Pnir048675.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- RCOR1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010021949.1:1-1461[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-15 6.2e-12 47.3 0.6 3 46 152 195 150 195 0.97 2 2 9.7 2.1e+04 -2.4 0.0 14 24 354 364 352 364 0.76
Sequence Information
- Coding Sequence
- CTGTTAACAGAATGCAGCGGAAGGCAGCTGGGGCCGCACCCGTGCACGATCTGCCAGGCGACGGTGGAGGCGGGCAACCAAAGTAGGCCCCTGTCGCGCAGCCAAGCCTCGCAGTACGGGCTGCGCGAGGAGCAGGTGCCCGCGGGGGCGCGCGTCTGCAACACCTGCAGGTGCAAGTCGGTCCGGGGCCGCTACACGACCTGCCCCCTCCCCGGCTGCCCCAACCTGAGCAGCGCCAGCTCCAAGACGAGGGTCAAGCGGCTCCGGGCGCTGCCGCCCAAGTGGAACGACCTGCCGCCCGAGACCCGCGACCCCATCATCCAGGAGTTCCAGATCCCGAGCAACACCACCAAGTGCTGCTCGGCCTGCTTCAACCGGATCTCGCGCCGACTCGCGCCCCACTTCTCGGTGTCGAGCGGCGAGGGCACCGACGAGGCGGACGCGATCGGCCGCCAGTGGACGGACGAGGAGCTCGAGCAGCTGCGGAAGGCGCTGCGCGAGCACGGCACCAACTGGCCCAAGGTCTCCGATCAGATCGCCGGCAAGTCCAACCACCAGTGCAAGAACTACTACCTGACCTACAGGAAGAAGCTCGGCCTCGACCAGGTCGTCGCCGAGTACTACCAGTCGCTCGGCGAGGAGCGGAGGCCCTGCCTCACCGACGAGGAGGAGAGCGGCAGCAGTACCAGTAGCTGTGATGAGTTGGCTGTGCACGATACGAGCGATACTGCGAGTGCGGGTAGTCCCGCGAACACGATATCGAGCAGCACGCCCACGGCCTCGGGGTCCTCGTCGACGACGGCGGGCGGCCTGCCGATGCCCTTCCCCCAGTCCCAGGACGCGAAGGTCGCCGAGAAGCTCGCGGACGTCGCGGTGGTGTCGCTGGTTGCGCCCTCGCCGATGGCCTCCCAGCAGCCGCAGTCCAACCCGCCCACGAGCACGAAGGAGGACTACGACAGTTCCGCCACGGTAAGACTGATTAATCCGGGGAACCGAATCGCTATAATCTTCGTCCTTCTCTATCCACACGCTCCCGATCCTCCTtgtttagtttttcttttactcgCGTCTACTCTTGGAAAGCGTTGGGAGTGTCCGT
- Protein Sequence
- LLTECSGRQLGPHPCTICQATVEAGNQSRPLSRSQASQYGLREEQVPAGARVCNTCRCKSVRGRYTTCPLPGCPNLSSASSKTRVKRLRALPPKWNDLPPETRDPIIQEFQIPSNTTKCCSACFNRISRRLAPHFSVSSGEGTDEADAIGRQWTDEELEQLRKALREHGTNWPKVSDQIAGKSNHQCKNYYLTYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDTSDTASAGSPANTISSSTPTASGSSSTTAGGLPMPFPQSQDAKVAEKLADVAVVSLVAPSPMASQQPQSNPPTSTKEDYDSSATVRLINPGNRIAIIFVLLYPHAPDPPCLVFLLLASTLGKRWECP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00287155;
- 90% Identity
- iTF_00287155;
- 80% Identity
- -