Pnir064783.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- RAP1_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010019220.1:2-1730[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-10 6.5e-07 31.2 0.0 4 44 351 397 350 399 0.94 2 2 0.16 3.4e+02 3.3 0.0 1 19 434 452 434 454 0.92
Sequence Information
- Coding Sequence
- ATGGTCTCATCATATATACTACAATATTTACGCGTCGTCCTCATCGTTCACTGCGAATTTCACTATCGTCAGAACTTGAGAGCATCGAAGCGAGCCCGCGAGGGCGCTAGCCCCATACGCACACTACACCACCGGGGTAGTCAACTGCACCCTATTCACCAGCCCTCTCTGTGCGTAGGCCTTCCCCAAAACAAAAAAACCCATTATCACATTATTAATCTTCACAGTATCTTTCGCCTGCCCCACTTACCCTACTTACCCTCTCCAATGGCTGTGTTTTGTAGATTTTGTAGACCAAGACCGGGTGACCCTCAGCTCGAAATATTTCGCGATCGCGAGCTTTTTCCAAAATCTTCAAAACAAAAAGGACATCCACACACCAAAATTCAGCTCACTCCACGGGAAACAATGTCAACAGATCATACAAAAGAGTCCGTGTCCGCCGCTGTAGCTGCTGCTGGGAAAGCTGGCGAACAACAGATTGCAATCGATGAATCGCTAGTCCAACACCAAGTAAATAGTAAAGATCAAGTTGCCCAAGCTGGCACTGGAGATGCCCAGGGTGCTTCGTATGCTTCTGGATTAGGATTGGGATTATTCGCTACCGAGGATAAGGGCAGTTTGGAGTTTTATATCCCTCAAAATGAACCTGAGAGAGATGTGCTCATCCAATTGATCTATAAACATAATGGTGCGGTCTATGATGATCCAAACAGAGGGTACTACATCTCCTCCTTCGCCGAAGGTCATCGTGAAGTGATTGATCCTAAATTCATTTTTGAGTCAGATCTTCAAGGTACGTTGTTGCCTATTGATAACTATAAACTTGCTCCACAACCTGGAATCTACGCTATGGATGATACTGAACATGTTAGAAATATTGTGTCTTATTTAGATGAGACTCAACAAGCTCAGATCAATCAGGCACACCAAGAACAGCAACAGGCTGCACAACAGGCTTCCCCACAGGCTCAGGCTCAAATTTCACAACCTACGAAAAAGAAAGCAGACGATATTACTGGTATGGTCGTCCATGGTAGTAAGATTGGTTTTACTTTGGAAgaggataatattattttggaatACGTGAGAAGAAACCCACATCGTCGTTCTACGCACACATTGTTTGATGATATTGCAGAGAAGATAGGAAGACACACAGGTAATTCAGTTCGTTACCGTTATAGAAATTTCGTTGAGAAACAGCTAGATTATGTTTACCAAGTTGATGCTAATGGAGAAATTATGACTGATGCAGAAGGTAATCCACTTATCTCAAAAGAATTACCAAAGACCTTAAAGACCAAATACTCTGCTGATGACGATTTTGAGCTATGTAAAGCTGTTAGAAAACATATAAATGAGAAAGATACAGTATCTTACAAGGCTGATCCTAAAGATTTAGTCCTTCCTGGTA
- Protein Sequence
- MVSSYILQYLRVVLIVHCEFHYRQNLRASKRAREGASPIRTLHHRGSQLHPIHQPSLCVGLPQNKKTHYHIINLHSIFRLPHLPYLPSPMAVFCRFCRPRPGDPQLEIFRDRELFPKSSKQKGHPHTKIQLTPRETMSTDHTKESVSAAVAAAGKAGEQQIAIDESLVQHQVNSKDQVAQAGTGDAQGASYASGLGLGLFATEDKGSLEFYIPQNEPERDVLIQLIYKHNGAVYDDPNRGYYISSFAEGHREVIDPKFIFESDLQGTLLPIDNYKLAPQPGIYAMDDTEHVRNIVSYLDETQQAQINQAHQEQQQAAQQASPQAQAQISQPTKKKADDITGMVVHGSKIGFTLEEDNIILEYVRRNPHRRSTHTLFDDIAEKIGRHTGNSVRYRYRNFVEKQLDYVYQVDANGEIMTDAEGNPLISKELPKTLKTKYSADDDFELCKAVRKHINEKDTVSYKADPKDLVLPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -