Pnir017311.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- rca-1_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010015609.1:1327-3240[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-18 5.2e-15 57.1 0.0 1 46 130 176 130 176 0.97 2 2 7.1e-14 1.6e-10 42.8 0.5 1 43 182 224 182 225 0.96
Sequence Information
- Coding Sequence
- ATGGAGTCCAACCAACAACATCAACAACTTCCTTCAATCCACACTATACACCCTCAACAGTTCGGCCTACACCAGCCTCCTCTGCACCACCAACAACATCTCCAACCGCAACTACAGCCACTTCAGTCCGTCTTACCGATGCAACAAGTTCCACAAGTGCAACAAGTGCAACAAATGCAAGTTCATCAGGTCCCTGTGCAACAAGTACAACAAGTACAACAACAGCAAGTCTTAGTCCAAATACCTCCTCATTTGCAACAGAAGGCTCCTCCTCCAAACCACCAATACCAACATCACCAAACTCAAAACTTACCTGGCCTACCTCCACAACCTAAACAAAATCCTCATTCCCAACAACAAATGACTAACACTGCTACCAATTTAAGAAGAGGCCCATGGTCTCAAGAGGAAGATCGTGCTTTATTAGAAGCCATCAACGTTTTTGGTCCTTCGAATTGGGTACGAATTTCTCAAGCTTTGGGCTCAAGAACTCCAAAACAATGTCGAGAGAGATATCATCAGAATCTGAAACCTTCGTTGAATAGAAACCCTATCTCTCCTGAAGAAGGTAGACTGATTGAAGAACTAGTTGGCAAATATGGGAAGAAATGGGCTGAGATTGCTAGACATTTGAATGGAAGATCAGATAATGCTATCAAAAATTGGTGGAATGGTGGTGCTAATAGAAGAAGAAGAGCATCAACTCAAGCTTTATCTGATCACAACTTAGCAATGAACCAATCTAAAGTTCAACCAGAATCAACTTCTGATCATGACCAAAAACAACCATCGTTTAATACTTCGATTTTCCAAAACCAAGGACAACGTCAACCATCTCAATCTTCAGCAACAGGCCAACTACCACACCTATCTCAACAACTGACACATTCTTCATCTTCAAATGCTCTATCCCAACTTCATCACCAGCACTCGTCCCAACAAGTCCCTCCTCCAATGCTCCCACCATTATCAAGATCCCCAAGCATATCTCAAGAACTGTTACAGCAACAACCTGGTGTGAAGAGACTTCTGGAAGAACAACATATGCTTCCAGCTAGACGCCATTCAGCACAGACTATCCTCACTACTTCCAACTCATCTTCTTCTCCATTCTCTAGAGGTGGCTCTTCACGAAATAGCTCCATCTCAATGGAATATGCTAATGGTGGTGGTAGTGCGAATACTACTGCTACAAACGGTTCAAGCACTACTGCTACAAACTCATGCTCAACAAGCAGAAGATCAAGTTTAGTCCATGATTTATTCCCAGCGTATCCACAATCTAAAAGGCAATCAATCACAAACTACATGAGTCCAAACATCTTACCGAGAGGTTCTATATCAGGCCTACCATCTGGCCTAACACCACTGTCCATTAATTCCAATACCATCGCTGCACAACAATTACCAACACCACAAATCCAATCCTCTCAAAACACTACGtcacaacaacagcaacaacatcAACCTACGATGTTCAAATCCAACTTCAACTTCTCCGCAAAAGAATCCATCAAACTCCCACCGCCTTCCTCCATCTCATCCACAAATCCAAACTTCCAAACTAGACAACCACCTATGCCAGAATACAACCGTTTTTCCGACTCATCGTTATCCAAAGTGAAATCAAGTGAATCACTAAGACATGGAATTTTCAGTGAGATCTCGAGAAAGAATTCAATCGCATCGTTAATCGCTGATAATAAATCACTATCATCAACAAATACGTCTTTAAATGAAGAATTCGTATCTCAGGGGTCTGGACAATCAGCTACACAGGTTAAGCAGGAAGGTTCTCAACCTCTACAACCTCCATCGTGTGATAGTGCGTCCACGGATGCTAGTACTGATACCATTCAGGCGGAAACGAAGGAGGAGAAGGTAAAGATGAATATATCGAATTTGTTAAGCTGA
- Protein Sequence
- MESNQQHQQLPSIHTIHPQQFGLHQPPLHHQQHLQPQLQPLQSVLPMQQVPQVQQVQQMQVHQVPVQQVQQVQQQQVLVQIPPHLQQKAPPPNHQYQHHQTQNLPGLPPQPKQNPHSQQQMTNTATNLRRGPWSQEEDRALLEAINVFGPSNWVRISQALGSRTPKQCRERYHQNLKPSLNRNPISPEEGRLIEELVGKYGKKWAEIARHLNGRSDNAIKNWWNGGANRRRRASTQALSDHNLAMNQSKVQPESTSDHDQKQPSFNTSIFQNQGQRQPSQSSATGQLPHLSQQLTHSSSSNALSQLHHQHSSQQVPPPMLPPLSRSPSISQELLQQQPGVKRLLEEQHMLPARRHSAQTILTTSNSSSSPFSRGGSSRNSSISMEYANGGGSANTTATNGSSTTATNSCSTSRRSSLVHDLFPAYPQSKRQSITNYMSPNILPRGSISGLPSGLTPLSINSNTIAAQQLPTPQIQSSQNTTSQQQQQHQPTMFKSNFNFSAKESIKLPPPSSISSTNPNFQTRQPPMPEYNRFSDSSLSKVKSSESLRHGIFSEISRKNSIASLIADNKSLSSTNTSLNEEFVSQGSGQSATQVKQEGSQPLQPPSCDSASTDASTDTIQAETKEEKVKMNISNLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -