGCGGCGCtgctgcggcggcggcggcgggggcgCCGGCGGCGGCCCTGGCAGCCTCGTCGTCGGCGCAGGCGCGGCGCGCTACCCGCAGCACCACCAGCAGCAGCCGGCCCCCACCTCGGCCCCGGCTGGGCCCCCAGCCCACCACTTCTACCACTACCCCCACCTGCAGCAGCACCACCAGTTCCAGCACCACCAGGTCGCagcagccgccgccgccgccgccgccgccgcctcatCATCGCCGGGATCGTTGGCGATGAATAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAAGCGACATCCTCGACCTCGTCCTCGCGAGACCAGCACACGGTTAGAGACGATCCGCCTTTTTTGGCCCACGATTTTAATCGGAACGGtTTCGATGCTTCGCCGAGTTCGCGTCGACGATACGACGCGGAGAATTTTATCGGTCTCCCAAGTTTCGCTTTTCGAAAGACGCGGAAACGAGGTAAATTAGAGCATAAAATTCTAGAAACCGAACTCGAGAAAGTCTCGAATTCGTTCTTCGAAATTAATCATCGAGCGGCGATTCGAGGGAACGGACGCGTTATCGGCGGAGAGGGTAACtcggttttttttttgtttttcgccTGCCCGCAGCAGCAAGGAAGCGACCCGAGCGGCCTGAACATCACGATAATGAACATCACGGTGCCGCCGGTGGTGCCGGTGCCCGCGGGCCTGCGCTTCGTCCACCCCTACCTGCCCCCGCCGCCGCCCCACCCGCACCCCTCGCCGCAGTCGGCGGCCTCGGTGGCGCAGGTCGCCTCGTCCAACTCGGCCTCGCCCGTGTCCGCGTCTTCCGGCCCGTCCTCCATCGTCCAGCAGCAGGTCAGCAGGCAGCACCCGCCCTCGGCCCCGTCGCCCGCCTCGGTCGCATCCAACGCCGCCGCCGCCTACACGAGGGACGTATATCGCAATGCCAGCCCTAACGTTAACGAGCGAGTGGCGATAAGCGTGAGCAGCAGCCCCGTGTCCTCGCAGGTCGTCGGCGTCGGTAGCGAGTACGTGGTGAGCGGCCGGGGCGAGCGGCCTCGGATATCTCTGCTCCCGGCGCCGGCCTCCATCGCACCCGCGGCCTCGCCCACCGCTCCCACGGACTACCACGCCGCGGCGGCGCGCAACAATCGCGGAGGCGGGGGCGGCGGACCCGCGATCCTGGCGATGCAGCCGCAGGACTACCGCCCGAGTCCCGTGGACATGGCCCAGATGCAGCAGGACGCGCCCCCCTTCAAGAAGATCCGCCTGGGGCAGCCCGTGCAGCAGCTGCCGCCGacgcagcagcaacagcagcagcagcagcaacagcagtcGATATCGCAGACGGAGTGCCAGAGGATCACGAGTGCGCAGGACACCTTGATGAAGCAGAAACACGTTCAGCAGCTACAGCAACCGCTCAGGATAGATACAAGGCCAACGGCGGGTGTGTATACACCACAAACGGAAGCCATCTCGCCAACTCTCCCAGAGCCAAATACGCAAGAGGATGCGGCATTCAGGAGTACCAAAGACGATCTCCTTCAGCAGATCGCCAAAGTCGATCGGGAAATTGCTAAAAGGGAGTCTCAGATTAGTAAGCTTCGAAAAAAACTTAAGGAGTTGGAAGAAGTTGCTAGTAAACCCTTGGAGGCACCCGGTACTAAGCGACTCGTCGAGGAGGCGTCTCTGCAACCCAAACATCAGTCGctcgtacaaaaaatttatgctgAAAATAGGAAAAAGGCGGAGGAGGCGCACAGGTTACTGGAGAAACTAGGCCCAAAGGTGAAACTGCCGCTTTACAATCAACCTTCGGACACGAGCATATACCAGGAGAATCGCACGAGGCATCAGTGTATGAAGGCGCGCCTCGTGGCCAGATTGCGCAAGGAGCATGCGGAGCGCGCCTCCCTGCATCGCCAACAATCCCAGACGTACGCGATTCTCGTGCAGGAGTGGCACCGCAAGGTGGAGAAACTGGAGGCGACGCAGAAGCGCAAGACGAAGGAGGCCAAGAACCGCGAGTTTTTCGAGAAGGTCTTCCCGGAGTTGCGGAAGCAGCGCGAGGATAAGGAACGCTTTAATAGGGTTGGCGCGCGCATTAAAAGTGAGGCTGATCTCGAAGAGATTATGGACGGTCTGCAGGAGCAGGAGGAAGAGTTGTCGACCGAGTTAAAAAATGCGTTGAAAACTCATCAGATGGAGGACAAGAAGATGCGCTCGTACGCTGTGATCCCGCCGTTGCTGTTGGACGCGAAGCAACGGAAAATCGCATTTCAGAATCGCAACGGCTTGTTGCAGCCGGAAGAGCTCGAGGCGTTGCACAGCGAGAGAAAACTCATTAACGTCTGGAGCACGACGGAGCACGATATGTTTAAGGAGAAGTACCTCCAGCATCCCAAGAACTTCGGAGCGATAGCTCAATCGTTCGAGCACAAGTCCGTAGCGGATTGCGTGCATCACTACTACCTCACTAAAAAAGCGGAGAATTATAAGCAGCTACTGCGAAAGTCGAGGCGAACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACGACGGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAAGAGAACCCTCAAAGTAGCTCGGCGTCGGCAAGTAGTAGTAGCAactcgacgacgacgacgtcgactCCGTCGACGACTACCTCCTCGTCATCGTCAACGTCGGTCACGAGCGCGAGCTCGATCAGCGCGACGTCATCGTCGTCTAGCGCCGCCGTTGCCGCGAGTTCGTCTAGTAGTAGCGTTGCCGGGGGCACGAGCTTAACCTCGGAGTCCTCgccgacgacggcgacgacgacggcgacgacggcgacgacgataACGTCGACGGCGTCGGCAGCAGCAGCGTCAGCATCCGTCCCGAGTATCAGCGAGACGACAACGACGTCGAGCGTACTCACGACGACGTCAATGTCGTCGACCAGCGCCAAGGACGCCCGCGAGGCGAACAAGGAAAACAAGGAGATTAAGACAGAGTCCAAAGACTCGCTACTTCTTAAGGATATCAAAGAGGAATCGCAGTCGAGTTCCGAGACACTCTCTAGCAGGGAAATCAAGGTCGAGGGTAAGGGCGCCCTGTCCTCGTCGTCGAACACCAGCGTAACGAATACCAACAACGCCGGTGGTAACCTCCAGCTCGaccagcagcaacagcaacagaaggacaaaaagaaaaatgtggGCATCACGGGAGGTTCGACTGTTACCAGCAGGTCAAAAGACAAGAAAAAGGAAAACCACGCGACTCCCATGGAGACTAGCGACGAGGAGGCGCAAGCCATGGATGCGATGGGTAAGTCgacagttttcttttaa
- Protein Sequence
- MSRLEKLKSNAEPFFCSCKCIFSEPKPGGRADKNTFLCLLRNLRRVSGEFISSRTAGVEGDVINMNSRSRRPIMWRRDTEPRNEEAKRNGANRYSGERNYGSSYRRSKETQRARVPDAEPLRNARDSESLKLCSDNRESPAIPRGIASCSSQALTMWFPLTVAGPSRATRCRGRGGRRRCCGGGGGGAGGGPGSLVVGAGAARYPQHHQQQPAPTSAPAGPPAHHFYHYPHLQQHHQFQHHQVAAAAAAAAAAASSSPGSLAMNSGPAGGPGQPPAGLQATSSTSSSRDQHTVRDDPPFLAHDFNRNGFDASPSSRRRYDAENFIGLPSFAFRKTRKRGKLEHKILETELEKVSNSFFEINHRAAIRGNGRVIGGEGNSVFFLFFACPQQQGSDPSGLNITIMNITVPPVVPVPAGLRFVHPYLPPPPPHPHPSPQSAASVAQVASSNSASPVSASSGPSSIVQQQVSRQHPPSAPSPASVASNAAAAYTRDVYRNASPNVNERVAISVSSSPVSSQVVGVGSEYVVSGRGERPRISLLPAPASIAPAASPTAPTDYHAAAARNNRGGGGGGPAILAMQPQDYRPSPVDMAQMQQDAPPFKKIRLGQPVQQLPPTQQQQQQQQQQQSISQTECQRITSAQDTLMKQKHVQQLQQPLRIDTRPTAGVYTPQTEAISPTLPEPNTQEDAAFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEEVASKPLEAPGTKRLVEEASLQPKHQSLVQKIYAENRKKAEEAHRLLEKLGPKVKLPLYNQPSDTSIYQENRTRHQCMKARLVARLRKEHAERASLHRQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKTHQMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEALHSERKLINVWSTTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSSASASSSSNSTTTTSTPSTTTSSSSSTSVTSASSISATSSSSSAAVAASSSSSSVAGGTSLTSESSPTTATTTATTATTITSTASAAAASASVPSISETTTTSSVLTTTSMSSTSAKDAREANKENKEIKTESKDSLLLKDIKEESQSSSETLSSREIKVEGKGALSSSSNTSVTNTNNAGGNLQLDQQQQQQKDKKKNVGITGGSTVTSRSKDKKKENHATPMETSDEEAQAMDAMGKSTVFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -