Pnir050962.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- REB1_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010020689.1:232-1749[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0051 11 8.0 0.5 5 41 186 244 183 247 0.74 2 3 2.7e-14 5.8e-11 44.2 1.1 1 45 255 298 255 299 0.98 3 3 8.6e-10 1.9e-06 29.7 2.1 2 46 308 365 307 365 0.90
Sequence Information
- Coding Sequence
- CTGGAAGCCGACCAACTTCAGCAGGCAGAAGAAGGTGACAATGGTGCTCAACACGGTCAAGCGCAacatcaacaacaacaacacgAAGATAGCCATGACAACGCTGGCCCATCccataaaagaagaaagaagaaggaTCATGCTCATCACGATACTGCGTCAAACGTTGACCCTGAACTATCGCATCTAAATGACGCAGCTGACCATGAACAATTGGTGAGAGCCGCAATCCTAGATGCTAACAAGCTGGCTGCCGATCCACATGTCAACATACAGGACTACATTCAACAACAAGATGACACAGACCCAAAACTTCCATTGGACAGCAGTCTCATTCAAGCAGCTCAAGCAGCGCAAGCATTAGCTGCAGCTGCAGCTGATGGTCGTGGAGAACAATCACAACAACACGACGCGCAAGCCCATCGTGTCCAACATCAACAAACTAGACCAACTGCTGAAGCATTACAAGCTACCGAACAAGCTGCTGCTATGGTTGCTGATGCTGCTGCTAAAGCATCTACTTGGGTTCAAAACCAACAACAAGGTAAGATGTTCTCAAAGGAGGAGACTGAAGCCATTGACAAGTTTATCAGCAAGTACTGTGAAATTCACGGTATGGACAGAAAAGACATCTGTCGTCGTGTTTGGTCGAACGAACGTAAGAAAGATGATTTCTGGGACCTGATTCACAAGGTTTTGCCTTACAGAACTCGTGCTTCAGTTTACAAGCATGTCAGAAGATCATATCACGTTTTTGAAGTTCGTGGTAAATGGACACGCGAGGAAGATCGGGAACTAGCAAGATTAGCAGCTGAAAAAGATGGTCAATGGAAGATCATTGGTCAAGAAATGAGCAGAATGCCAGAAGACTGTAGAGATAGATGGAGAAATTATGTTAAGTGTGGTAGTAATCGTGCACAAAACAAATGGACTGTTCAGGAAGAAGAAAACTTGAAGGATATTGTCAATCTTTACATGAGTGAGCAACAACAACATGGTATCCAAAACCCTGGTATTAATTGGACTGCTGTTTCTGATAAGATGGGTGGTGTCAGATCAAGAATTCAGTGTAGATACAAATggaacaaattattgaaaagagaAGCTTTGTCTAGAGCTCAAACCATTGGTATCGCCGATAGAGTTTGGTTATGTACCAAATTACAAGAATACAGACCAATTTCAGAAGATAGTATCAACTGGGATGAATTGGCTCGTTCGCACCATAAAAACTTCTGGGCAGGTAAAGATTTCCAATTGTGTTACGAGAAGATGAGATCAAGTGTTAGAGACAGTAAAAAGAAAACAGTCAACCAAGTCTGCCAAATGCTGTTACAAGATTTGATCGCTGATGCTGCCAAATCCAATAATGCTAGAGACATCGGTTTACCTGTTGTTCTGCACAATTTCAAAAACGAGAAGGTTGATGACAACCCAACTCATATCGCCTCTGCCGCTGTGAGTGCTTCGATTGATAATACTCCAGAACAAACTTACATGCAAAGCCACAATTTCTAG
- Protein Sequence
- LEADQLQQAEEGDNGAQHGQAQHQQQQHEDSHDNAGPSHKRRKKKDHAHHDTASNVDPELSHLNDAADHEQLVRAAILDANKLAADPHVNIQDYIQQQDDTDPKLPLDSSLIQAAQAAQALAAAAADGRGEQSQQHDAQAHRVQHQQTRPTAEALQATEQAAAMVADAAAKASTWVQNQQQGKMFSKEETEAIDKFISKYCEIHGMDRKDICRRVWSNERKKDDFWDLIHKVLPYRTRASVYKHVRRSYHVFEVRGKWTREEDRELARLAAEKDGQWKIIGQEMSRMPEDCRDRWRNYVKCGSNRAQNKWTVQEEENLKDIVNLYMSEQQQHGIQNPGINWTAVSDKMGGVRSRIQCRYKWNKLLKREALSRAQTIGIADRVWLCTKLQEYRPISEDSINWDELARSHHKNFWAGKDFQLCYEKMRSSVRDSKKKTVNQVCQMLLQDLIADAAKSNNARDIGLPVVLHNFKNEKVDDNPTHIASAAVSASIDNTPEQTYMQSHNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -