Pnir023808.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- Cdc5l
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010000480.1:75591-79633[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-16 4.4e-13 51.0 1.5 2 46 9 54 8 54 0.97 2 3 7.3e-12 1.6e-08 36.4 0.1 1 45 60 103 60 104 0.93 3 3 9.5 2.1e+04 -2.4 0.0 31 46 579 594 577 594 0.84
Sequence Information
- Coding Sequence
- ATGCCGCGTATTATGATAAAGGGTGGTGTCTGGCGAAACACCGAAgatgaaattttaaaagcagcTGTTATGAAATATGGTAAAAATCAATGGAGTCGTATAGCTTCCCTCCTTCACAGAAAATCTGCTAAACAGTGTAAAGCCAGATGGTTTGAGTGGCTTGATccaagtattaaaaaaacagaatgGAGCAGAGAAGAAGATGAAAAACTTTTACACTTGGCAAAATTAATGCCAACACAATGGAGAACAATAGCACCTATTATTGGTCGAACAGCAGCTCAATGTTTAGAACGTTACGAGTATTTACTGGATCAAGctcaaaaaaaagaagaaggagATGAAAGTGTTGATGATCCTAGAAAATTGAAACCTGGAGAAATAGATCCTAATCCTGAGACTAAACCGGCACGTCCAGATCCTAAAGATATGGATGAAGAtgaacTTGAAATGTTATCTGAAGCTAGAGCAAGATTAGCAAATACACAAGGAAAAAAAGCTAAAAGGAAGGCTCGTGAAAAGCAATTAGAAGAAGCTCGTAGACTTGCTGCTTTACAAAAACGAAGAGAATTAAGAGCAGCTGGTATTTCAGTGGCACAAAAGAATAAACGAAAGCGTGGAATTAATTACAACACTGAAATTCCATTTGAAAAAAAGCCAGCTCAAGGTTTTTATGATACATCCACTGAAGAGATTGATCCTCTAGCAgctgatttttcaaaattgaaacaacaaaatcaattaacttggcaagagaaagaagaaatagagagaaaaaaagacaaacaaaaattgaaacagagaaaagaaaatgatatgCCAGCTAATATGTTAAATCAGGAACccgttaaaaaaagaagtaaactCGTTCTTCCTGAACCTCAAATTTCTGATAGAGAATTGCAACAAGTTGTAAAATTGGGGCGAGCTTccgaaGCTGCTCGAGAAATCGTTTTAGAAGGTGGAAACCATTCGTCAGACAGTTTGCTAGCAGATTATTCTTTAACACCTAATACTGCAATCACTCCAAGAACTCCTGCTGCTATTGATAGAGTTTTACAAGAAGCTCAAAATGTTATGGCTCTAACACACGTTGATACTCCTCTAAAAGGTGGGATGAACACGCCACTTAACAATGCCGACTTCAGTACCGTCGTGCCGACTCCGAATGCTGTTGCTACACCTAATACAGTATTGGCTACGCCATTCAGGTCGCAAAGAAGTGACGCGTCACCGGCCCCATTCAATACACCAGGATCCGGTCGACAGCAAAATGCAACGGCTGCACAAACTCCTGTTCGCGACAAGCTGAATATTAATCCTGAGGAAGCATTGGAAGCTTCTGAGACGCCGGTTGTTCAAAAACAAACAAAAGACCAACTTCGTACGGGTTTTAGTACATTACCAACGCcaaaaaatgattatgaaatCGTTGTGCCTGAAGACGAGATAAACGAAGAAGAAACTAGTGCTTCAACAAATGATGTTGTTGAAGATCAAGCTGATGTCGATGCAAGAAAACAACAAGAATTAATAGAAcaacaaaaaattgaaCTAGCAAAACGCTCACAAGTTATTCAAAGATCACTTCCAAGGCCAAATGAAGTAAATATGAATGTTCTAAGACCTTCCACAGAAGTTTCGTTAACGGATTTACAGAAGgcagaagaattaattaaacaagaaatGATAGCGATGATGCATTATGATGCACTACATAATCCTGTACAATTAAATCATAAACGTGCacaatcaataataaatcaGGCACAAAATTATTTGGAGCACCATCCTTATGTAGAATATTCTAAAGAAGAcgttgaaaaaGCAAAAAGTATATTGATAGATGAAATGGCTGTAGTCAAAGAAGGTATGGCTCATGGAGATTTAAGTTTGGAATCTTATTGCACTGTTTGGGAAGAATGTTTATCACAAattttatatttagaatcacAGAAAAGGTATACAAGAGCTACCTTAGCATCTAAAAAAGATAGAATCGAAGCTTGTGAAAGAAAACTGGAAGAAAATCGTATGCATATGACTGGTGAAGCAAAAAGAGCagcaaaaatggaaaaaaaattaaaagtcttatTAGGAGGATATCAGaatcGAGCTCAAGTACTAATCAAACAATTTAATGACTTGACAGACCAAATTGAACAAGCTCGATTAGAATTatctactttcaaatttttgcaAACACAAGAAGAAGCTGCTATTCCAAGAAGACTTGATGCTCTGATTGAAGATGTGAATCGTCAGAAAGAAAGAGAGCATGGACTACAAATACGTTATTCtgagttaaaagaaaaattgcatgAAATGCAGATCCAGCCTTTTTAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDESVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGISVAQKNKRKRGINYNTEIPFEKKPAQGFYDTSTEEIDPLAADFSKLKQQNQLTWQEKEEIERKKDKQKLKQRKENDMPANMLNQEPVKKRSKLVLPEPQISDRELQQVVKLGRASEAAREIVLEGGNHSSDSLLADYSLTPNTAITPRTPAAIDRVLQEAQNVMALTHVDTPLKGGMNTPLNNADFSTVVPTPNAVATPNTVLATPFRSQRSDASPAPFNTPGSGRQQNATAAQTPVRDKLNINPEEALEASETPVVQKQTKDQLRTGFSTLPTPKNDYEIVVPEDEINEEETSASTNDVVEDQADVDARKQQELIEQQKIELAKRSQVIQRSLPRPNEVNMNVLRPSTEVSLTDLQKAEELIKQEMIAMMHYDALHNPVQLNHKRAQSIINQAQNYLEHHPYVEYSKEDVEKAKSILIDEMAVVKEGMAHGDLSLESYCTVWEECLSQILYLESQKRYTRATLASKKDRIEACERKLEENRMHMTGEAKRAAKMEKKLKVLLGGYQNRAQVLIKQFNDLTDQIEQARLELSTFKFLQTQEEAAIPRRLDALIEDVNRQKEREHGLQIRYSELKEKLHEMQIQPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309433;
- 90% Identity
- iTF_00707783;
- 80% Identity
- -