Pnir018623.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- RCOR3
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010007154.1:1-6365[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 4e+03 -0.1 0.4 37 44 24 31 18 32 0.87 2 2 2e-13 4.4e-10 41.4 0.0 3 46 122 165 120 165 0.97
Sequence Information
- Coding Sequence
- GGATCATGTAGCAACTGCGGCGTTGCTTGTCATAGCGTTCGTGCTACGCCAAAGGGACACGCGTGTCATAGCTGCTATCTGCATTGGAGGCGCACGGGTGTTGCAAGACCACTGAGTTCTATGCCGGGTCGTTCGAACAAACGAAAGCCACCGCGTGGATTAGTCGTTAATCACGACGACTTGGCAGCACTAGCTGGTCAACCGAACCAAGCTATCAACACTCTGCAAGCTATTGACACTGAAATCGTTAGCCTGAAGCGACAAATCCAATCGAACAAACAACAAGTGAGCGCACTCAAGCGCAAAACGTCGGATGGCATCGATGAATTACGGCCGCCCGAAAACTCTAGTCGAATAAATTCGCGCTGGACTAATGACGAACTGCTCCTTGCAGTACAGGGGGTACGAAAGTACGGCAAAGACTTCTCGGCGATTGCCGATGTCATAGGTACCAAAACAGAGGCACACCTGCGCTCTTTTTTTGTCAATTATCGACGGAGATACAACCTCGACGCCGTACTTAAGGAGTACGAAGCTGAGAATGGACCTATTCTGATTGAAGATGAGAAAGATGAAAagATGGAAGTGGATCAGACAACAAATCCAGAATCAGCAGAAACTTCACAGAAAACAAAAACAGTAGTTGTTATAAATCAATCTACCAAATAA
- Protein Sequence
- GSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPNQAINTLQAIDTEIVSLKRQIQSNKQQVSALKRKTSDGIDELRPPENSSRINSRWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIEDEKDEKMEVDQTTNPESAETSQKTKTVVVINQSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00287159;
- 90% Identity
- iTF_01467031;
- 80% Identity
- -